data_T1C # _chem_comp.id T1C _chem_comp.name TIGECYCLINE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type ? _chem_comp.formula "C29 H41 N5 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2011-11-07 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 587.665 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T1C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4A6N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T1C C94 C94 C 0 1 N N N 8.656 -35.734 22.660 -9.738 1.576 -1.004 C94 T1C 1 T1C C93 C93 C 0 1 N N N 7.652 -36.804 22.199 -9.577 0.253 -0.252 C93 T1C 2 T1C C95 C95 C 0 1 N N N 6.234 -36.215 22.067 -9.859 0.474 1.235 C95 T1C 3 T1C C96 C96 C 0 1 N N N 7.631 -37.973 23.204 -10.563 -0.774 -0.811 C96 T1C 4 T1C N92 N92 N 0 1 N N N 8.098 -37.352 20.883 -8.205 -0.243 -0.422 N92 T1C 5 T1C C92 C92 C 0 1 N N N 8.107 -36.444 19.702 -7.228 0.720 0.104 C92 T1C 6 T1C C91 C91 C 0 1 N N N 6.942 -36.782 18.742 -5.835 0.178 -0.087 C91 T1C 7 T1C O91 O91 O 0 1 N N N 6.871 -37.876 18.168 -5.672 -0.904 -0.610 O91 T1C 8 T1C N9 N9 N 0 1 N N N 6.064 -35.781 18.613 -4.770 0.896 0.323 N9 T1C 9 T1C C9 C9 C 0 1 Y N N 4.936 -35.717 17.873 -3.486 0.339 0.265 C9 T1C 10 T1C C8 C8 C 0 1 Y N N 3.981 -36.734 17.769 -3.324 -1.037 0.289 C8 T1C 11 T1C C7 C7 C 0 1 Y N N 2.789 -36.614 17.013 -2.058 -1.595 0.226 C7 T1C 12 T1C N7 N7 N 1 1 N N N 1.999 -37.736 17.018 -1.908 -2.985 0.252 N7 T1C 13 T1C C71 C71 C 0 1 N N N 2.818 -38.858 16.485 -2.571 -3.527 1.446 C71 T1C 14 T1C C72 C72 C 0 1 N N N 0.517 -37.758 16.668 -2.518 -3.566 -0.952 C72 T1C 15 T1C C61 C61 C 0 1 Y N N 2.525 -35.409 16.298 -0.945 -0.787 0.138 C61 T1C 16 T1C C6 C6 C 0 1 N N N 1.207 -35.172 15.433 0.427 -1.402 0.037 C6 T1C 17 T1C C51 C51 C 0 1 N N R 1.269 -33.999 14.415 1.447 -0.538 0.775 C51 T1C 18 T1C C5 C5 C 0 1 N N N -0.073 -33.337 13.915 2.851 -1.113 0.570 C5 T1C 19 T1C C41 C41 C 0 1 N N S 0.239 -32.314 12.770 3.859 -0.115 1.133 C41 T1C 20 T1C C4 C4 C 0 1 N N S -0.959 -31.617 11.994 5.239 -0.726 1.282 C4 T1C 21 T1C N4 N4 N 1 1 N N N -0.903 -31.503 10.532 6.063 0.157 2.119 N4 T1C 22 T1C C43 C43 C 0 1 N N N 0.122 -30.506 10.196 5.393 0.373 3.409 C43 T1C 23 T1C C42 C42 C 0 1 N N N -0.713 -32.865 9.973 7.373 -0.466 2.346 C42 T1C 24 T1C C3 C3 C 0 1 N N N -1.409 -30.265 12.546 5.920 -0.917 -0.040 C3 T1C 25 T1C O3 O3 O 0 1 N N N -2.612 -29.830 12.085 6.926 -1.800 -0.128 O3 T1C 26 T1C C2 C2 C 0 1 N N N -0.737 -29.589 13.551 5.550 -0.220 -1.163 C2 T1C 27 T1C C21 C21 C 0 1 N N N -1.335 -28.269 14.171 6.275 -0.428 -2.426 C21 T1C 28 T1C O21 O21 O 0 1 N N N -2.441 -27.870 13.800 7.180 0.323 -2.739 O21 T1C 29 T1C N21 N21 N 0 1 N N N -0.612 -27.611 15.116 5.937 -1.449 -3.237 N21 T1C 30 T1C C1 C1 C 0 1 N N N 0.480 -30.094 13.977 4.438 0.728 -1.109 C1 T1C 31 T1C O1 O1 O 0 1 N N N 1.105 -29.463 14.827 3.966 1.186 -2.130 O1 T1C 32 T1C C1C C1C C 0 1 N N S 1.178 -31.275 13.314 3.885 1.129 0.245 C1C T1C 33 T1C O1C O1C O 0 1 N N N 1.915 -30.763 12.209 4.695 2.148 0.835 O1C T1C 34 T1C C12 C12 C 0 1 N N N 2.248 -31.726 14.250 2.476 1.616 0.037 C12 T1C 35 T1C O12 O12 O 0 1 N N N 3.188 -30.808 14.512 2.303 2.872 -0.421 O12 T1C 36 T1C C1B C1B C 0 1 N N N 2.283 -32.959 14.863 1.387 0.881 0.278 C1B T1C 37 T1C C11 C11 C 0 1 N N N 3.322 -33.206 15.761 0.105 1.464 0.053 C11 T1C 38 T1C O11 O11 O 0 1 N N N 4.148 -32.325 15.969 -0.001 2.652 -0.193 O11 T1C 39 T1C C1A C1A C 0 1 Y N N 3.516 -34.403 16.424 -1.092 0.602 0.123 C1A T1C 40 T1C C10 C10 C 0 1 Y N N 4.704 -34.529 17.201 -2.369 1.168 0.177 C10 T1C 41 T1C O10 O10 O 0 1 N N N 5.688 -33.548 17.329 -2.520 2.517 0.148 O10 T1C 42 T1C H941 H941 H 0 0 N N N 9.657 -36.182 22.745 -9.035 2.308 -0.606 H941 T1C 43 T1C H942 H942 H 0 0 N N N 8.682 -34.915 21.926 -9.537 1.418 -2.064 H942 T1C 44 T1C H943 H943 H 0 0 N N N 8.347 -35.339 23.639 -10.756 1.944 -0.878 H943 T1C 45 T1C H951 H951 H 0 0 N N N 5.539 -37.001 21.737 -10.877 0.842 1.361 H951 T1C 46 T1C H952 H952 H 0 0 N N N 5.908 -35.823 23.042 -9.744 -0.468 1.771 H952 T1C 47 T1C H953 H953 H 0 0 N N N 6.243 -35.400 21.329 -9.156 1.206 1.633 H953 T1C 48 T1C H961 H961 H 0 0 N N N 6.911 -38.734 22.868 -10.363 -0.932 -1.870 H961 T1C 49 T1C H962 H962 H 0 0 N N N 8.634 -38.420 23.267 -10.449 -1.717 -0.275 H962 T1C 50 T1C H963 H963 H 0 0 N N N 7.333 -37.599 24.195 -11.582 -0.406 -0.685 H963 T1C 51 T1C H92 H92 H 0 1 N N N 9.032 -37.688 21.004 -8.091 -1.147 0.011 H92 T1C 52 T1C H921 H921 H 0 0 N N N 8.002 -35.404 20.045 -7.326 1.666 -0.429 H921 T1C 53 T1C H922 H922 H 0 0 N N N 9.061 -36.558 19.166 -7.412 0.881 1.167 H922 T1C 54 T1C H9 H9 H 0 1 N N N 6.274 -34.959 19.142 -4.894 1.797 0.659 H9 T1C 55 T1C H8 H8 H 0 1 N N N 4.162 -37.661 18.293 -4.190 -1.679 0.356 H8 T1C 56 T1C H711 H711 H 0 0 N N N 2.216 -39.779 16.474 -3.631 -3.276 1.418 H711 T1C 57 T1C H712 H712 H 0 0 N N N 3.144 -38.620 15.462 -2.454 -4.610 1.466 H712 T1C 58 T1C H713 H713 H 0 0 N N N 3.700 -39.005 17.126 -2.118 -3.096 2.339 H713 T1C 59 T1C H721 H721 H 0 0 N N N 0.135 -38.786 16.754 -3.578 -3.315 -0.979 H721 T1C 60 T1C H722 H722 H 0 0 N N N -0.033 -37.103 17.360 -2.026 -3.164 -1.838 H722 T1C 61 T1C H723 H723 H 0 0 N N N 0.379 -37.401 15.637 -2.401 -4.649 -0.932 H723 T1C 62 T1C H61C H61C H 0 0 N N N 1.001 -36.095 14.872 0.410 -2.398 0.479 H61C T1C 63 T1C H62C H62C H 0 0 N N N 0.378 -34.972 16.128 0.711 -1.480 -1.012 H62C T1C 64 T1C H51 H51 