data_SYC # _chem_comp.id SYC _chem_comp.name "(pyridin-2-ylmethyl)phosphonic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H8 N O3 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-09-14 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 173.106 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SYC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3ANL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SYC C1 C1 C 0 1 Y N N -11.410 16.065 13.664 2.703 -1.181 0.228 C1 SYC 1 SYC N2 N2 N 0 1 Y N N -12.365 15.851 14.572 1.497 -1.174 -0.304 N2 SYC 2 SYC C3 C3 C 0 1 Y N N -12.202 14.948 15.564 0.891 -0.050 -0.632 C3 SYC 3 SYC C4 C4 C 0 1 Y N N -11.004 14.229 15.721 1.506 1.171 -0.428 C4 SYC 4 SYC C5 C5 C 0 1 Y N N -10.000 14.458 14.782 2.775 1.203 0.129 C5 SYC 5 SYC C6 C6 C 0 1 Y N N -10.219 15.373 13.751 3.380 0.001 0.462 C6 SYC 6 SYC C11 C11 C 0 1 N N N -13.328 14.740 16.524 -0.489 -0.097 -1.238 C11 SYC 7 SYC P12 P12 P 0 1 N N N -14.272 13.202 16.179 -1.737 -0.030 0.089 P12 SYC 8 SYC O15 O15 O 0 1 N N N -15.346 12.994 17.259 -1.482 -1.117 1.061 O15 SYC 9 SYC O16 O16 O 0 1 N N N -13.231 11.968 16.198 -1.649 1.392 0.838 O16 SYC 10 SYC O17 O17 O 0 1 N N N -14.787 13.036 14.706 -3.205 -0.213 -0.546 O17 SYC 11 SYC H1 H1 H 0 1 N N N -11.568 16.775 12.866 3.166 -2.122 0.488 H1 SYC 12 SYC H4 H4 H 0 1 N N N -10.868 13.530 16.533 1.004 2.088 -0.700 H4 SYC 13 SYC H5 H5 H 0 1 N N N -9.060 13.931 14.852 3.280 2.142 0.300 H5 SYC 14 SYC H6 H6 H 0 1 N N N -9.448 15.541 13.013 4.368 -0.012 0.898 H6 SYC 15 SYC H11 H11 H 0 1 N N N -12.912 14.673 17.540 -0.622 0.754 -1.905 H11 SYC 16 SYC H11A H11A H 0 0 N N N -14.015 15.595 16.446 -0.607 -1.022 -1.802 H11A SYC 17 SYC HO16 HO16 H 0 0 N N N -13.484 11.350 16.874 -1.806 2.151 0.260 HO16 SYC 18 SYC HO17 HO17 H 0 0 N N N -15.713 12.826 14.716 -3.921 -0.187 0.104 HO17 SYC 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SYC C1 N2 DOUB Y N 1 SYC C1 C6 SING Y N 2 SYC N2 C3 SING Y N 3 SYC C3 C4 DOUB Y N 4 SYC C3 C11 SING N N 5 SYC C4 C5 SING Y N 6 SYC C5 C6 DOUB Y N 7 SYC C11 P12 SING N N 8 SYC P12 O15 DOUB N N 9 SYC P12 O16 SING N N 10 SYC P12 O17 SING N N 11 SYC C1 H1 SING N N 12 SYC C4 H4 SING N N 13 SYC C5 H5 SING N N 14 SYC C6 H6 SING N N 15 SYC C11 H11 SING N N 16 SYC C11 H11A SING N N 17 SYC O16 HO16 SING N N 18 SYC O17 HO17 SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SYC SMILES ACDLabs 12.01 "O=P(O)(O)Cc1ncccc1" SYC SMILES_CANONICAL CACTVS 3.370 "O[P](O)(=O)Cc1ccccn1" SYC SMILES CACTVS 3.370 "O[P](O)(=O)Cc1ccccn1" SYC SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccnc(c1)CP(=O)(O)O" SYC SMILES "OpenEye OEToolkits" 1.7.0 "c1ccnc(c1)CP(=O)(O)O" SYC InChI InChI 1.03 "InChI=1S/C6H8NO3P/c8-11(9,10)5-6-3-1-2-4-7-6/h1-4H,5H2,(H2,8,9,10)" SYC InChIKey InChI 1.03 WVWCWWLEFNGDBC-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SYC "SYSTEMATIC NAME" ACDLabs 12.01 "(pyridin-2-ylmethyl)phosphonic acid" SYC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "pyridin-2-ylmethylphosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SYC "Create component" 2010-09-14 PDBJ SYC "Modify aromatic_flag" 2011-06-04 RCSB SYC "Modify descriptor" 2011-06-04 RCSB #