data_T5C # _chem_comp.id T5C _chem_comp.name "2-{(1E,3Z,5E,7E)-7-[3,3-DIMETHYL-5-SULFO-1-(2-SULFOETHYL)-1,3-DIHYDRO-2H-INDOL-2-YLIDENE]-4-METHYLHEPTA-1,3,5-TRIEN-1-YL}-3,3-DIMETHYL-5-SULFO-1-(2-SULFOETHYL)-3H-INDOLIUM" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H39 N2 O12 S4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms TETRASULFOCYANINE _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2006-12-03 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 771.918 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T5C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T5C O36 O36 O 0 1 N N N 91.943 -8.498 100.574 -2.744 -4.877 2.552 O36 T5C 1 T5C S35 S35 S 0 1 N N N 91.751 -9.878 100.044 -3.641 -5.258 1.477 S35 T5C 2 T5C O37 O37 O 0 1 N N N 90.884 -10.651 100.987 -5.063 -4.484 1.681 O37 T5C 3 T5C O38 O38 O 0 1 N N N 91.082 -9.829 98.712 -3.909 -6.650 1.167 O38 T5C 4 T5C C13 C13 C 0 1 N N N 93.378 -10.688 99.903 -3.142 -4.433 -0.003 C13 T5C 5 T5C C12 C12 C 0 1 N N N 94.201 -10.398 98.636 -1.727 -4.792 -0.413 C12 T5C 6 T5C N1 N1 N 0 1 N N N 95.178 -11.498 98.570 -1.335 -4.144 -1.647 N1 T5C 7 T5C C9 C9 C 0 1 Y N N 96.347 -11.475 99.228 -0.857 -2.830 -1.642 C9 T5C 8 T5C C8 C8 C 0 1 Y N N 96.929 -10.486 100.026 -0.676 -1.963 -0.575 C8 T5C 9 T5C C7 C7 C 0 1 Y N N 98.195 -10.677 100.574 -0.177 -0.681 -0.829 C7 T5C 10 T5C C6 C6 C 0 1 Y N N 98.900 -11.848 100.317 0.135 -0.276 -2.135 C6 T5C 11 T5C S39 S39 S 0 1 N N N 100.476 -12.075 101.018 0.757 1.332 -2.417 S39 T5C 12 T5C O41 O41 O 0 1 N N N 101.156 -10.749 101.152 1.373 1.797 -1.183 O41 T5C 13 T5C O40 O40 O 0 1 N N N 100.328 -12.692 102.374 -0.563 2.263 -2.671 O40 T5C 14 T5C O42 O42 O 0 1 N N N 101.293 -12.989 100.165 1.519 1.280 -3.654 O42 T5C 15 T5C C5 C5 C 0 1 Y N N 98.337 -12.830 99.509 -0.047 -1.146 -3.210 C5 T5C 16 T5C C4 C4 C 0 1 Y N N 97.068 -12.639 98.955 -0.541 -2.415 -2.950 C4 T5C 17 T5C C3 C3 C 0 1 N N N 96.201 -13.502 98.048 -0.834 -3.553 -3.918 C3 T5C 18 T5C C11 C11 C 0 1 N N N 96.960 -13.751 96.738 0.451 -3.990 -4.635 C11 T5C 19 T5C C10 C10 C 0 1 N N N 95.857 -14.809 98.774 -1.910 -3.133 -4.928 C10 T5C 20 T5C C2 C2 C 0 1 N N N 94.972 -12.596 97.839 -1.353 -4.651 -2.948 C2 T5C 21 T5C C14 C14 C 0 1 N N N 93.876 -12.918 97.026 -1.739 -5.869 -3.359 C14 T5C 22 T5C C15 C15 C 0 1 N N N 93.747 -14.095 96.297 -1.712 -6.283 -4.742 C15 T5C 23 