data_SW6 # _chem_comp.id SW6 _chem_comp.name "2-[4-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-3-methyl-5-propanoyl-thiophen-2-yl]ethyl dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H22 N3 O5 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-19 _chem_comp.pdbx_modified_date 2023-06-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 399.402 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SW6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BZX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SW6 C10 C1 C 0 1 Y N N 39.578 51.812 77.084 -1.334 -0.854 -1.041 C10 SW6 1 SW6 C13 C2 C 0 1 N N N 42.687 54.231 76.460 -2.544 -3.546 1.393 C13 SW6 2 SW6 C17 C3 C 0 1 Y N N 38.999 52.972 79.140 0.893 -1.369 -0.910 C17 SW6 3 SW6 C26 C4 C 0 1 N N N 37.341 51.032 78.371 0.273 0.521 -2.419 C26 SW6 4 SW6 C02 C5 C 0 1 Y N N 40.992 48.969 77.061 -3.864 1.946 -0.839 C02 SW6 5 SW6 C04 C6 C 0 1 Y N N 40.192 46.854 77.505 -3.397 3.017 1.143 C04 SW6 6 SW6 C05 C7 C 0 1 N N N 40.419 45.434 78.048 -3.704 4.129 2.112 C05 SW6 7 SW6 C07 C8 C 0 1 Y N N 38.733 48.381 76.541 -2.127 1.176 0.602 C07 SW6 8 SW6 C08 C9 C 0 1 Y N N 39.728 49.341 76.536 -2.845 1.031 -0.569 C08 SW6 9 SW6 C09 C10 C 0 1 N N N 39.426 50.764 75.958 -2.536 -0.088 -1.530 C09 SW6 10 SW6 C11 C11 C 0 1 Y N N 40.625 52.790 77.253 -1.412 -1.895 -0.152 C11 SW6 11 SW6 C12 C12 C 0 1 N N N 41.805 52.985 76.289 -2.601 -2.391 0.427 C12 SW6 12 SW6 C14 C13 C 0 1 N N N 44.099 53.997 75.931 -3.959 -3.883 1.870 C14 SW6 13 SW6 C18 C14 C 0 1 N N N 38.229 53.379 80.402 2.366 -1.257 -1.207 C18 SW6 14 SW6 C19 C15 C 0 1 N N N 38.941 52.973 81.688 3.015 -0.293 -0.211 C19 SW6 15 SW6 C25 C16 C 0 1 Y N N 38.583 51.920 78.243 -0.051 -0.582 -1.445 C25 SW6 16 SW6 N01 N1 N 0 1 N N N 42.111 49.905 77.070 -4.614 1.842 -2.000 N01 SW6 17 SW6 N03 N2 N 0 1 Y N N 41.182 47.732 77.519 -4.108 2.915 0.038 N03 SW6 18 SW6 N06 N3 N 0 1 Y N N 38.993 47.171 77.033 -2.426 2.172 1.424 N06 SW6 19 SW6 O15 O1 O 0 1 N N N 42.014 52.200 75.421 -3.670 -1.886 0.147 O15 SW6 20 SW6 O20 O2 O 0 1 N N N 38.359 53.724 82.720 4.412 -0.187 -0.492 O20 SW6 21 SW6 O22 O3 O 0 1 N N N 40.061 52.856 84.371 5.505 0.189 1.870 O22 SW6 22 SW6 O23 O4 O 0 1 N N N 38.354 54.490 85.177 6.872 0.722 -0.311 O23 SW6 23 SW6 O24 O5 O 0 1 N N N 40.187 55.263 83.709 4.896 2.132 0.379 O24 SW6 24 SW6 P21 P1 P 0 1 N N N 39.281 54.107 84.039 5.410 0.745 0.362 P21 SW6 25 SW6 S16 S1 S 0 1 Y N N 40.386 53.668 78.619 0.205 -2.515 0.150 S16 SW6 26 SW6 H131 H1 H 0 0 N N N 42.744 54.484 77.529 -2.112 -4.415 0.896 H131 SW6 27 SW6 H132 H2 H 0 0 N N N 42.233 55.068 75.909 -1.928 -3.273 2.250 H132 SW6 28 SW6 H261 H3 H 0 0 N N N 37.593 50.129 78.946 0.535 1.425 -1.870 H261 SW6 29 SW6 H262 H4 H 0 0 N N N 36.546 51.587 78.890 1.113 0.219 -3.044 H262 SW6 30 SW6 H263 H5 H 0 0 N N N 36.992 50.743 77.369 -0.595 0.717 -3.048 H263 SW6 31 SW6 H052 H6 H 0 0 N N N 39.489 44.853 77.958 -4.448 3.789 2.832 H052 SW6 32 SW6 H053 H7 H 0 0 N N N 41.215 44.943 77.469 -2.793 4.415 2.638 H053 SW6 33 SW6 H051 H8 H 0 0 N N N 40.715 45.489 79.106 -4.093 4.989 1.566 H051 SW6 34 SW6 H071 H9 H 0 0 N N N 37.753 48.610 76.149 -1.328 0.490 0.842 H071 SW6 35 SW6 