data_SVW # _chem_comp.id SVW _chem_comp.name "O-[(R)-AMINO(HYDROXY)PHOSPHORYL]-L-SERINE" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C3 H9 N2 O5 P" _chem_comp.mon_nstd_parent_comp_id SER _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-02-13 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 184.088 _chem_comp.one_letter_code S _chem_comp.three_letter_code SVW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2JGJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SVW N N N 0 1 N N N N N N 25.587 12.148 14.330 -4.196 -3.250 0.458 N SVW 1 SVW CA CA C 0 1 N N S N N N 26.686 12.449 13.390 -3.132 -2.432 0.986 CA SVW 2 SVW C C C 0 1 N N N N N N 27.940 11.559 13.641 -1.833 -3.176 0.756 C SVW 3 SVW O O O 0 1 N N N N N N 27.858 10.329 13.438 -1.696 -4.391 0.820 O SVW 4 SVW CB CB C 0 1 N N N N N N 26.990 13.951 13.362 -3.327 -2.145 2.468 CB SVW 5 SVW OG OG O 0 1 N N N N N N 27.744 14.305 12.202 -2.231 -1.372 2.942 OG SVW 6 SVW O3 O3 O 0 1 N N N N N N 29.573 14.827 11.035 -0.839 -0.299 4.843 O3 SVW 7 SVW P1 P1 P 0 1 N N R N N N 28.867 15.393 12.248 -2.170 -0.914 4.498 P1 SVW 8 SVW O4 O4 O 0 1 N N N N N N 29.498 15.203 13.616 -2.392 -2.325 5.272 O4 SVW 9 SVW N2 N2 N 0 1 N N N N N N 28.865 17.115 11.964 -3.507 0.008 4.807 N2 SVW 10 SVW OXT OXT O 0 1 N Y N N N N 29.069 12.146 14.070 -0.800 -2.329 0.510 OXT SVW 11 SVW HBC1 1HBC H 0 0 N N N N N N 27.497 14.284 14.297 -3.359 -3.073 3.047 HBC1 SVW 12 SVW HBC2 2HBC H 0 0 N N N N N N 26.059 14.559 13.447 -4.254 -1.589 2.652 HBC2 SVW 13 SVW H4 H4 H 0 1 N N N N N N 30.180 15.864 13.644 -1.650 -2.698 5.795 H4 SVW 14 SVW H2N1 1H2N H 0 0 N N N N N N 28.148 17.471 12.596 -3.698 0.238 5.782 H2N1 SVW 15 SVW H2N2 2H2N H 0 0 N N N N N N 29.597 17.824 11.994 -3.595 0.884 4.294 H2N2 SVW 16 SVW HXT HXT H 0 1 N N N N N N 25.049 11.365 14.321 0.073 -2.759 0.387 HXT SVW 17 SVW HN1 HN1 H 0 1 N N N N N N 25.951 12.080 15.259 -4.324 -4.178 0.824 HN1 SVW 18 SVW HN2 HN2 H 0 1 N N N N N N 24.906 12.880 14.292 -4.653 -2.966 -0.392 HN2 SVW 19 SVW HC HC H 0 1 N N N N N N 26.349 12.183 12.377 -3.149 -1.514 0.389 HC SVW 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SVW N HN1 SING N N 1 SVW N HN2 SING N N 2 SVW CA HC SING N N 3 SVW N CA SING N N 4 SVW CA C SING N N 5 SVW C O DOUB N N 6 SVW CA CB SING N N 7 SVW CB OG SING N N 8 SVW OG P1 SING N N 9 SVW O3 P1 DOUB N N 10 SVW P1 O4 SING N N 11 SVW P1 N2 SING N N 12 SVW C OXT SING N N 13 SVW CB HBC1 SING N N 14 SVW CB HBC2 SING N N 15 SVW O4 H4 SING N N 16 SVW N2 H2N1 SING N N 17 SVW N2 H2N2 SING N N 18 SVW OXT HXT SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SVW SMILES ACDLabs 10.04 "O=P(O)(OCC(C(=O)O)N)N" SVW SMILES_CANONICAL CACTVS 3.341 "N[C@@H](CO[P@@](N)(O)=O)C(O)=O" SVW SMILES CACTVS 3.341 "N[CH](CO[P](N)(O)=O)C(O)=O" SVW SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H](C(=O)O)N)O[P@@](=O)(N)O" SVW SMILES "OpenEye OEToolkits" 1.5.0 "C(C(C(=O)O)N)OP(=O)(N)O" SVW InChI InChI 1.03 "InChI=1S/C3H9N2O5P/c4-2(3(6)7)1-10-11(5,8)9/h2H,1,4H2,(H,6,7)(H3,5,8,9)/t2-/m0/s1" SVW InChIKey InChI 1.03 MSLTYEXLEBVFLN-REOHCLBHSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SVW "SYSTEMATIC NAME" ACDLabs 10.04 "O-[(R)-amino(hydroxy)phosphoryl]-L-serine" SVW "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-3-(amino-hydroxy-phosphoryl)oxy-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SVW "Modify model coordinates code" 2011-05-03 EBI SVW "Modify leaving atom flag" 2011-05-03 EBI SVW "Modify linking type" 2011-05-03 EBI SVW "Modify internal type" 2011-05-03 EBI SVW "Modify parent residue" 2011-05-03 EBI SVW "Modify processing site" 2011-05-03 EBI SVW "Modify one letter code" 2011-05-03 EBI SVW "Other modification" 2011-05-03 EBI SVW "Modify linking type" 2011-05-05 EBI SVW "Modify descriptor" 2011-06-04 RCSB SVW "Modify PCM" 2024-09-27 PDBE #