data_SYZ # _chem_comp.id SYZ _chem_comp.name "N-(2-(2,4-dioxothiazolidin-3-yl)ethyl)-3-methylbenzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H14 N2 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "~{N}-[2-[2,4-bis(oxidanylidene)-1,3-thiazolidin-3-yl]ethyl]-3-methyl-benzamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-08 _chem_comp.pdbx_modified_date 2020-12-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 278.327 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SYZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7B6N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SYZ N1 N1 N 0 1 N N N -36.885 1.973 0.797 2.999 0.251 -0.332 N1 SYZ 1 SYZ C4 C1 C 0 1 Y N N -38.690 9.216 1.256 -3.377 0.564 -1.237 C4 SYZ 2 SYZ C5 C2 C 0 1 Y N N -37.784 8.172 1.070 -3.157 -0.014 0.014 C5 SYZ 3 SYZ C6 C3 C 0 1 Y N N -36.525 8.429 0.515 -4.245 -0.399 0.799 C6 SYZ 4 SYZ C7 C4 C 0 1 N N N -38.203 6.807 1.492 -1.777 -0.219 0.505 C7 SYZ 5 SYZ C8 C5 C 0 1 N N N -37.786 4.337 1.265 0.638 -0.051 0.230 C8 SYZ 6 SYZ C10 C6 C 0 1 N N N -37.020 1.034 -0.272 3.585 1.204 0.374 C10 SYZ 7 SYZ O2 O1 O 0 1 N N N -36.897 2.066 3.117 3.176 -1.826 -1.243 O2 SYZ 8 SYZ C12 C7 C 0 1 N N N -36.966 1.431 2.107 3.627 -0.895 -0.605 C12 SYZ 9 SYZ S S1 S 0 1 N N N -37.173 -0.343 2.034 5.239 -0.813 0.129 S SYZ 10 SYZ C11 C8 C 0 1 N N N -37.122 -0.376 0.223 4.990 0.859 0.817 C11 SYZ 11 SYZ O1 O2 O 0 1 N N N -37.072 1.353 -1.438 3.046 2.256 0.641 O1 SYZ 12 SYZ C9 C9 C 0 1 N N N -36.709 3.439 0.560 1.632 0.454 -0.818 C9 SYZ 13 SYZ N N2 N 0 1 N N N -37.502 5.737 0.942 -0.729 0.153 -0.257 N SYZ 14 SYZ O O3 O 0 1 N N N -39.117 6.633 2.251 -1.589 -0.724 1.594 O SYZ 15 SYZ C3 C10 C 0 1 Y N N -38.309 10.501 0.886 -4.667 0.757 -1.687 C3 SYZ 16 SYZ C2 C11 C 0 1 Y N N -37.066 10.728 0.336 -5.741 0.373 -0.903 C2 SYZ 17 SYZ C1 C12 C 0 1 Y N N -36.186 9.708 0.146 -5.530 -0.205 0.336 C1 SYZ 18 SYZ C C13 C 0 1 N N N -34.869 9.966 -0.469 -6.705 -0.620 1.182 C SYZ 19 SYZ H1 H1 H 0 1 N N N -39.666 9.030 1.678 -2.540 0.864 -1.850 H1 SYZ 20 SYZ H2 H2 H 0 1 N N N -35.820 7.622 0.377 -4.081 -0.847 1.768 H2 SYZ 21 SYZ H3 H3 H 0 1 N N N -38.789 4.068 0.903 0.806 -1.113 0.408 H3 SYZ 22 SYZ H4 H4 H 0 1 N N N -37.738 4.190 2.354 0.778 0.501 1.159 H4 SYZ 23 SYZ H5 H5 H 0 1 N N N -38.040 -0.841 -0.166 5.710 1.561 0.395 H5 SYZ 24 SYZ H6 H6 H 0 1 N N N -35.717 3.732 0.933 1.464 1.516 -0.997 H6 SYZ 