T5C C16 C16 C 0 1 N N N 92.619 -14.316 95.518 -2.101 -7.505 -5.142 C16 T5C 24 T5C C17 C17 C 0 1 N N N 92.466 -15.485 94.780 -2.106 -8.007 -6.517 C17 T5C 25 T5C C34 C34 C 0 1 N N N 93.543 -16.588 94.791 -1.629 -7.069 -7.602 C34 T5C 26 T5C C18 C18 C 0 1 N N N 91.311 -15.633 94.026 -2.508 -9.247 -6.870 C18 T5C 27 T5C C19 C19 C 0 1 N N N 91.099 -16.776 93.267 -2.552 -9.840 -8.193 C19 T5C 28 T5C C20 C20 C 0 1 N N N 89.932 -16.891 92.526 -2.977 -11.093 -8.402 C20 T5C 29 T5C C22 C22 C 0 1 N N N 89.585 -17.982 91.722 -2.988 -11.612 -9.768 C22 T5C 30 T5C C23 C23 C 0 1 N N N 90.444 -19.250 91.517 -4.217 -11.463 -10.692 C23 T5C 31 T5C C31 C31 C 0 1 N N N 90.681 -19.998 92.839 -4.527 -9.988 -10.963 C31 T5C 32 T5C C30 C30 C 0 1 N N N 91.769 -18.935 90.799 -5.433 -12.192 -10.113 C30 T5C 33 T5C C24 C24 C 0 1 Y N N 89.545 -20.083 90.613 -3.705 -12.149 -11.924 C24 T5C 34 T5C C25 C25 C 0 1 Y N N 89.675 -21.362 90.065 -4.312 -12.373 -13.149 C25 T5C 35 T5C C26 C26 C 0 1 Y N N 88.663 -21.871 89.257 -3.586 -13.050 -14.132 C26 T5C 36 T5C S47 S47 S 0 1 N N N 88.783 -23.453 88.554 -4.315 -13.353 -15.691 S47 T5C 37 T5C O48 O48 O 0 1 N N N 88.874 -23.320 87.067 -3.646 -14.503 -16.283 O48 T5C 38 T5C O50 O50 O 0 1 N N N 90.008 -24.149 89.066 -3.929 -12.054 -16.604 O50 T5C 39 T5C O49 O49 O 0 1 N N N 87.556 -24.233 88.909 -5.755 -13.354 -15.491 O49 T5C 40 T5C C27 C27 C 0 1 Y N N 87.530 -21.113 89.001 -2.277 -13.491 -13.880 C27 T5C 41 T5C C28 C28 C 0 1 Y N N 87.399 -19.841 89.543 -1.671 -13.262 -12.642 C28 T5C 42 T5C C29 C29 C 0 1 Y N N 88.415 -19.310 90.336 -2.407 -12.588 -11.681 C29 T5C 43 T5C N21 N21 N 1 1 N N N 88.484 -18.144 90.987 -2.021 -12.241 -10.370 N21 T5C 44 T5C C32 C32 C 0 1 N N N 87.424 -17.123 90.916 -0.680 -12.605 -9.886 C32 T5C 45 T5C C33 C33 C 0 1 N N N 87.808 -16.257 89.703 0.331 -11.577 -10.351 C33 T5C 46 T5C S43 S43 S 0 1 N N N 86.917 -14.679 89.490 1.963 -11.904 -9.756 S43 T5C 47 T5C O46 O46 O 0 1 N N N 86.833 -13.964 90.798 2.386 -13.205 -10.239 O46 T5C 48 T5C O44 O44 O 0 1 N N N 85.544 -14.966 88.978 2.022 -11.560 -8.348 O44 T5C 49 T5C O45 O45 O 0 1 N N N 87.647 -13.816 88.510 2.734 -10.749 -10.612 O45 T5C 50 T5C H131 1H13 H 0 0 N N N 93.255 -11.790 100.021 -3.852 -4.739 -0.777 H131 T5C 51 T5C H132 2H13 H 0 0 N N N 93.990 -10.450 100.805 -3.254 -3.360 0.175 H132 T5C 52 T5C H121 1H12 H 0 0 N N N 94.659 -9.381 98.614 -1.001 -4.507 0.355 H121 T5C 53 T5C H122 2H12 H 0 0 N N N 93.588 -10.279 97.713 -1.645 -5.870 -0.581 H122 T5C 54 T5C H8 H8 H 0 1 N N N 96.385 -9.547 100.225 -0.912 -2.258 0.442 H8 T5C 55 T5C H7 H7 H 0 1 N N N 98.641 -9.898 101.214 -0.028 0.013 -0.006 H7 T5C 56 T5C H5 H5 H 0 1 N N N 98.896 -13.759 99.308 0.196 -0.830 -4.218 H5 T5C 57 T5C H111 1H11 H 0 0 N N N 97.243 -12.792 96.246 0.217 -4.443 -5.602 H111 T5C 58 T5C H112 2H11 H 0 0 N N N 96.285 -14.160 95.950 1.107 -3.130 -4.807 H112 T5C 59 T5C H113 3H11 H 0 0 N N N 97.849 -14.406 96.889 0.996 -4.724 -4.034 H113 T5C 60 T5C H101 1H10 H 0 0 N N N 95.042 -15.357 98.247 -2.252 -3.996 -5.507 H101 T5C 61 T5C H102 2H10 H 0 0 N N N 95.341 -14.605 99.741 -2.773 -2.700 -4.412 H102 T5C 62 T5C H103 3H10 H 0 0 N N N 96.746 -15.464 98.925 -1.515 -2.387 -5.623 H103 T5C 63 T5C H14 H14 H 0 1 N N N 93.051 -12.189 96.954 -2.090 -6.578 -2.617 H14 T5C 64 T5C H15 H15 H 0 1 N N N 94.543 -14.857 96.337 -1.355 -5.547 -5.458 H15 T5C 65 T5C H16 H16 H 0 1 N N N 91.829 -13.547 95.485 -2.447 -8.191 -4.373 H16 T5C 66 T5C H341 1H34 H 0 0 N N N 93.732 -16.874 95.852 -2.253 -6.170 -7.640 H341 T5C 67 T5C H342 2H34 H 0 0 N N N 94.514 -16.123 94.501 -0.588 -6.774 -7.430 H342 T5C 68 T5C H343 3H34 H 0 0 N N N 93.420 -17.525 94.199 -1.669 -7.527 -8.597 H343 T5C 69 T5C H18 H18 H 0 1 N N N 90.552 -14.832 94.030 -2.849 -9.912 -6.075 H18 T5C 70 T5C H191 1H19 H 0 0 N N N 91.190 -17.667 93.930 -2.228 -9.242 -9.038 H191 T5C 71 T5C H201 1H20 H 0 0 N N N 89.878 -15.987 91.876 -3.315 -11.748 -7.608 H201 T5C 72 T5C H311 1H31 H 0 0 N N N 89.719 -20.238 93.348 -4.813 -9.480 -10.037 H311 T5C 73 T5C H312 2H31 H 0 0 N N N 91.125 -19.327 93.611 -3.651 -9.482 -11.378 H312 T5C 74 T5C H313 3H31 H 0 0 N N N 91.301 -20.913 92.691 -5.350 -9.893 -11.677 H313 T5C 75 T5C H301 1H30 H 0 0 N N N 92.340 -18.140 91.333 -5.118 -12.947 -9.387 H301 T5C 76 T5C H302 2H30 H 0 0 N N N 91.591 -18.405 89.834 -6.100 -11.486 -9.609 H302 T5C 77 T5C H303 3H30 H 0 0 N N N 92.389 -19.850 90.651 -5.995 -12.691 -10.907 H303 T5C 78 T5C H25 H25 H 0 1 N N N 90.574 -21.968 90.270 -5.324 -12.029 -13.337 H25 T5C 79 T5C H27 H27 H 0 1 N N N 86.729 -21.524 88.363 -1.720 -14.018 -14.651 H27 T5C 80 T5C H28 H28 H 0 1 N N N 86.488 -19.252 89.344 -0.659 -13.608 -12.465 H28 T5C 81 T5C H321 1H32 H 0 0 N N N 87.282 -16.547 91.860 -0.459 -13.610 -10.258 H321 T5C 82 T5C