data_T0T # _chem_comp.id T0T _chem_comp.name "(1R)-1-{4-[(E)-2-(2-aminophenyl)ethenyl]phenyl}-1,4-anhydro-2-deoxy-5-O-phosphonato-D-erythro-pentitol" _chem_comp.type "DNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C19 H22 N O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-06-24 _chem_comp.pdbx_modified_date 2014-11-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 391.355 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T0T _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4UQG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T0T P P P 0 1 N N N -27.511 -22.535 12.067 -5.270 2.276 -0.221 P T0T 1 T0T C1 C1 C 0 1 Y N N -29.444 -18.307 14.742 -0.181 -1.940 -0.349 C1 T0T 2 T0T C2 C2 C 0 1 Y N N -28.242 -19.002 14.937 0.733 -2.846 -0.858 C2 T0T 3 T0T C3 C3 C 0 1 Y N N -27.639 -19.030 16.209 2.076 -2.535 -0.882 C3 T0T 4 T0T C4 C4 C 0 1 Y N N -28.214 -18.357 17.292 2.514 -1.302 -0.391 C4 T0T 5 T0T C5 C5 C 0 1 Y N N -29.394 -17.655 17.083 1.585 -0.392 0.121 C5 T0T 6 T0T C6 C6 C 0 1 Y N N -30.005 -17.618 15.822 0.244 -0.717 0.139 C6 T0T 7 T0T C7 C7 C 0 1 N N N -27.645 -18.348 18.677 3.948 -0.963 -0.413 C7 T0T 8 T0T C8 C8 C 0 1 N N N -26.528 -18.981 19.035 4.365 0.224 0.059 C8 T0T 9 T0T C9 C9 C 0 1 Y N N -25.948 -18.974 20.420 5.797 0.562 0.037 C9 T0T 10 T0T "C1'" "C1'" C 0 1 N N R -30.148 -18.249 13.425 -1.648 -2.285 -0.331 "C1'" T0T 11 T0T C10 C10 C 0 1 Y N N -24.781 -19.746 20.516 6.726 -0.346 -0.474 C10 T0T 12 T0T C11 C11 C 0 1 Y N N -24.096 -19.835 21.734 8.067 -0.022 -0.492 C11 T0T 13 T0T C12 C12 C 0 1 Y N N -24.577 -19.196 22.876 8.498 1.200 -0.004 C12 T0T 14 T0T C13 C13 C 0 1 Y N N -25.756 -18.443 22.812 7.590 2.109 0.505 C13 T0T 15 T0T C14 C14 C 0 1 Y N N -26.476 -18.349 21.595 6.237 1.804 0.525 C14 T0T 16 T0T N15 N15 N 0 1 N N N -27.608 -17.501 21.604 5.319 2.721 1.033 N15 T0T 17 T0T "C2'" "C2'" C 0 1 N N N -29.347 -17.662 12.305 -2.079 -2.764 1.079 "C2'" T0T 18 T0T "C3'" "C3'" C 0 1 N N S -29.828 -18.452 11.078 -3.595 -2.450 1.078 "C3'" T0T 19 T0T "O3'" "O3'" O 0 1 N N N -30.997 -17.966 10.496 -4.349 -3.621 0.760 "O3'" T0T 20 T0T "C4'" "C4'" C 0 1 N N R -30.010 -19.815 11.634 -3.760 -1.386 -0.025 "C4'" T0T 21 T0T "O4'" "O4'" O 0 1 N N N -30.459 -19.610 13.002 -2.451 -1.104 -0.546 "O4'" T0T 22 T0T "C5'" "C5'" C 0 1 N N N -28.660 -20.435 11.629 -4.370 -0.113 0.567 "C5'" T0T 23 T0T "O5'" "O5'" O 0 1 N N N -28.714 -21.774 11.402 -4.627 0.823 -0.481 "O5'" T0T 24 T0T OP1 OP1 O 0 1 N N N -27.595 -24.002 11.659 -5.537 3.005 -1.631 OP1 T0T 25 T0T OP2 OP2 O 0 1 N N N -26.256 -21.760 11.864 -6.549 2.126 0.508 OP2 T0T 26 T0T OP3 OP3 O 0 1 N N N -27.909 -22.396 13.607 -4.253 3.163 0.658 OP3 T0T 27 T0T H2 H2 H 0 1 N N N -27.777 -19.517 14.109 0.393 -3.798 -1.237 H2 T0T 28 T0T H3 H3 H 0 1 N N N -26.720 -19.579 16.350 2.789 -3.243 -1.280 H3 T0T 29 T0T H5 H5 H 0 1 N N N -29.850 -17.127 17.908 1.916 0.563 0.502 H5 T0T 30 T0T H6 H6 H 0 1 N N N -30.915 -17.054 15.683 -0.475 -0.015 0.535 H6 T0T 31 T0T H7 H7 H 0 1 N N N -28.175 -17.792 19.436 4.663 -1.668 -0.810 H7 T0T 32 T0T H8 H8 H 0 1 N N N -26.002 -19.539 18.274 3.649 0.929 0.456 H8 T0T 33 T0T "H1'" "H1'" H 0 1 N N N -31.080 -17.676 13.540 -1.872 -3.045 -1.080 "H1'" T0T 34 T0T H10 H10 H 0 1 N N N -24.410 -20.273 19.649 6.396 -1.301 -0.855 H10 T0T 35 T0T H11 H11 H 0 1 N N N -23.182 -20.407 21.790 8.785 -0.726 -0.887 H11 T0T 36 T0T H12 H12 H 0 1 N N N -24.041 -19.282 23.809 9.549 1.444 -0.022 H12 T0T 37 T0T H13 H13 H 0 1 N N N -26.118 -17.933 