data_T2J # _chem_comp.id T2J _chem_comp.name "1 1-(4-(2-nitrophenyl)piperazin-1-yl)ethan-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H15 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-03-16 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 249.266 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T2J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5REM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T2J N1 N1 N 0 1 N N N N N N 7.315 -4.338 23.770 -0.064 -0.009 -0.007 N1 T2J 1 T2J C4 C1 C 0 1 Y N N N N N 9.228 -4.906 25.154 -1.437 1.974 0.060 C4 T2J 2 T2J C5 C2 C 0 1 Y N N N N N 7.854 -4.751 24.987 -1.325 0.591 0.011 C5 T2J 3 T2J C6 C3 C 0 1 N N N N N N 7.740 -3.124 23.062 0.663 0.255 1.242 C6 T2J 4 T2J C7 C4 C 0 1 N N N N N N 8.176 -3.444 21.648 1.958 -0.563 1.259 C7 T2J 5 T2J C8 C5 C 0 1 N N N N N N 6.766 -5.437 21.662 2.008 -0.384 -1.259 C8 T2J 6 T2J C10 C6 C 0 1 N N N N N N 6.597 -3.933 19.748 4.009 0.083 0.080 C10 T2J 7 T2J N N2 N 1 1 N N N N N N 5.554 -4.885 26.030 -2.355 -1.670 -0.073 N T2J 8 T2J C C7 C 0 1 Y N N N N N 7.011 -5.018 26.091 -2.470 -0.195 -0.021 C T2J 9 T2J O O1 O -1 1 N N N N N N 4.912 -5.758 25.467 -3.356 -2.361 -0.004 O T2J 10 T2J C1 C8 C 0 1 Y N N N N N 7.545 -5.425 27.308 -3.715 0.401 -0.004 C1 T2J 11 T2J C11 C9 C 0 1 N N N N N N 7.209 -2.829 18.940 4.728 0.491 -1.180 C11 T2J 12 T2J C2 C10 C 0 1 Y N N N N N 8.911 -5.571 27.440 -3.823 1.779 0.045 C2 T2J 13 T2J C3 C11 C 0 1 Y N N N N N 9.749 -5.315 26.371 -2.686 2.564 0.077 C3 T2J 14 T2J C9 C12 C 0 1 N N N N N N 6.279 -5.082 23.046 0.711 0.428 -1.177 C9 T2J 15 T2J N2 N3 N 0 1 N N N N N N 7.152 -4.224 20.944 2.710 -0.274 0.029 N2 T2J 16 T2J O1 O2 O 0 1 N N N N N N 5.037 -3.928 26.583 -1.261 -2.192 -0.184 O1 T2J 17 T2J O2 O3 O 0 1 N N N N N N 5.666 -4.572 19.283 4.598 0.076 1.139 O2 T2J 18 T2J H3 H1 H 0 1 N N N N N N 9.893 -4.706 24.327 -0.549 2.588 0.089 H3 T2J 19 T2J H5 H2 H 0 1 N N N N N N 6.900 -2.415 23.027 0.903 1.317 1.305 H5 T2J 20 T2J H4 H3 H 0 1 N N N N N N 8.582 -2.668 23.603 0.042 -0.028 2.091 H4 T2J 21 T2J H7 H4 H 0 1 N N N N N N 8.349 -2.504 21.104 2.556 -0.286 2.127 H7 T2J 22 T2J H6 H5 H 0 1 N N N N N N 9.110 -4.025 21.683 1.719 -1.626 1.304 H6 T2J 23 T2J H9 H6 H 0 1 N N N N N N 5.961 -5.946 21.112 1.773 -1.430 -1.459 H9 T2J 24 T2J H8 H7 H 0 1 N N N N N N 7.636 -6.106 21.742 2.636 0.010 -2.057 H8 T2J 25 T2J H H9 H 0 1 N N N N N N 6.894 -5.626 28.146 -4.606 -0.209 -0.029 H T2J 26 T2J H15 H10 H 0 1 N N N N N N 6.690 -2.750 17.973 4.019 0.530 -2.007 H15 T2J 27 T2J H13 H11 H 0 1 N N N N N N 7.113 -1.879 19.486 5.177 1.474 -1.040 H13 T2J 28 T2J H12 H12 H 0 1 N N N N N N 8.273 -3.047 18.768 5.508 -0.236 -1.405 H12 T2J 29 T2J H1 H13 H 0 1 N N N N N N 9.328 -5.887 28.385 -4.799 2.243 0.058 H1 T2J 30 T2J H2 H14 H 0 1 N N N N N N 10.816 -5.434 26.485 -2.774 3.640 0.120 H2 T2J 31 T2J H11 H15 H 0 1 N N N N N N 5.375 -4.461 22.965 0.124 0.268 -2.081 H11 T2J 32 T2J H10 H16 H 0 1 N N N N N N 6.042 -6.005 23.596 0.950 1.487 -1.080 H10 T2J 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T2J N O SING N N 1 T2J N O1 DOUB N N 2 T2J C N SING N N 3 T2J C C1 DOUB Y N 4 T2J C2 C1 SING Y N 5 T2J C3 C2 DOUB Y N 6 T2J C4 C3 SING Y N 7 T2J C5 C4 DOUB Y N 8 T2J C5 C SING Y N 9 T2J N1 C5 SING N N 10 T2J C6 N1 SING N N 11 T2J C7 C6 SING N N 12 T2J N2 C7 SING N N 13 T2J N2 C8 SING N N 14 T2J C8 C9 SING N N 15 T2J C9 N1 SING N N 16 T2J C10 N2 SING N N 17 T2J C10 O2 DOUB N N 18 T2J C11 C10 SING N N 19 T2J C4 H3 SING N N 20 T2J C6 H5 SING N N 21 T2J C6 H4 SING N N 22 T2J C7 H7 SING N N 23 T2J C7 H6 SING N N 24 T2J C8 H9 SING N N 25 T2J C8 H8 SING N N 26 T2J C1 H SING N N 27 T2J C11 H15 SING N N 28 T2J C11 H13 SING N N 29 T2J C11 H12 SING N N 30 T2J C2 H1 SING N N 31 T2J C3 H2 SING N N 32 T2J C9 H11 SING N N 33 T2J C9 H10 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T2J SMILES ACDLabs 12.01 "N2(c1ccccc1[N+]([O-])=O)CCN(CC2)C(=O)C" T2J InChI InChI 1.03 "InChI=1S/C12H15N3O3/c1-10(16)13-6-8-14(9-7-13)11-4-2-3-5-12(11)15(17)18/h2-5H,6-9H2,1H3" T2J InChIKey InChI 1.03 LEDSXFUCNNKEDB-UHFFFAOYSA-N T2J SMILES_CANONICAL CACTVS 3.385 "CC(=O)N1CCN(CC1)c2ccccc2[N+]([O-])=O" T2J SMILES CACTVS 3.385 "CC(=O)N1CCN(CC1)c2ccccc2[N+]([O-])=O" T2J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)c2ccccc2[N+](=O)[O-]" T2J SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)c2ccccc2[N+](=O)[O-]" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier T2J "SYSTEMATIC NAME" ACDLabs 12.01 "1-[4-(2-nitrophenyl)piperazin-1-yl]ethan-1-one" T2J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[4-(2-nitrophenyl)piperazin-1-yl]ethanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T2J "Create component" 2020-03-16 RCSB T2J "Initial release" 2020-03-25 RCSB T2J "Modify formula" 2020-03-26 RCSB T2J "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id T2J _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C11 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #