data_T3H # _chem_comp.id T3H _chem_comp.name "(2~{S})-1-[4-[[(~{E})-~{N},~{N}'-dimethylcarbamimidoyl]amino]phenyl]-~{N}-[[2-(3-methyl-1,2,3-triazol-4-yl)-1~{H}-benzimidazol-5-yl]methyl]pyrrolidine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H30 N10 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-14 _chem_comp.pdbx_modified_date 2021-10-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 486.572 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T3H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7B82 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T3H C12 C1 C 0 1 N N N 15.994 -1.557 -6.338 -3.807 3.256 -0.757 C12 T3H 1 T3H C13 C2 C 0 1 N N N 16.997 -0.723 -5.972 -2.582 3.889 -1.462 C13 T3H 2 T3H C14 C3 C 0 1 N N N 16.356 0.282 -4.980 -1.647 2.662 -1.627 C14 T3H 3 T3H C15 C4 C 0 1 N N S 14.828 0.303 -5.367 -1.912 1.848 -0.343 C15 T3H 4 T3H O17 O1 O 0 1 N N N 15.294 1.957 -7.005 -1.160 2.644 1.748 O17 T3H 5 T3H C19 C5 C 0 1 N N N 13.032 3.322 -7.082 1.472 2.168 1.418 C19 T3H 6 T3H C23 C6 C 0 1 Y N N 9.048 4.849 -7.768 5.307 1.054 -0.122 C23 T3H 7 T3H C25 C7 C 0 1 Y N N 8.537 6.358 -9.269 6.399 -0.868 0.020 C25 T3H 8 T3H C16 C8 C 0 1 N N N 14.516 1.539 -6.254 -0.851 2.151 0.684 C16 T3H 9 T3H C20 C9 C 0 1 Y N N 11.546 3.780 -7.218 2.822 1.767 0.880 C20 T3H 10 T3H C01 C10 C 0 1 N N N 9.196 -4.168 -10.584 -8.816 -1.739 -2.245 C01 T3H 11 T3H C03 C11 C 0 1 N N N 9.067 -3.856 -8.187 -7.607 -2.360 -0.268 C03 T3H 12 T3H C05 C12 C 0 1 N N N 7.140 -4.837 -6.848 -8.493 -4.164 1.150 C05 T3H 13 T3H C07 C13 C 0 1 Y N N 10.806 -2.572 -6.693 -5.762 -1.044 0.537 C07 T3H 14 T3H C08 C14 C 0 1 Y N N 11.955 -3.160 -7.221 -4.420 -1.155 0.879 C08 T3H 15 T3H C09 C15 C 0 1 Y N N 13.185 -2.552 -7.051 -3.584 -0.063 0.756 C09 T3H 16 T3H C10 C16 C 0 1 Y N N 13.268 -1.354 -6.324 -4.084 1.146 0.290 C10 T3H 17 T3H C21 C17 C 0 1 Y N N 10.438 3.316 -6.465 3.578 2.684 0.165 C21 T3H 18 T3H C22 C18 C 0 1 Y N N 9.158 3.867 -6.743 4.815 2.333 -0.334 C22 T3H 19 T3H C26 C19 C 0 1 Y N N 7.812 7.247 -10.017 7.441 -1.900 -0.130 C26 T3H 20 T3H C27 C20 C 0 1 Y N N 6.447 7.468 -9.881 7.374 -3.207 0.272 C27 T3H 21 T3H C31 C21 C 0 1 N N N 9.664 8.176 -11.523 9.211 -0.522 -1.290 C31 T3H 22 T3H C33 C22 C 0 1 Y N N 10.165 5.263 -8.464 4.544 0.119 0.601 C33 T3H 23 T3H C34 C23 C 0 1 Y N N 11.423 4.719 -8.202 3.293 0.493 1.100 C34 T3H 24 T3H C35 C24 C 0 1 Y N N 12.126 -0.773 -5.771 -5.425 1.257 -0.052 C35 T3H 25 T3H C36 C25 C 0 1 Y N N 10.885 -1.390 -5.946 -6.261 0.165 0.071 C36 T3H 26 T3H N02 N1 N 0 1 N N N 9.700 -3.637 -9.283 -7.690 -1.593 -1.319 N02 T3H 27 T3H N04 N2 N 0 1 N N N 7.807 -4.633 -8.146 -8.515 -3.376 -0.085 N04 T3H 28 T3H N06 N3 N 0 1 N N N 9.539 -3.315 -6.877 -6.609 -2.153 0.657 N06 T3H 29 T3H N11 N4 N 0 1 N N N 14.587 -0.748 -6.149 -3.236 2.252 0.165 N11 T3H 30 T3H N18 N5 N 0 1 N N N 13.205 2.162 -6.175 0.441 1.874 0.420 N18 T3H 31 T3H N24 N6 N 0 1 Y N N 8.031 5.580 -8.296 6.477 0.408 -0.475 N24 T3H 32 T3H N28 N7 N 0 1 Y N N 6.115 8.406 -10.760 8.537 -3.765 -0.067 N28 T3H 33 T3H N29 N8 N 0 1 Y N N 7.244 8.771 -11.446 9.281 -2.886 -0.637 N29 T3H 34 T3H N30 N9 N 0 1 Y N N 8.285 8.038 -10.993 8.674 -1.754 -0.706 N30 T3H 35 T3H N32 N10 N 0 1 Y N N 9.850 6.179 -9.378 5.261 -1.030 0.652 N32 T3H 36 T3H H122 H1 H 0 0 N N N 16.000 -2.454 -5.701 -4.358 4.014 -0.199 H122 T3H 37 T3H H121 H2 H 0 0 N N N 16.118 -1.854 -7.390 -4.458 2.774 -1.487 H121 T3H 38 T3H H132 H3 H 0 0 N N N 17.805 -1.285 -5.482 -2.859 4.302 -2.431 H132 T3H 39 T3H H131 H4 H 0 0 N N N 17.398 -0.195 -6.850 -2.120 4.650 -0.833 H131 T3H 40 T3H H142 H5 H 0 0 N N N 16.489 -0.058 -3.942 -1.919 2.087 -2.511 H142 T3H 41 T3H H141 H6 H 0 0 N N N 16.800 1.281 -5.098 -0.604 2.977 -1.679 H141 T3H 42 T3H H151 H7 H 0 0 N N N 14.212 0.326 -4.456 -1.912 0.783 -0.573 H151 T3H 43 T3H H191 H8 H 0 0 N N N 13.405 3.045 -8.079 1.264 1.610 2.331 H191 T3H 44 T3H H192 H9 H 0 0 N N N 13.623 4.163 -6.690 1.472 3.236 1.638 H192 T3H 45 T3H H012 H10 H 0 0 N N N 9.880 -3.870 -11.392 -8.859 -2.766 -2.605 H012 T3H 46 T3H H011 H11 H 0 0 N N N 9.142 -5.266 -10.536 -9.745 -1.495 -1.728 H011 T3H 47 T3H H013 H12 H 0 0 N N N 8.194 -3.760 -10.783 -8.682 -1.063 -3.089 H013 T3H 48 T3H H053 H13 H 0 0 N N N 6.225 -5.430 -6.994 -7.501 -4.592 1.291 H053 T3H 49 T3H H051 H14 H 0 0 N N N 7.818 -5.372 -6.167 -8.735 -3.520 1.996 H051 T3H 50 T3H H052 H15 H 0 0 N N N 6.879 -3.861 -6.413 -9.229 -4.965 1.083 H052 T3H 51 T3H H081 H16 H 0 0 N N N 11.884 -4.091 -7.763 -4.032 -2.095 1.242 H081 T3H 52 T3H H091 H17 H 0 0 N N N 14.075 -2.995 -7.474 -2.541 -0.150 1.022 H091 T3H 53 T3H H211 H18 H 0 0 N N N 10.563 2.564 -5.700 3.195 3.680 -0.002 H211 T3H 54 T3H H221 H19 H 0 0 N N N 8.288 3.548 -6.189 5.398 3.053 -0.888 H221 T3H 55 T3H H271 H20 H 0 0 N N N 5.782 6.971 -9.191 6.544 -3.691 0.767 H271 T3H 56 T3H H311 H21 H 0 0 N N N 9.680 8.944 -12.310 8.863 -0.426 -2.319 H311 T3H 57 T3H H313 H22 H 0 0 N N N 10.342 8.472 -10.709 8.869 0.335 -0.709 H313 T3H 58 T3H H312 H23 H 0 0 N N N 9.993 7.214 -11.943 10.300 -0.558 -1.276 H312 T3H 59 T3H H341 H24 H 0 0 N N N 12.286 5.036 -8.769 2.698 -0.216 1.657 H341 T3H 60 T3H H351 H25 H 0 0 N N N 12.201 0.148 -5.211 -5.814 2.197 -0.414 H351 T3H 61 T3H H361 H26 H 0 0 N N N 9.996 -0.960 -5.510 -7.305 0.252 -0.195 H361 T3H 62 T3H H041 H27 H 0 0 N N N 7.416 -5.013 -8.984 -9.169 -3.572 -0.774 H041 T3H 63 T3H H061 H28 H 0 0 N N N 8.963 -3.464 -6.074 -6.494 -2.775 1.392 H061 T3H 64 T3H H181 H29 H 0 0 N N N 12.484 1.837 -5.563 0.689 1.480 -0.431 H181 T3H 65 T3H H241 H30 H 0 0 N N N 7.073 5.545 -8.011 7.213 0.785 -0.981 H241 T3H 66 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T3H C31 N30 SING N N 1 T3H N29 N30 SING Y N 2 T3H N29 N28 DOUB Y N 3 T3H N30 C26 SING Y N 4 T3H N28 C27 SING Y N 5 T3H C01 N02 SING N N 6 T3H C26 C27 DOUB Y N 7 T3H C26 C25 SING N N 8 T3H N32 C25 DOUB Y N 9 T3H N32 C33 SING Y N 10 T3H N02 C03 DOUB N N 11 T3H C25 N24 SING Y N 12 T3H C33 C34 DOUB Y N 13 T3H C33 C23 SING Y N 14 T3H N24 C23 SING Y N 15 T3H C34 C20 SING Y N 16 T3H C03 N04 SING N N 17 T3H C03 N06 SING N N 18 T3H N04 C05 SING N N 19 T3H C23 C22 DOUB Y N 20 T3H C08 C09 DOUB Y N 21 T3H C08 C07 SING Y N 22 T3H C20 C19 SING N N 23 T3H C20 C21 DOUB Y N 24 T3H C19 N18 SING N N 25 T3H C09 C10 SING Y N 26 T3H O17 C16 DOUB N N 27 T3H N06 C07 SING N N 28 T3H C22 C21 SING Y N 29 T3H C07 C36 DOUB Y N 30 T3H C12 N11 SING N N 31 T3H C12 C13 SING N N 32 T3H C10 N11 SING N N 33 T3H C10 C35 DOUB Y N 34 T3H C16 N18 SING N N 35 T3H C16 C15 SING N N 36 T3H N11 C15 SING N N 37 T3H C13 C14 SING N N 38 T3H C36 C35 SING Y N 39 T3H C15 C14 SING N N 40 T3H C12 H122 SING N N 41 T3H C12 H121 SING N N 42 T3H C13 H132 SING N N 43 T3H C13 H131 SING N N 44 T3H C14 H142 SING N N 45 T3H C14 H141 SING N N 46 T3H C15 H151 SING N N 47 T3H C19 H191 SING N N 48 T3H C19 H192 SING N N 49 T3H C01 H012 SING N N 50 T3H C01 H011 SING N N 51 T3H C01 H013 SING N N 52 T3H C05 H053 SING N N 53 T3H C05 H051 SING N N 54 T3H C05 H052 SING N N 55 T3H C08 H081 SING N N 56 T3H C09 H091 SING N N 57 T3H C21 H211 SING N N 58 T3H C22 H221 SING N N 59 T3H C27 H271 SING N N 60 T3H C31 H311 SING N N 61 T3H C31 H313 SING N N 62 T3H C31 H312 SING N N 63 T3H C34 H341 SING N N 64 T3H C35 H351 SING N N 65 T3H C36 H361 SING N N 66 T3H N04 H041 SING N N 67 T3H N06 H061 SING N N 68 T3H N18 H181 SING N N 69 T3H N24 H241 SING N N 70 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T3H InChI InChI 1.03 "InChI=1S/C25H30N10O/c1-26-25(27-2)30-17-7-9-18(10-8-17)35-12-4-5-21(35)24(36)28-14-16-6-11-19-20(13-16)32-23(31-19)22-15-29-33-34(22)3/h6-11,13,15,21H,4-5,12,14H2,1-3H3,(H,28,36)(H,31,32)(H2,26,27,30)/t21-/m0/s1" T3H InChIKey InChI 1.03 MXOKQNYTQUSCFY-NRFANRHFSA-N T3H SMILES_CANONICAL CACTVS 3.385 "CNC(Nc1ccc(cc1)N2CCC[C@H]2C(=O)NCc3ccc4[nH]c(nc4c3)c5cnnn5C)=NC" T3H SMILES CACTVS 3.385 "CNC(Nc1ccc(cc1)N2CCC[CH]2C(=O)NCc3ccc4[nH]c(nc4c3)c5cnnn5C)=NC" T3H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN/C(=N\C)/Nc1ccc(cc1)N2CCC[C@H]2C(=O)NCc3ccc4c(c3)nc([nH]4)c5cnnn5C" T3H SMILES "OpenEye OEToolkits" 2.0.7 "CNC(=NC)Nc1ccc(cc1)N2CCCC2C(=O)NCc3ccc4c(c3)nc([nH]4)c5cnnn5C" # _pdbx_chem_comp_identifier.comp_id T3H _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-1-[4-[[(~{E})-~{N},~{N}'-dimethylcarbamimidoyl]amino]phenyl]-~{N}-[[2-(3-methyl-1,2,3-triazol-4-yl)-1~{H}-benzimidazol-5-yl]methyl]pyrrolidine-2-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T3H "Create component" 2020-12-14 PDBE T3H "Initial release" 2021-10-20 RCSB ##