data_SYU # _chem_comp.id SYU _chem_comp.name "3-[[2,4-bis(trifluoromethyl)phenyl]methyl]-5-(hydroxymethyl)-1~{H}-imidazole-2-thione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H10 F6 N2 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-20 _chem_comp.pdbx_modified_date 2024-07-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 356.287 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SYU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8C0S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SYU C13 C1 C 0 1 N N N N N N 17.182 0.132 -5.186 -4.799 -1.852 1.504 C13 SYU 1 SYU C12 C2 C 0 1 N N N N N N 20.089 -8.853 -3.678 3.745 -1.864 -0.072 C12 SYU 2 SYU C10 C3 C 0 1 Y N N N N N 21.031 -6.828 -2.500 2.546 0.316 0.195 C10 SYU 3 SYU C01 C4 C 0 1 N N N N N N 20.720 -3.040 -2.833 -1.108 1.266 0.134 C01 SYU 4 SYU N01 N1 N 0 1 N N N N N N 19.428 -0.100 -4.393 -3.944 -0.798 -0.688 N01 SYU 5 SYU O01 O1 O 0 1 N N N N N N 17.536 1.356 -4.560 -6.122 -1.312 1.462 O01 SYU 6 SYU C02 C5 C 0 1 N N N N N N 18.248 -0.707 -4.548 -3.877 -0.988 0.683 C02 SYU 7 SYU N02 N2 N 0 1 N N N N N N 19.901 -2.030 -3.494 -2.267 0.374 0.071 N02 SYU 8 SYU S02 S1 S 0 1 N N N N N N 21.828 -0.067 -3.726 -2.607 0.579 -2.631 S02 SYU 9 SYU C03 C6 C 0 1 N N N N N N 18.408 -1.971 -3.969 -2.856 -0.275 1.145 C03 SYU 10 SYU C04 C7 C 0 1 Y N N N N N 20.215 -7.319 -3.512 2.480 -1.048 -0.016 C04 SYU 11 SYU C05 C8 C 0 1 N N N N N N 20.401 -0.744 -3.834 -2.950 0.040 -1.043 C05 SYU 12 SYU C06 C9 C 0 1 Y N N N N N 21.203 -5.458 -2.279 1.385 1.065 0.247 C06 SYU 13 SYU C07 C10 C 0 1 Y N N N N N 20.514 -4.542 -3.108 0.158 0.450 0.079 C07 SYU 14 SYU C08 C11 C 0 1 Y N N N N N 19.686 -5.024 -4.134 0.092 -0.914 -0.139 C08 SYU 15 SYU C09 C12 C 0 1 Y N N N N N 19.539 -6.401 -4.335 1.252 -1.664 -0.178 C09 SYU 16 SYU C11 C13 C 0 1 N N N N N N 22.154 -5.068 -1.101 1.456 2.551 0.484 C11 SYU 17 SYU F01 F1 F 0 1 N N N N N N 21.427 -5.033 0.048 0.835 2.861 1.698 F01 SYU 18 SYU F02 F2 F 0 1 N N N N N N 23.119 -6.039 -0.967 2.796 2.952 0.530 F02 SYU 19 SYU F03 F3 F 0 1 N N N N N N 22.782 -3.847 -1.190 0.805 3.221 -0.558 F03 SYU 20 SYU F13 F4 F 0 1 N N N N N N 21.078 -9.347 -4.490 3.555 -2.963 -0.917 F13 SYU 21 SYU F14 F5 F 0 1 N N N N N N 18.886 -9.134 -4.237 4.790 -1.073 -0.562 F14 SYU 22 SYU F15 F6 F 0 1 N N N N N N 20.093 -9.526 -2.480 4.065 -2.316 1.214 F15 SYU 23 SYU H1 H1 H 0 1 N N N N N N 16.168 -0.200 -4.920 -4.450 -1.877 2.537 H1 SYU 24 