H322 2H32 H 0 0 N N N 86.391 -17.541 90.869 -0.737 -12.629 -8.794 H322 T5C 83 T5C H331 1H33 H 0 0 N N N 87.717 -16.863 88.771 0.066 -10.590 -9.961 H331 T5C 84 T5C H332 2H33 H 0 0 N N N 88.906 -16.064 89.718 0.393 -11.513 -11.443 H332 T5C 85 T5C H37 H37 H 0 1 N N N 91.359 -10.815 101.793 -4.995 -3.539 1.955 H37 T5C 86 T5C H40 H40 H 0 1 N N N 100.297 -13.638 102.290 -1.176 2.342 -1.903 H40 T5C 87 T5C H45 H45 H 0 1 N N N 87.802 -12.961 88.894 2.804 -10.917 -11.581 H45 T5C 88 T5C H50 H50 H 0 1 N N N 90.612 -24.296 88.348 -2.965 -11.932 -16.776 H50 T5C 89 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T5C O36 S35 DOUB N N 1 T5C S35 O37 SING N N 2 T5C S35 O38 DOUB N N 3 T5C S35 C13 SING N N 4 T5C O37 H37 SING N N 5 T5C C13 C12 SING N N 6 T5C C13 H131 SING N N 7 T5C C13 H132 SING N N 8 T5C C12 N1 SING N N 9 T5C C12 H121 SING N N 10 T5C C12 H122 SING N N 11 T5C N1 C9 SING N N 12 T5C N1 C2 SING N N 13 T5C C9 C8 SING Y N 14 T5C C9 C4 DOUB Y N 15 T5C C8 C7 DOUB Y N 16 T5C C8 H8 SING N N 17 T5C C7 C6 SING Y N 18 T5C C7 H7 SING N N 19 T5C C6 S39 SING N N 20 T5C C6 C5 DOUB Y N 21 T5C S39 O41 DOUB N N 22 T5C S39 O40 SING N N 23 T5C S39 O42 DOUB N N 24 T5C O40 H40 SING N N 25 T5C C5 C4 SING Y N 26 T5C C5 H5 SING N N 27 T5C C4 C3 SING N N 28 T5C C3 C11 SING N N 29 T5C C3 C10 SING N N 30 T5C C3 C2 SING N N 31 T5C C11 H111 SING N N 32 T5C C11 H112 SING N N 33 T5C C11 H113 SING N N 34 T5C C10 H101 SING N N 35 T5C C10 H102 SING N N 36 T5C C10 H103 SING N N 37 T5C C2 C14 DOUB N E 38 T5C C14 C15 SING N N 39 T5C C14 H14 SING N N 40 T5C C15 C16 DOUB N E 41 T5C C15 H15 SING N N 42 T5C C16 C17 SING N N 43 T5C C16 H16 SING N N 44 T5C C17 C34 SING N N 45 T5C C17 C18 DOUB N E 46 T5C C34 H341 SING N N 47 T5C C34 H342 SING N N 48 T5C C34 H343 SING N N 49 T5C C18 C19 SING N N 50 T5C C18 H18 SING N N 51 T5C C19 H191 SING N N 52 T5C C19 C20 DOUB N N 53 T5C C20 H201 SING N N 54 T5C C20 C22 SING N N 55 T5C C22 C23 SING N N 56 T5C C22 N21 DOUB N N 57 T5C C23 C31 SING N N 58 T5C C23 C30 SING N N 59 T5C C23 C24 SING N N 60 T5C C31 H311 SING N N 61 T5C C31 H312 SING N N 62 T5C C31 H313 SING N N 63 T5C C30 H301 SING N N 64 T5C C30 H302 SING N N 65 T5C C30 H303 SING N N 66 T5C C24 C25 SING Y N 67 T5C C24 C29 DOUB Y N 68 T5C C25 H25 SING N N 69 T5C C25 C26 DOUB Y N 70 T5C C26 S47 SING N N 71 T5C C26 C27 SING Y N 72 T5C S47 O48 DOUB N N 73 T5C S47 