H 0 1 N N N 1.705 -34.444 13.509 1.213 -0.544 1.840 H51 T1C 65 T1C H51C H51C H 0 0 N N N -0.747 -34.119 13.534 2.940 -2.064 1.097 H51C T1C 66 T1C H52C H52C H 0 0 N N N -0.556 -32.813 14.752 3.036 -1.263 -0.494 H52C T1C 67 T1C H41 H41 H 0 1 N N N 0.799 -32.876 12.008 3.516 0.192 2.121 H41 T1C 68 T1C H4 H4 H 0 1 N N N -1.813 -32.283 12.189 5.147 -1.694 1.774 H4 T1C 69 T1C H431 H431 H 0 0 N N N 0.186 -30.399 9.103 5.313 -0.575 3.940 H431 T1C 70 T1C H432 H432 H 0 0 N N N -0.148 -29.538 10.644 5.974 1.076 4.006 H432 T1C 71 T1C H433 H433 H 0 0 N N N 1.095 -30.834 10.590 4.397 0.780 3.237 H433 T1C 72 T1C H421 H421 H 0 0 N N N -0.667 -32.808 8.875 7.238 -1.423 2.851 H421 T1C 73 T1C H422 H422 H 0 0 N N N 0.225 -33.291 10.357 7.870 -0.627 1.390 H422 T1C 74 T1C H423 H423 H 0 0 N N N -1.556 -33.505 10.272 7.984 0.189 2.968 H423 T1C 75 T1C H3 H3 H 0 1 N N N -2.866 -29.044 12.554 7.395 -1.848 -0.973 H3 T1C 76 T1C H211 H211 H 0 0 N N N -0.974 -26.777 15.532 5.169 -2.004 -3.024 H211 T1C 77 T1C H212 H212 H 0 0 N N N 0.282 -27.961 15.395 6.460 -1.631 -4.033 H212 T1C 78 T1C H1C H1C H 0 1 N N N 2.523 -30.100 12.513 4.747 2.961 0.314 H1C T1C 79 T1C H12 H12 H 0 1 N N N 3.805 -31.157 15.145 2.721 3.585 0.082 H12 T1C 80 T1C H10 H10 H 0 1 N N N 5.422 -32.769 16.855 -2.513 2.933 1.021 H10 T1C 81 T1C H42 H42 H 0 1 N N N -1.786 -31.160 10.213 6.188 1.043 1.653 H42 T1C 82 T1C H7 H7 H 0 1 N N N 1.967 -37.965 17.991 -0.927 -3.217 0.278 H7 T1C 83 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T1C C94 C93 SING N N 1 T1C C93 C95 SING N N 2 T1C C93 C96 SING N N 3 T1C C93 N92 SING N N 4 T1C N92 C92 SING N N 5 T1C C92 C91 SING N N 6 T1C C91 O91 DOUB N N 7 T1C C91 N9 SING N N 8 T1C N9 C9 SING N N 9 T1C C9 C8 DOUB Y N 10 T1C C9 C10 SING Y N 11 T1C C8 C7 SING Y N 12 T1C C7 N7 SING N N 13 T1C C7 C61 DOUB Y N 14 T1C C6 C61 SING N N 15 T1C N7 C71 SING N N 16 T1C N7 C72 SING N N 17 T1C C61 C1A SING Y N 18 T1C C6 C51 SING N N 19 T1C C51 C5 SING N N 20 T1C C51 C1B SING N N 21 T1C C5 C41 SING N N 22 T1C C41 C4 SING N N 23 T1C C41 C1C SING N N 24 T1C C4 N4 SING N N 25 T1C C4 C3 SING N N 26 T1C N4 C43 SING N N 27 T1C N4 C42 SING N N 28 T1C C3 O3 SING N N 29 T1C C3 C2 DOUB N N 30 T1C C2 C21 SING N N 31 T1C C2 C1 SING N N 32 T1C C21 O21 DOUB N N 33 T1C C21 N21 SING N N 34 T1C C1 O1 DOUB N N 35 T1C C1 C1C SING N N 36 T1C C1C O1C SING N N 37 T1C C1C C12 SING N N 38 T1C C12 O12 SING N N 39 T1C C12 C1B DOUB N N 40 T1C C1B C11 SING N N 41 T1C C11 O11 DOUB N N 42 T1C C11 C1A SING N N 43 T1C C1A C10 DOUB Y N 44 T1C C10 O10 SING N N 45 T1C C94 H941 SING N N 46 T1C C94 H942 SING N N 47 T1C C94 H943 SING N N 48 T1C C95 H951 SING N N 49 T1C C95 H952 SING N N 50 