data_SUW # _chem_comp.id SUW _chem_comp.name "ME-A-9-N-(NAPHTHYL-2-CARBONYL)-AMINO-9-DEOXY-NEU5AC" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H28 N2 O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-02-14 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 476.476 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SUW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1OD7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SUW CX1 CX1 C 0 1 N N N 61.349 25.381 16.232 1.103 0.924 -0.152 CX1 SUW 1 SUW O1A O1A O 0 1 N N N 60.566 24.732 15.487 1.806 -0.076 -0.129 O1A SUW 2 SUW O1B O1B O 0 1 N N N 61.479 25.178 17.475 -0.053 1.029 -0.852 O1B SUW 3 SUW CX2 CX2 C 0 1 N N R 62.192 26.472 15.595 1.397 2.203 0.584 CX2 SUW 4 SUW OX2 OX2 O 0 1 N N N 63.179 25.738 14.927 1.381 3.204 -0.434 OX2 SUW 5 SUW CO2 CO2 C 0 1 N N N ? ? ? 2.362 2.944 -1.424 CO2 SUW 6 SUW CX3 CX3 C 0 1 N N N 61.504 27.366 14.560 0.290 2.556 1.574 CX3 SUW 7 SUW CX4 CX4 C 0 1 N N S 60.714 28.480 15.277 0.313 1.659 2.807 CX4 SUW 8 SUW OX4 OX4 O 0 1 N N N 60.263 29.447 14.344 -0.610 2.191 3.755 OX4 SUW 9 SUW CX5 CX5 C 0 1 N N R 61.534 29.220 16.351 1.719 1.606 3.411 CX5 SUW 10 SUW NX5 NX5 N 0 1 N N N 60.621 30.165 16.974 1.761 0.640 4.486 NX5 SUW 11 SUW C10 C10 C 0 1 N N N 60.943 31.461 17.057 2.042 0.978 5.795 C10 SUW 12 SUW O10 O10 O 0 1 N N N 61.940 31.967 16.502 2.287 2.101 6.221 O10 SUW 13 SUW C11 C11 C 0 1 N N N 60.044 32.350 17.880 2.030 -0.179 6.738 C11 SUW 14 SUW CX6 CX6 C 0 1 N N R 62.105 28.170 17.328 2.761 1.277 2.330 CX6 SUW 15 SUW OX6 OX6 O 0 1 N N N 62.913 27.190 16.600 2.660 2.184 1.225 OX6 SUW 16 SUW CX7 CX7 C 0 1 N N R 62.941 28.706 18.455 4.188 1.393 2.859 CX7 SUW 17 SUW OX7 OX7 O 0 1 N N N 63.977 29.479 17.892 4.348 2.704 3.406 OX7 SUW 18 SUW CX8 CX8 C 0 1 N N R 63.623 27.589 19.254 5.265 1.176 1.787 CX8 SUW 19 SUW OX8 OX8 O 0 1 N N N 62.734 26.523 19.615 5.047 -0.097 1.170 OX8 SUW 20 SUW CX9 CX9 C 0 1 N N N 64.306 28.237 20.497 6.707 1.208 2.292 CX9 SUW 21 SUW NX6 NX6 N 0 1 N N N 65.158 27.287 21.212 6.986 0.181 3.260 NX6 SUW 22 SUW C12 C12 C 0 1 N N N 66.441 27.051 20.863 7.408 0.464 4.553 C12 SUW 23 SUW O12 O12 O 0 1 N N N 67.048 27.931 20.258 7.584 1.595 4.998 O12 SUW 24 SUW C25 C25 C 0 1 Y N N 66.420 24.737 21.933 8.591 -0.579 6.451 C25 SUW 25 SUW C26 C26 C 0 1 Y N N 67.136 25.745 21.208 7.680 -0.709 5.423 C26 SUW 26 SUW C27 C27 C 0 1 Y N N 68.487 25.486 20.831 7.013 -1.887 5.175 C27 SUW 27 SUW C28 C28 C 0 1 Y N N 69.118 24.255 21.163 7.267 -2.990 5.991 C28 SUW 28 SUW C2B C2B C 0 1 Y N N 68.412 23.251 21.881 8.186 -2.903 7.048 C2B SUW 29 SUW C21 C21 C 0 1 Y N N 69.037 22.015 22.216 8.454 -4.002 7.880 C21 SUW 30 SUW C22 C22 C 0 1 Y N N 68.311 