data_T5P
#
_chem_comp.id T5P
_chem_comp.name "3-{2,6,8-TRIOXO-9-[(2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL]-1,2,3,6,8,9-HEXAHYDRO-7H-PURIN-7-YL}PROPYL DIHYDROGEN PHOSPHATE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H21 N4 O11 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2004-06-18
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 440.300
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code T5P
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
T5P O33 O33 O 0 1 N N N 8.437 3.414 17.919 -0.240 -1.026 -7.077 O33 T5P 1
T5P P P P 0 1 N N N 9.126 4.272 18.964 -1.253 0.142 -6.629 P T5P 2
T5P O31 O31 O 0 1 N N N 9.859 3.526 20.025 -1.297 1.280 -7.767 O31 T5P 3
T5P O32 O32 O 0 1 N N N 9.903 5.423 18.469 -2.608 -0.423 -6.445 O32 T5P 4
T5P O27 O27 O 0 1 N N N 7.861 4.925 19.736 -0.749 0.787 -5.243 O27 T5P 5
T5P C17 C17 C 0 1 N N N 7.123 6.008 19.155 -0.731 -0.266 -4.278 C17 T5P 6
T5P C16 C16 C 0 1 N N N 6.020 6.413 20.114 -0.258 0.283 -2.931 C16 T5P 7
T5P C15 C15 C 0 1 N N N 6.714 6.857 21.373 -0.239 -0.845 -1.898 C15 T5P 8
T5P N5 N5 N 0 1 Y N N 5.880 7.295 22.486 0.213 -0.319 -0.608 N5 T5P 9
T5P C6 C6 C 0 1 Y N N 5.828 6.718 23.718 -0.569 0.195 0.360 C6 T5P 10
T5P O6 O6 O 0 1 N N N 6.494 5.650 24.020 -1.780 0.301 0.309 O6 T5P 11
T5P C9 C9 C 0 1 Y N N 5.074 8.357 22.573 1.537 -0.259 -0.159 C9 T5P 12
T5P C4 C4 C 0 1 Y N N 4.559 9.498 21.765 2.771 -0.641 -0.722 C4 T5P 13
T5P O4 O4 O 0 1 N N N 4.921 9.686 20.578 2.814 -1.145 -1.831 O4 T5P 14
T5P N3 N3 N 0 1 Y N N 3.709 10.366 22.331 3.905 -0.449 -0.017 N3 T5P 15
T5P C2 C2 C 0 1 Y N N 3.258 10.273 23.601 3.865 0.106 1.206 C2 T5P 16
T5P O2 O2 O 0 1 N N N 2.455 11.108 24.071 4.901 0.272 1.821 O2 T5P 17
T5P C8 C8 C 0 1 Y N N 4.552 8.318 23.932 1.515 0.304 1.086 C8 T5P 18
T5P N1 N1 N 0 1 Y N N 3.647 9.303 24.410 2.699 0.483 1.764 N1 T5P 19
T5P N7 N7 N 0 1 Y N N 5.009 7.278 24.620 0.206 0.573 1.394 N7 T5P 20
T5P C10 C10 C 0 1 N N N 4.828 6.945 26.016 -0.268 1.179 2.640 C10 T5P 21
T5P C11 C11 C 0 1 N N S 3.477 6.470 26.496 -0.572 0.078 3.659 C11 T5P 22
T5P O19 O19 O 0 1 N N N 2.463 7.432 26.285 -1.580 -0.789 3.136 O19 T5P 23
T5P C12 C12 C 0 1 N N S 3.607 6.192 27.993 -1.068 0.711 4.960 C12 T5P 24
T5P O21 O21 O 0 1 N N N 4.135 7.309 28.692 -0.060 1.578 5.483 O21 T5P 25
T5P C13 C13 C 0 1 N N R 4.490 4.997 28.299 -1.372 -0.389 5.979 C13 T5P 26
T5P O23 O23 O 0 1 N N N 4.079 3.889 27.518 -2.380 -1.257 5.456 O23 T5P 27
T5P C14 C14 C 0 1 N N N 4.393 4.647 29.779 -1.869 0.243 7.280 C14 T5P 28
T5P O26 O26 O 0 1 N N N 3.042 4.440 30.144 -2.152 -0.784 8.232 O26 T5P 29
T5P H33 H33 H 0 1 N N N 7.970 3.890 17.242 0.628 -0.615 -7.186 H33 T5P 30
T5P H31 H31 H 0 1 N N N 10.290 4.063 20.679 -1.604 0.852 -8.578 H31 T5P 31
T5P H171 1H17 H 0 0 N N N 6.736 5.764 18.138 -0.051 -1.051 -4.610 H171 T5P 32
T5P H172 2H17 H 0 0 N N N 7.776 6.865 18.869 -1.735 -0.677 -4.171 H172 T5P 33
T5P H161 1H16 H 0 0 N N N 5.259 5.615 20.281 -0.938 1.067 -2.599 H161 T5P 34
T5P H162 2H16 H 0 0 N N N 5.323 7.176 19.696 0.745 0.693 -3.039 H162 T5P 35
T5P H151 1H15 H 0 0 N N N 7.448 7.659 21.125 0.440 -1.630 -2.230 H151 T5P 36
T5P H152 2H15 H 0 0 N N N 7.397 6.048 21.722 -1.243 -1.256 -1.791 H152 T5P 37
T5P H3 H3 H 0 1 N N N 3.381 11.149 21.765 4.758 -0.711 -0.397 H3 T5P 38
T5P H1 H1 H 0 1 N N N 3.301 9.262 25.368 2.693 0.882 2.648 H1 T5P 39