O50 SING N N 74 T5C S47 O49 DOUB N N 75 T5C O50 H50 SING N N 76 T5C C27 H27 SING N N 77 T5C C27 C28 DOUB Y N 78 T5C C28 H28 SING N N 79 T5C C28 C29 SING Y N 80 T5C C29 N21 SING N N 81 T5C N21 C32 SING N N 82 T5C C32 H321 SING N N 83 T5C C32 H322 SING N N 84 T5C C32 C33 SING N N 85 T5C C33 H331 SING N N 86 T5C C33 H332 SING N N 87 T5C C33 S43 SING N N 88 T5C S43 O46 DOUB N N 89 T5C S43 O44 DOUB N N 90 T5C S43 O45 SING N N 91 T5C O45 H45 SING N N 92 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T5C SMILES ACDLabs 10.04 "O=S(=O)(O)CC[N+]=2c1ccc(cc1C(C=2\C=C\C=C(\C=C\C=C4\N(c3ccc(cc3C4(C)C)S(=O)(=O)O)CCS(=O)(=O)O)C)(C)C)S(=O)(=O)O" T5C SMILES_CANONICAL CACTVS 3.341 "CC(/C=C/C=C1/N(CC[S](O)(=O)=O)c2ccc(cc2C1(C)C)[S](O)(=O)=O)=C\C=C\C3=[N+](CC[S](O)(=O)=O)c4ccc(cc4C3(C)C)[S](O)(=O)=O" T5C SMILES CACTVS 3.341 "CC(C=CC=C1N(CC[S](O)(=O)=O)c2ccc(cc2C1(C)C)[S](O)(=O)=O)=CC=CC3=[N+](CC[S](O)(=O)=O)c4ccc(cc4C3(C)C)[S](O)(=O)=O" T5C SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C\C(=C/C=CC1=[N+](c2ccc(cc2C1(C)C)S(=O)(=O)O)CCS(=O)(=O)O)\C=C\C=C\3/C(c4cc(ccc4N3CCS(=O)(=O)O)S(=O)(=O)O)(C)C" T5C SMILES "OpenEye OEToolkits" 1.5.0 "CC(=CC=CC1=[N+](c2ccc(cc2C1(C)C)S(=O)(=O)O)CCS(=O)(=O)O)C=CC=C3C(c4cc(ccc4N3CCS(=O)(=O)O)S(=O)(=O)O)(C)C" T5C InChI InChI 1.03 "InChI=1S/C32H38N2O12S4/c1-22(8-6-10-29-31(2,3)25-20-23(49(41,42)43)12-14-27(25)33(29)16-18-47(35,36)37)9-7-11-30-32(4,5)26-21-24(50(44,45)46)13-15-28(26)34(30)17-19-48(38,39)40/h6-15,20-21H,16-19H2,1-5H3,(H3-,35,36,37,38,39,40,41,42,43,44,45,46)/p+1" T5C InChIKey InChI 1.03 WKWHOLCUESSZIQ-UHFFFAOYSA-O # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier T5C "SYSTEMATIC NAME" ACDLabs 10.04 "2-{(1E,3E,5E,7E)-7-[3,3-dimethyl-5-sulfo-1-(2-sulfoethyl)-1,3-dihydro-2H-indol-2-ylidene]-4-methylhepta-1,3,5-trien-1-yl}-3,3-dimethyl-5-sulfo-1-(2-sulfoethyl)-3H-indolium" T5C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2E)-2-[(2E,4E)-7-[3,3-dimethyl-5-sulfo-1-(2-sulfoethyl)indol-1-ium-2-yl]-4-methyl-hepta-2,4,6-trienylidene]-3,3-dimethyl-1-(2-sulfoethyl)indole-5-sulfonic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T5C "Create component" 2006-12-03 PDBJ T5C "Modify descriptor" 2011-06-04 RCSB T5C "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id T5C _pdbx_chem_comp_synonyms.name TETRASULFOCYANINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##