data_SVA
# 
_chem_comp.id                                    SVA 
_chem_comp.name                                  "SERINE VANADATE" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C3 H7 N O7 V" 
_chem_comp.mon_nstd_parent_comp_id               SER 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    -3 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        220.032 
_chem_comp.one_letter_code                       S 
_chem_comp.three_letter_code                     SVA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   Y 
_chem_comp.pdbx_model_coordinates_db_code        1B8J 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SVA N   N   N 0  1 N N N Y Y N 76.995 37.355 41.312 2.321  1.882  0.179  N   SVA 1  
SVA CA  CA  C 0  1 N N S Y N N 76.999 38.494 40.430 2.159  0.471  0.555  CA  SVA 2  
SVA CB  CB  C 0  1 N N N N N N 76.239 39.648 41.108 0.818  -0.046 0.029  CB  SVA 3  
SVA OG  OG  O 0  1 N N N N N N 75.006 39.147 41.456 -0.248 0.644  0.684  OG  SVA 4  
SVA C   C   C 0  1 N N N Y N Y 78.430 38.947 40.072 3.280  -0.340 -0.043 C   SVA 5  
SVA O   O   O 0  1 N N N Y N Y 78.678 39.442 38.982 3.905  0.094  -0.981 O   SVA 6  
SVA V   V   V 0  1 N N N N N N 74.507 39.202 43.102 -1.817 -0.032 0.000  V   SVA 7  
SVA O1  O1  O -1 1 N N N N N N 74.848 40.929 43.298 -3.386 -0.708 -0.683 O1  SVA 8  
SVA O2  O2  O -1 1 N N N N N N 73.082 38.728 42.265 -2.778 1.100  1.086  O2  SVA 9  
SVA O3  O3  O -1 1 N N N N N N 75.630 38.025 43.663 -1.318 0.513  -1.685 O3  SVA 10 
SVA O4  O4  O 0  1 N N N N N N 73.781 39.054 44.874 -1.356 -1.710 0.599  O4  SVA 11 
SVA OXT OXT O 0  1 N Y N Y N Y 79.392 38.692 40.944 3.583  -1.544 0.467  OXT SVA 12 
SVA H   H   H 0  1 N N N Y Y N 77.498 36.590 40.862 3.254  2.150  0.453  H   SVA 13 
SVA H2  HN2 H 0  1 N Y N Y Y N 76.053 37.086 41.598 2.292  1.918  -0.829 H2  SVA 14 
SVA HA  HA  H 0  1 N N N Y N N 76.499 38.200 39.477 2.183  0.379  1.641  HA  SVA 15 
SVA HB2 1HB H 0  1 N N N N N N 76.791 40.098 41.965 0.758  0.127  -1.045 HB2 SVA 16 
SVA HB3 2HB H 0  1 N N N N N N 76.182 40.568 40.481 0.737  -1.115 0.230  HB3 SVA 17 
SVA HO4 HO4 H 0  1 N N N N N N 73.505 39.084 45.782 ?      ?      ?      HO4 SVA 18 
SVA HXT HXT H 0  1 N Y N Y N Y 80.273 38.970 40.723 4.302  -2.064 0.083  HXT SVA 19 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SVA N   CA  SING N N 1  
SVA N   H   SING N N 2  
SVA N   H2  SING N N 3  
SVA CA  CB  SING N N 4  
SVA CA  C   SING N N 5  
SVA CA  HA  SING N N 6  
SVA CB  OG  SING N N 7  
SVA CB  HB2 SING N N 8  
SVA CB  HB3 SING N N 9  
SVA OG  V   SING N N 10 
SVA C   O   DOUB N N 11 
SVA C   OXT SING N N 12 
SVA V   O1  SING N N 13 
SVA V   O2  SING N N 14 
SVA V   O3  SING N N 15 
SVA V   O4  SING N N 16 
SVA O4  HO4 SING N N 17 
SVA OXT HXT SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SVA SMILES           ACDLabs              10.04 "[O-][V]([O-])([O-])(O)OCC(N)C(=O)O"                                                                           
SVA SMILES_CANONICAL CACTVS               3.341 "N[C@@H](CO[V](O)([O-])([O-])[O-])C(O)=O"                                                                      
SVA SMILES           CACTVS               3.341 "N[CH](CO[V](O)([O-])([O-])[O-])C(O)=O"                                                                        
SVA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H](C(=O)O)N)O[V](O)([O-])([O-])[O-]"                                                                    
SVA SMILES           "OpenEye OEToolkits" 1.5.0 "C(C(C(=O)O)N)O[V](O)([O-])([O-])[O-]"                                                                         
SVA InChI            InChI                1.03  "InChI=1S/C3H6NO3.H2O.3O.V/c4-2(1-5)3(6)7;;;;;/h2H,1,4H2,(H,6,7);1H2;;;;/q-1;;3*-1;+2/p-1/t2-;;;;;/m0...../s1" 
SVA InChIKey         InChI                1.03  SYKYEBJDHHGBFL-PUAMRSTPSA-M                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SVA "SYSTEMATIC NAME" ACDLabs              10.04 "For multi-component charged structures, a total zero charge is required!" 
SVA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2S)-2-amino-3-hydroxy-3-oxo-propoxy]-hydroxy-trioxido-vanadium"         
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SVA "Create component"  1999-07-08 EBI  
SVA "Modify descriptor" 2011-06-04 RCSB 
SVA "Modify backbone"   2023-11-03 PDBE 
SVA "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            SVA 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
#