SYU H2 H2 H 0 1 N N N N N N 17.278 0.175 -6.281 -4.807 -2.864 1.099 H2 SYU 25 SYU H3 H3 H 0 1 N N N N N N 21.550 -7.528 -1.862 3.504 0.797 0.325 H3 SYU 26 SYU H4 H4 H 0 1 N N N N N N 21.764 -2.815 -3.096 -1.133 1.955 -0.710 H4 SYU 27 SYU H5 H5 H 0 1 N N N N N N 20.576 -2.899 -1.752 -1.135 1.832 1.065 H5 SYU 28 SYU H6 H6 H 0 1 N N N N N N 16.947 2.043 -4.851 -6.770 -1.818 1.970 H6 SYU 29 SYU H7 H7 H 0 1 N N N N N N 17.660 -2.744 -3.870 -2.540 -0.211 2.176 H7 SYU 30 SYU H9 H9 H 0 1 N N N N N N 19.160 -4.329 -4.771 -0.866 -1.394 -0.269 H9 SYU 31 SYU H10 H10 H 0 1 N N N N N N 18.901 -6.761 -5.129 1.201 -2.729 -0.348 H10 SYU 32 SYU H11 H11 H 0 1 N N N N N N 19.558 0.841 -4.705 -4.592 -1.200 -1.289 H11 SYU 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SYU C13 O01 SING N N 1 SYU C13 C02 SING N N 2 SYU C02 N01 SING N N 3 SYU C02 C03 DOUB N N 4 SYU F13 C12 SING N N 5 SYU N01 C05 SING N N 6 SYU C09 C08 DOUB Y N 7 SYU C09 C04 SING Y N 8 SYU F14 C12 SING N N 9 SYU C08 C07 SING Y N 10 SYU C03 N02 SING N N 11 SYU C05 S02 DOUB N N 12 SYU C05 N02 SING N N 13 SYU C12 C04 SING N N 14 SYU C12 F15 SING N N 15 SYU C04 C10 DOUB Y N 16 SYU N02 C01 SING N N 17 SYU C07 C01 SING N N 18 SYU C07 C06 DOUB Y N 19 SYU C10 C06 SING Y N 20 SYU C06 C11 SING N N 21 SYU F03 C11 SING N N 22 SYU C11 F02 SING N N 23 SYU C11 F01 SING N N 24 SYU C13 H1 SING N N 25 SYU C13 H2 SING N N 26 SYU C10 H3 SING N N 27 SYU C01 H4 SING N N 28 SYU C01 H5 SING N N 29 SYU O01 H6 SING N N 30 SYU C03 H7 SING N N 31 SYU C08 H9 SING N N 32 SYU C09 H10 SING N N 33 SYU N01 H11 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SYU InChI InChI 1.06 "InChI=1S/C13H10F6N2OS/c14-12(15,16)8-2-1-7(10(3-8)13(17,18)19)4-21-5-9(6-22)20-11(21)23/h1-3,5,22H,4,6H2,(H,20,23)" SYU InChIKey InChI 1.06 WXKONROFPLKHOA-UHFFFAOYSA-N SYU SMILES_CANONICAL CACTVS 3.385 "OCC1=CN(Cc2ccc(cc2C(F)(F)F)C(F)(F)F)C(=S)N1" SYU SMILES CACTVS 3.385 "OCC1=CN(Cc2ccc(cc2C(F)(F)F)C(F)(F)F)C(=S)N1" SYU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C(F)(F)F)C(F)(F)F)CN2C=C(NC2=S)CO" SYU SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C(F)(F)F)C(F)(F)F)CN2C=C(NC2=S)CO" # _pdbx_chem_comp_identifier.comp_id SYU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[[2,4-bis(trifluoromethyl)phenyl]methyl]-5-(hydroxymethyl)-1~{H}-imidazole-2-thione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SYU "Create component" 2022-12-20 PDBE SYU "Initial release" 2024-07-10 RCSB #