21.028 22.936 9.371 -3.898 8.926 C22 SUW 31 SUW C23 C23 C 0 1 Y N N 66.956 21.269 23.327 10.032 -2.694 9.156 C23 SUW 32 SUW C24 C24 C 0 1 Y N N 66.322 22.499 22.997 9.778 -1.592 8.340 C24 SUW 33 SUW C2A C2A C 0 1 Y N N 67.034 23.499 22.276 8.858 -1.679 7.282 C2A SUW 34 SUW H1B H1B H 0 1 N N N 62.069 25.667 18.036 -0.261 0.204 -1.341 H1B SUW 35 SUW HO21 1HO2 H 0 0 N N N 0.786 -0.584 -0.532 3.186 3.653 -1.318 HO21 SUW 36 SUW HO22 2HO2 H 0 0 N N N -0.803 -0.353 0.688 1.912 3.037 -2.416 HO22 SUW 37 SUW HO23 3HO2 H 0 0 N N N -0.898 0.517 -0.409 2.740 1.927 -1.292 HO23 SUW 38 SUW HX31 1HX3 H 0 0 N N N 62.264 27.819 13.906 -0.698 2.515 1.097 HX31 SUW 39 SUW HX32 2HX3 H 0 0 N N N 60.812 26.759 13.958 0.405 3.602 1.892 HX32 SUW 40 SUW HX4 HX4 H 0 1 N N N 59.873 27.970 15.770 -0.032 0.652 2.546 HX4 SUW 41 SUW HA HA H 0 1 N N N 59.273 29.459 14.333 -0.820 3.091 3.461 HA SUW 42 SUW HX5 HX5 H 0 1 N N N 62.396 29.777 15.954 1.947 2.578 3.869 HX5 SUW 43 SUW HB HB H 0 1 N N N 59.753 29.846 17.340 1.575 -0.334 4.267 HB SUW 44 SUW H111 1H11 H 0 0 N N N 59.375 31.729 18.493 2.997 -0.316 7.249 H111 SUW 45 SUW H112 2H11 H 0 0 N N N 60.658 32.985 18.536 1.289 -0.057 7.544 H112 SUW 46 SUW H113 3H11 H 0 0 N N N 59.444 32.985 17.211 1.803 -1.156 6.282 H113 SUW 47 SUW HX6 HX6 H 0 1 N N N 61.210 27.725 17.788 2.626 0.252 1.963 HX6 SUW 48 SUW HX7 HX7 H 0 1 N N N 62.279 29.277 19.123 4.328 0.696 3.691 HX7 SUW 49 SUW HC HC H 0 1 N N N 64.669 28.880 17.516 5.289 2.799 3.613 HC SUW 50 SUW HX8 HX8 H 0 1 N N N 64.379 27.106 18.617 5.156 1.924 0.992 HX8 SUW 51 SUW HD HD H 0 1 N N N 61.797 26.825 19.513 4.231 -0.012 0.657 HD SUW 52 SUW HX91 1HX9 H 0 0 N N N 64.922 29.084 20.162 7.404 1.046 1.463 HX91 SUW 53 SUW HX92 2HX9 H 0 0 N N N 63.514 28.568 21.185 6.944 2.171 2.755 HX92 SUW 54 SUW HE HE H 0 1 N N N 64.776 26.794 21.988 6.925 -0.786 2.947 HE SUW 55 SUW H25 H25 H 0 1 N N N 65.414 24.917 22.219 9.102 0.367 6.621 H25 SUW 56 SUW H27 H27 H 0 1 N N N 69.030 26.223 20.294 6.297 -1.980 4.362 H27 SUW 57 SUW H28 H28 H 0 1 N N N 70.124 24.084 20.872 6.738 -3.921 5.793 H28 SUW 58 SUW H21 H21 H 0 1 N N N 70.042 21.832 21.928 7.949 -4.953 7.719 H21 SUW 59 SUW H22 H22 H 0 1 N N N 68.776 20.107 23.185 9.568 -4.756 9.562 H22 SUW 60 SUW H23 H23 H 0 1 N N N 66.421 20.527 23.866 10.745 -2.614 9.970 H23 SUW 61 SUW H24 H24 H 0 1 N N N 65.316 22.671 23.289 10.306 -0.661 8.538 H24 SUW 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SUW CX1 O1A DOUB N N 1 SUW CX1 O1B SING N N 2 SUW CX1 CX2 SING N N 3 SUW O1B H1B SING N N 4 SUW CX2 OX2 SING N N 5 SUW CX2 CX3 SING N N 6 SUW CX2 OX6 SING N N 7 SUW OX2 CO2 SING N N 8 SUW CO2 HO21 SING N N 9 SUW CO2 HO22 SING N N 10 SUW CO2 HO23 SING N N 11 SUW