23.692 7.934 3.060 0.884 H13 T0T 38 T0T HN15 HN15 H 0 0 N N N -27.783 -17.187 22.537 4.374 2.504 1.050 HN15 T0T 39 T0T HN1A HN1A H 0 0 N N N -27.438 -16.712 21.014 5.626 3.578 1.369 HN1A T0T 40 T0T "H2'" "H2'" H 0 1 N N N -29.557 -16.588 12.190 -1.904 -3.833 1.197 "H2'" T0T 41 T0T "H2'A" "H2'A" H 0 0 N N N -28.270 -17.809 12.471 -1.565 -2.198 1.856 "H2'A" T0T 42 T0T "H3'" "H3'" H 0 1 N N N -29.014 -18.472 10.339 -3.902 -2.050 2.045 "H3'" T0T 43 T0T "HO3'" "HO3'" H 0 0 N N N -31.227 -18.505 9.748 -4.236 -4.345 1.391 "HO3'" T0T 44 T0T "H4'" "H4'" H 0 1 N N N -30.729 -20.402 11.045 -4.400 -1.771 -0.819 "H4'" T0T 45 T0T "H5'" "H5'" H 0 1 N N N -28.057 -19.965 10.838 -5.305 -0.359 1.072 "H5'" T0T 46 T0T "H5'A" "H5'A" H 0 0 N N N -28.185 -20.260 12.606 -3.674 0.324 1.283 "H5'A" T0T 47 T0T H21 H21 H 0 1 N N N -26.764 -24.277 11.290 -5.925 3.888 -1.550 H21 T0T 48 T0T H23 H23 H 0 1 N N N -27.267 -21.856 14.053 -3.392 3.303 0.241 H23 T0T 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T0T P "O5'" SING N N 1 T0T P OP1 SING N N 2 T0T P OP2 DOUB N N 3 T0T P OP3 SING N N 4 T0T C1 C2 DOUB Y N 5 T0T C1 C6 SING Y N 6 T0T C1 "C1'" SING N N 7 T0T C2 C3 SING Y N 8 T0T C3 C4 DOUB Y N 9 T0T C4 C5 SING Y N 10 T0T C4 C7 SING N N 11 T0T C5 C6 DOUB Y N 12 T0T C7 C8 DOUB N E 13 T0T C8 C9 SING N N 14 T0T C9 C10 DOUB Y N 15 T0T C9 C14 SING Y N 16 T0T "C1'" "C2'" SING N N 17 T0T "C1'" "O4'" SING N N 18 T0T C10 C11 SING Y N 19 T0T C11 C12 DOUB Y N 20 T0T C12 C13 SING Y N 21 T0T C13 C14 DOUB Y N 22 T0T C14 N15 SING N N 23 T0T "C2'" "C3'" SING N N 24 T0T "C3'" "O3'" SING N N 25 T0T "C3'" "C4'" SING N N 26 T0T "C4'" "O4'" SING N N 27 T0T "C4'" "C5'" SING N N 28 T0T "C5'" "O5'" SING N N 29 T0T C2 H2 SING N N 30 T0T C3 H3 SING N N 31 T0T C5 H5 SING N N 32 T0T C6 H6 SING N N 33 T0T C7 H7 SING N N 34 T0T C8 H8 SING N N 35 T0T "C1'" "H1'" SING N N 36 T0T C10 H10 SING N N 37 T0T C11 H11 SING N N 38 T0T C12 H12 SING N N 39 T0T C13 H13 SING N N 40 T0T N15 HN15 SING N N 41 T0T N15 HN1A SING N N 42 T0T "C2'" "H2'" SING N N 43 T0T "C2'" "H2'A" SING N N 44 T0T "C3'" "H3'" SING N N 45 T0T "O3'" "HO3'" SING N N 46 T0T "C4'" "H4'" SING N N 47 T0T "C5'" "H5'" SING N N 48 T0T "C5'" "H5'A" SING N N 49 T0T OP1 H21 SING N N 50 T0T OP3 H23 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T0T SMILES ACDLabs 12.01 "O=P(O)(OCC3OC(c2ccc(\C=C\c1ccccc1N)cc2)CC3O)O" T0T InChI InChI 1.03 "InChI=1S/C19H22NO6P/c20-16-4-2-1-3-14(16)8-5-13-6-9-15(10-7-13)18-11-17(21)19(26-18)12-25-27(22,23)24/h1-10,17-19,21H,11-12,20H2,(H2,22,23,24)/b8-5+/t17-,18+,19+/m0/s1" T0T InChIKey InChI 1.03 NAVOUHWZGHPJBG-YOKLGZCWSA-N T0T SMILES_CANONICAL CACTVS 3.385 "Nc1ccccc1/C=C/c2ccc(cc2)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3" T0T SMILES CACTVS 3.385 "Nc1ccccc1C=Cc2ccc(cc2)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3" T0T SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)/C=C/c2ccc(cc2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)N" T0T SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)C=Cc2ccc(cc2)C3CC(C(O3)COP(=O)(O)O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier T0T "SYSTEMATIC NAME" ACDLabs 12.01 "(1R)-1-{4-[(E)-2-(2-aminophenyl)ethenyl]phenyl}-1,4-anhydro-2-deoxy-5-O-phosphono-D-erythro-pentitol" T0T "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,5R)-5-[4-[(E)-2-(2-aminophenyl)ethenyl]phenyl]-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T0T "Create component" 2014-06-24 EBI T0T "Initial release" 2014-12-03 RCSB #