25 SYZ H7 H7 H 0 1 N N N -36.762 3.622 -0.523 1.491 -0.098 -1.748 H7 SYZ 26 SYZ H8 H8 H 0 1 N N N -36.767 5.935 0.293 -0.880 0.555 -1.126 H8 SYZ 27 SYZ H9 H9 H 0 1 N N N -38.991 11.326 1.030 -4.839 1.208 -2.653 H9 SYZ 28 SYZ H10 H10 H 0 1 N N N -36.786 11.731 0.051 -6.749 0.527 -1.260 H10 SYZ 29 SYZ H11 H11 H 0 1 N N N -34.136 10.199 0.317 -6.975 -1.650 0.949 H11 SYZ 30 SYZ H12 H12 H 0 1 N N N -34.542 9.074 -1.023 -6.439 -0.544 2.236 H12 SYZ 31 SYZ H13 H13 H 0 1 N N N -34.948 10.818 -1.160 -7.552 0.033 0.973 H13 SYZ 32 SYZ H14 H14 H 0 1 N N N -36.248 -0.952 -0.114 5.058 0.843 1.904 H14 SYZ 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SYZ O1 C10 DOUB N N 1 SYZ C C1 SING N N 2 SYZ C10 C11 SING N N 3 SYZ C10 N1 SING N N 4 SYZ C1 C2 DOUB Y N 5 SYZ C1 C6 SING Y N 6 SYZ C11 S SING N N 7 SYZ C2 C3 SING Y N 8 SYZ C6 C5 DOUB Y N 9 SYZ C9 N1 SING N N 10 SYZ C9 C8 SING N N 11 SYZ N1 C12 SING N N 12 SYZ C3 C4 DOUB Y N 13 SYZ N C8 SING N N 14 SYZ N C7 SING N N 15 SYZ C5 C4 SING Y N 16 SYZ C5 C7 SING N N 17 SYZ C7 O DOUB N N 18 SYZ S C12 SING N N 19 SYZ C12 O2 DOUB N N 20 SYZ C4 H1 SING N N 21 SYZ C6 H2 SING N N 22 SYZ C8 H3 SING N N 23 SYZ C8 H4 SING N N 24 SYZ C11 H5 SING N N 25 SYZ C9 H6 SING N N 26 SYZ C9 H7 SING N N 27 SYZ N H8 SING N N 28 SYZ C3 H9 SING N N 29 SYZ C2 H10 SING N N 30 SYZ C H11 SING N N 31 SYZ C H12 SING N N 32 SYZ C H13 SING N N 33 SYZ C11 H14 SING N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SYZ InChI InChI 1.03 "InChI=1S/C13H14N2O3S/c1-9-3-2-4-10(7-9)12(17)14-5-6-15-11(16)8-19-13(15)18/h2-4,7H,5-6,8H2,1H3,(H,14,17)" SYZ InChIKey InChI 1.03 LNKJOLQQLIVVPE-UHFFFAOYSA-N SYZ SMILES_CANONICAL CACTVS 3.385 "Cc1cccc(c1)C(=O)NCCN2C(=O)CSC2=O" SYZ SMILES CACTVS 3.385 "Cc1cccc(c1)C(=O)NCCN2C(=O)CSC2=O" SYZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cccc(c1)C(=O)NCCN2C(=O)CSC2=O" SYZ SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cccc(c1)C(=O)NCCN2C(=O)CSC2=O" # _pdbx_chem_comp_identifier.comp_id SYZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[2-[2,4-bis(oxidanylidene)-1,3-thiazolidin-3-yl]ethyl]-3-methyl-benzamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id SYZ _pdbx_chem_comp_synonyms.name "~{N}-[2-[2,4-bis(oxidanylidene)-1,3-thiazolidin-3-yl]ethyl]-3-methyl-benzamide" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SYZ "Create component" 2020-12-08 PDBE SYZ "Initial release" 2020-12-23 RCSB ##