T1C C95 H953 SING N N 51 T1C C96 H961 SING N N 52 T1C C96 H962 SING N N 53 T1C C96 H963 SING N N 54 T1C N92 H92 SING N N 55 T1C C92 H921 SING N N 56 T1C C92 H922 SING N N 57 T1C N9 H9 SING N N 58 T1C C8 H8 SING N N 59 T1C C71 H711 SING N N 60 T1C C71 H712 SING N N 61 T1C C71 H713 SING N N 62 T1C C72 H721 SING N N 63 T1C C72 H722 SING N N 64 T1C C72 H723 SING N N 65 T1C C6 H61C SING N N 66 T1C C6 H62C SING N N 67 T1C C51 H51 SING N N 68 T1C C5 H51C SING N N 69 T1C C5 H52C SING N N 70 T1C C41 H41 SING N N 71 T1C C4 H4 SING N N 72 T1C C43 H431 SING N N 73 T1C C43 H432 SING N N 74 T1C C43 H433 SING N N 75 T1C C42 H421 SING N N 76 T1C C42 H422 SING N N 77 T1C C42 H423 SING N N 78 T1C O3 H3 SING N N 79 T1C N21 H211 SING N N 80 T1C N21 H212 SING N N 81 T1C O1C H1C SING N N 82 T1C O12 H12 SING N N 83 T1C O10 H10 SING N N 84 T1C N4 H42 SING N N 85 T1C N7 H7 SING N N 86 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T1C SMILES ACDLabs 12.01 "O=C2C1=C(O)C4(O)C(=O)C(=C(O)C(C4CC1Cc3c2c(O)c(NC(=O)CNC(C)(C)C)cc3[NH+](C)C)[NH+](C)C)C(=O)N" T1C InChI InChI 1.03 "InChI=1S/C29H39N5O8/c1-28(2,3)31-11-17(35)32-15-10-16(33(4)5)13-8-12-9-14-21(34(6)7)24(38)20(27(30)41)26(40)29(14,42)25(39)18(12)23(37)19(13)22(15)36/h10,12,14,21,31,36,38-39,42H,8-9,11H2,1-7H3,(H2,30,41)(H,32,35)/p+2/t12-,14-,21-,29-/m0/s1" T1C InChIKey InChI 1.03 FPZLLRFZJZRHSY-HJYUBDRYSA-P T1C SMILES_CANONICAL CACTVS 3.385 "C[NH+](C)[C@H]1[C@@H]2C[C@@H]3Cc4c(cc(NC(=O)CNC(C)(C)C)c(O)c4C(=O)C3=C(O)[C@]2(O)C(=O)C(=C1O)C(N)=O)[NH+](C)C" T1C SMILES CACTVS 3.385 "C[NH+](C)[CH]1[CH]2C[CH]3Cc4c(cc(NC(=O)CNC(C)(C)C)c(O)c4C(=O)C3=C(O)[C]2(O)C(=O)C(=C1O)C(N)=O)[NH+](C)C" T1C SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC(C)(C)NCC(=O)Nc1cc(c2c(c1O)C(=O)C3=C([C@]4([C@@H](C[C@@H]3C2)[C@@H](C(=C(C4=O)C(=O)N)O)[NH+](C)C)O)O)[NH+](C)C" T1C SMILES "OpenEye OEToolkits" 1.9.2 "CC(C)(C)NCC(=O)Nc1cc(c2c(c1O)C(=O)C3=C(C4(C(CC3C2)C(C(=C(C4=O)C(=O)N)O)[NH+](C)C)O)O)[NH+](C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier T1C "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,4aS,11aR,12aS)-8-[(N-tert-butylglycyl)amino]-3-carbamoyl-2,4a,5,7-tetrahydroxy-N,N,N',N'-tetramethyl-4,6-dioxo-1,4,4a,6,11,11a,12,12a-octahydrotetracene-1,10-diaminium" T1C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "[(1S,4aS,11aR,12aS)-3-aminocarbonyl-8-[2-(tert-butylamino)ethanoylamino]-10-(dimethylazaniumyl)-2,4a,5,7-tetrakis(oxidanyl)-4,6-bis(oxidanylidene)-11,11a,12,12a-tetrahydro-1H-tetracen-1-yl]-dimethyl-azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T1C "Create component" 2011-11-07 EBI T1C "Initial release" 2012-11-16 RCSB T1C "Modify descriptor" 2014-09-05 RCSB #