T5P H101 1H10 H 0 0 N N N 5.139 7.819 26.634 -1.174 1.752 2.443 H101 T5P 40
T5P H102 2H10 H 0 0 N N N 5.595 6.189 26.304 0.500 1.841 3.039 H102 T5P 41
T5P H11 H11 H 0 1 N N N 3.207 5.526 25.967 0.333 -0.494 3.856 H11 T5P 42
T5P H19 H19 H 0 1 N N N 1.613 7.133 26.587 -2.363 -0.243 2.976 H19 T5P 43
T5P H12 H12 H 0 1 N N N 2.589 5.982 28.396 -1.975 1.284 4.763 H12 T5P 44
T5P H21 H21 H 0 1 N N N 4.216 7.136 29.623 0.721 1.033 5.643 H21 T5P 45
T5P H13 H13 H 0 1 N N N 5.547 5.249 28.050 -0.466 -0.962 6.176 H13 T5P 46
T5P H23 H23 H 0 1 N N N 4.632 3.141 27.710 -3.163 -0.711 5.296 H23 T5P 47
T5P H141 1H14 H 0 0 N N N 4.885 5.414 30.422 -2.775 0.816 7.083 H141 T5P 48
T5P H142 2H14 H 0 0 N N N 5.035 3.774 30.044 -1.100 0.905 7.679 H142 T5P 49
T5P H26 H26 H 0 1 N N N 2.981 4.222 31.067 -2.461 -0.344 9.035 H26 T5P 50
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T5P O33 P SING N N 1
T5P O33 H33 SING N N 2
T5P P O31 SING N N 3
T5P P O32 DOUB N N 4
T5P P O27 SING N N 5
T5P O31 H31 SING N N 6
T5P O27 C17 SING N N 7
T5P C17 C16 SING N N 8
T5P C17 H171 SING N N 9
T5P C17 H172 SING N N 10
T5P C16 C15 SING N N 11
T5P C16 H161 SING N N 12
T5P C16 H162 SING N N 13
T5P C15 N5 SING N N 14
T5P C15 H151 SING N N 15
T5P C15 H152 SING N N 16
T5P N5 C6 SING Y N 17
T5P N5 C9 SING Y N 18
T5P C6 O6 DOUB N N 19
T5P C6 N7 SING Y N 20
T5P C9 C4 SING Y N 21
T5P C9 C8 DOUB Y N 22
T5P C4 O4 DOUB N N 23
T5P C4 N3 SING Y N 24
T5P N3 C2 SING Y N 25
T5P N3 H3 SING N N 26
T5P C2 O2 DOUB N N 27
T5P C2 N1 SING Y N 28
T5P C8 N1 SING Y N 29
T5P C8 N7 SING Y N 30
T5P N1 H1 SING N N 31
T5P N7 C10 SING N N 32
T5P C10 C11 SING N N 33
T5P C10 H101 SING N N 34
T5P C10 H102 SING N N 35
T5P C11 O19 SING N N 36
T5P C11 C12 SING N N 37
T5P C11 H11 SING N N 38
T5P O19 H19 SING N N 39
T5P C12 O21 SING N N 40
T5P C12 C13 SING N N 41
T5P C12 H12 SING N N 42
T5P O21 H21 SING N N 43
T5P C13 O23 SING N N 44
T5P C13 C14 SING N N 45
T5P C13 H13 SING N N 46
T5P O23 H23 SING N N 47
T5P C14 O26 SING N N 48
T5P C14 H141 SING N N 49
T5P C14 H142 SING N N 50
T5P O26 H26 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T5P SMILES ACDLabs 10.04 "O=C1C2=C(NC(=O)N1)N(C(=O)N2CCCOP(=O)(O)O)CC(O)C(O)C(O)CO"
T5P SMILES_CANONICAL CACTVS 3.341 "OC[C@@H](O)[C@@H](O)[C@@H](O)CN1C(=O)N(CCCO[P](O)(O)=O)C2=C1NC(=O)NC2=O"
T5P SMILES CACTVS 3.341 "OC[CH](O)[CH](O)[CH](O)CN1C(=O)N(CCCO[P](O)(O)=O)C2=C1NC(=O)NC2=O"
T5P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(CN1C2=C(NC(=O)NC2=O)N(C1=O)C[C@@H]([C@@H]([C@@H](CO)O)O)O)COP(=O)(O)O"
T5P SMILES "OpenEye OEToolkits" 1.5.0 "C(CN1C2=C(NC(=O)NC2=O)N(C1=O)CC(C(C(CO)O)O)O)COP(=O)(O)O"
T5P InChI InChI 1.03 "InChI=1S/C13H21N4O11P/c18-5-7(20)9(21)6(19)4-17-10-8(11(22)15-12(23)14-10)16(13(17)24)2-1-3-28-29(25,26)27/h6-7,9,18-21H,1-5H2,(H2,25,26,27)(H2,14,15,22,23)/t6-,7+,9-/m0/s1"
T5P InChIKey InChI 1.03 KPHFGOGGKPGLTM-OOZYFLPDSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T5P "SYSTEMATIC NAME" ACDLabs 10.04 "1-deoxy-1-{2,6,8-trioxo-7-[3-(phosphonooxy)propyl]-1,2,3,6,7,8-hexahydro-9H-purin-9-yl}-D-ribitol"
T5P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-[2,6,8-trioxo-9-[(2S,3S,4R)-2,3,4,5-tetrahydroxypentyl]-3H-purin-7-yl]propyl dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T5P "Create component" 2004-06-18 PDBJ
T5P "Modify descriptor" 2011-06-04 RCSB
#