H092 H10 H 0 0 N N N 40.134 50.990 75.147 -2.327 0.327 -2.516 H092 SW6 36 SW6 H091 H11 H 0 0 N N N 38.399 50.792 75.566 -3.393 -0.760 -1.593 H091 SW6 37 SW6 H142 H12 H 0 0 N N N 44.699 54.908 76.070 -3.918 -4.719 2.568 H142 SW6 38 SW6 H141 H13 H 0 0 N N N 44.563 53.165 76.481 -4.391 -3.015 2.367 H141 SW6 39 SW6 H143 H14 H 0 0 N N N 44.053 53.749 74.860 -4.575 -4.156 1.013 H143 SW6 40 SW6 H181 H15 H 0 0 N N N 38.104 54.472 80.400 2.831 -2.239 -1.117 H181 SW6 41 SW6 H182 H16 H 0 0 N N N 37.240 52.897 80.381 2.505 -0.880 -2.220 H182 SW6 42 SW6 H192 H17 H 0 0 N N N 38.803 51.898 81.876 2.551 0.689 -0.300 H192 SW6 43 SW6 H191 H18 H 0 0 N N N 40.015 53.197 81.614 2.876 -0.670 0.803 H191 SW6 44 SW6 H011 H19 H 0 0 N N N 42.921 49.454 77.445 -5.271 2.522 -2.215 H011 SW6 45 SW6 H012 H20 H 0 0 N N N 42.301 50.206 76.136 -4.481 1.089 -2.597 H012 SW6 46 SW6 H1 H21 H 0 1 N N N 40.992 53.036 84.308 5.835 -0.718 1.935 H1 SW6 47 SW6 H2 H22 H 0 1 N N N 38.536 55.382 85.448 7.527 1.263 0.152 H2 SW6 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SW6 O15 C12 DOUB N N 1 SW6 C14 C13 SING N N 2 SW6 C09 C08 SING N N 3 SW6 C09 C10 SING N N 4 SW6 C12 C13 SING N N 5 SW6 C12 C11 SING N N 6 SW6 C08 C07 DOUB Y N 7 SW6 C08 C02 SING Y N 8 SW6 C07 N06 SING Y N 9 SW6 N06 C04 DOUB Y N 10 SW6 C02 N01 SING N N 11 SW6 C02 N03 DOUB Y N 12 SW6 C10 C11 DOUB Y N 13 SW6 C10 C25 SING Y N 14 SW6 C11 S16 SING Y N 15 SW6 C04 N03 SING Y N 16 SW6 C04 C05 SING N N 17 SW6 C25 C26 SING N N 18 SW6 C25 C17 DOUB Y N 19 SW6 S16 C17 SING Y N 20 SW6 C17 C18 SING N N 21 SW6 C18 C19 SING N N 22 SW6 C19 O20 SING N N 23 SW6 O20 P21 SING N N 24 SW6 O24 P21 DOUB N N 25 SW6 P21 O22 SING N N 26 SW6 P21 O23 SING N N 27 SW6 C13 H131 SING N N 28 SW6 C13 H132 SING N N 29 SW6 C26 H261 SING N N 30 SW6 C26 H262 SING N N 31 SW6 C26 H263 SING N N 32 SW6 C05 H052 SING N N 33 SW6 C05 H053 SING N N 34 SW6 C05 H051 SING N N 35 SW6 C07 H071 SING N N 36 SW6 C09 H092 SING N N 37 SW6 C09 H091 SING N N 38 SW6 C14 H142 SING N N 39 SW6 C14 H141 SING N N 40 SW6 C14 H143 SING N N 41 SW6 C18 H181 SING N N 42 SW6 C18 H182 SING N N 43 SW6 C19 H192 SING N N 44 SW6 C19 H191 SING N N 45 SW6 N01 H011 SING N N 46 SW6 N01 H012 SING N N 47 SW6 O22 H1 SING N N 48 SW6 O23 H2 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SW6 InChI InChI 1.06 "InChI=1S/C16H22N3O5PS/c1-4-13(20)15-12(7-11-8-18-10(3)19-16(11)17)9(2)14(26-15)5-6-24-25(21,22)23/h8H,4-7H2,1-3H3,(H2,17,18,19)(H2,21,22,23)" SW6 InChIKey InChI 1.06 UPALPHQNKOKTHW-UHFFFAOYSA-N SW6 SMILES_CANONICAL CACTVS 3.385 "CCC(=O)c1sc(CCO[P](O)(O)=O)c(C)c1Cc2cnc(C)nc2N" SW6 SMILES CACTVS 3.385 "CCC(=O)c1sc(CCO[P](O)(O)=O)c(C)c1Cc2cnc(C)nc2N" SW6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)c1c(c(c(s1)CCOP(=O)(O)O)C)Cc2cnc(nc2N)C" SW6 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)c1c(c(c(s1)CCOP(=O)(O)O)C)Cc2cnc(nc2N)C" # _pdbx_chem_comp_identifier.comp_id SW6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[4-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-3-methyl-5-propanoyl-thiophen-2-yl]ethyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SW6 "Create component" 2022-12-19 PDBE SW6 "Initial release" 2023-06-14 RCSB #