CX3 CX4 SING N N 12 SUW CX3 HX31 SING N N 13 SUW CX3 HX32 SING N N 14 SUW CX4 OX4 SING N N 15 SUW CX4 CX5 SING N N 16 SUW CX4 HX4 SING N N 17 SUW OX4 HA SING N N 18 SUW CX5 NX5 SING N N 19 SUW CX5 CX6 SING N N 20 SUW CX5 HX5 SING N N 21 SUW NX5 C10 SING N N 22 SUW NX5 HB SING N N 23 SUW C10 O10 DOUB N N 24 SUW C10 C11 SING N N 25 SUW C11 H111 SING N N 26 SUW C11 H112 SING N N 27 SUW C11 H113 SING N N 28 SUW CX6 OX6 SING N N 29 SUW CX6 CX7 SING N N 30 SUW CX6 HX6 SING N N 31 SUW CX7 OX7 SING N N 32 SUW CX7 CX8 SING N N 33 SUW CX7 HX7 SING N N 34 SUW OX7 HC SING N N 35 SUW CX8 OX8 SING N N 36 SUW CX8 CX9 SING N N 37 SUW CX8 HX8 SING N N 38 SUW OX8 HD SING N N 39 SUW CX9 NX6 SING N N 40 SUW CX9 HX91 SING N N 41 SUW CX9 HX92 SING N N 42 SUW NX6 C12 SING N N 43 SUW NX6 HE SING N N 44 SUW C12 O12 DOUB N N 45 SUW C12 C26 SING N N 46 SUW C25 C26 DOUB Y N 47 SUW C25 C2A SING Y N 48 SUW C25 H25 SING N N 49 SUW C26 C27 SING Y N 50 SUW C27 C28 DOUB Y N 51 SUW C27 H27 SING N N 52 SUW C28 C2B SING Y N 53 SUW C28 H28 SING N N 54 SUW C2B C21 DOUB Y N 55 SUW C2B C2A SING Y N 56 SUW C21 C22 SING Y N 57 SUW C21 H21 SING N N 58 SUW C22 C23 DOUB Y N 59 SUW C22 H22 SING N N 60 SUW C23 C24 SING Y N 61 SUW C23 H23 SING N N 62 SUW C24 C2A DOUB Y N 63 SUW C24 H24 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SUW SMILES ACDLabs 10.04 "O=C(c2cc1ccccc1cc2)NCC(O)C(O)C3OC(OC)(C(=O)O)CC(O)C3NC(=O)C" SUW SMILES_CANONICAL CACTVS 3.341 "CO[C@@]1(C[C@H](O)[C@@H](NC(C)=O)[C@@H](O1)[C@H](O)[C@H](O)CNC(=O)c2ccc3ccccc3c2)C(O)=O" SUW SMILES CACTVS 3.341 "CO[C]1(C[CH](O)[CH](NC(C)=O)[CH](O1)[CH](O)[CH](O)CNC(=O)c2ccc3ccccc3c2)C(O)=O" SUW SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)N[C@@H]1[C@H](C[C@@](O[C@H]1[C@@H]([C@@H](CNC(=O)c2ccc3ccccc3c2)O)O)(C(=O)O)OC)O" SUW SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)NC1C(CC(OC1C(C(CNC(=O)c2ccc3ccccc3c2)O)O)(C(=O)O)OC)O" SUW InChI InChI 1.03 "InChI=1S/C23H28N2O9/c1-12(26)25-18-16(27)10-23(33-2,22(31)32)34-20(18)19(29)17(28)11-24-21(30)15-8-7-13-5-3-4-6-14(13)9-15/h3-9,16-20,27-29H,10-11H2,1-2H3,(H,24,30)(H,25,26)(H,31,32)/t16-,17+,18+,19+,20+,23+/m0/s1" SUW InChIKey InChI 1.03 NCJJDBXUFQPTHE-GCIBVHORSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SUW "SYSTEMATIC NAME" ACDLabs 10.04 "methyl 5-(acetylamino)-3,5,9-trideoxy-9-[(naphthalen-2-ylcarbonyl)amino]-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid" SUW "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,4S,5R,6R)-5-acetamido-6-[(1R,2R)-1,2-dihydroxy-3-(naphthalen-2-ylcarbonylamino)propyl]-4-hydroxy-2-methoxy-oxane-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SUW "Create component" 2003-02-14 EBI SUW "Modify descriptor" 2011-06-04 RCSB #