data_T6T # _chem_comp.id T6T _chem_comp.name alpha-D-tagatopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "alpha-D-tagatose; D-tagatose; tagatose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-07-13 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 180.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T6T _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5CI5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 T6T alpha-D-tagatose PDB ? 2 T6T D-tagatose PDB ? 3 T6T tagatose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T6T O3 O4 O 0 1 N N N 61.534 61.291 82.766 -0.066 1.714 -1.075 O3 T6T 1 T6T C3 C4 C 0 1 N N S 62.540 60.797 81.888 0.000 1.117 0.221 C3 T6T 2 T6T C4 C3 C 0 1 N N S 63.255 61.985 81.245 -1.354 0.487 0.565 C4 T6T 3 T6T O4 O3 O 0 1 N N N 62.299 62.852 80.620 -2.376 1.482 0.489 O4 T6T 4 T6T C5 C2 C 0 1 N N R 64.021 62.713 82.328 -1.652 -0.633 -0.437 C5 T6T 5 T6T O5 O2 O 0 1 N N N 64.718 63.831 81.775 -2.878 -1.276 -0.084 O5 T6T 6 T6T C6 C1 C 0 1 N N N 64.983 61.759 83.028 -0.511 -1.653 -0.405 C6 T6T 7 T6T O6 O5 O 0 1 N N N 64.237 60.689 83.606 0.722 -0.997 -0.702 O6 T6T 8 T6T C2 C5 C 0 1 N N S 63.489 59.930 82.651 1.077 0.028 0.228 C2 T6T 9 T6T O2 "O5'" O 0 1 N Y N 64.393 59.293 81.740 1.179 -0.532 1.539 O2 T6T 10 T6T C1 C6 C 0 1 N N N 62.739 58.833 83.438 2.421 0.638 -0.172 C1 T6T 11 T6T O1 O6 O 0 1 N N N 61.912 58.054 82.654 3.426 -0.377 -0.166 O1 T6T 12 T6T HO3 HO4 H 0 1 N Y N 61.082 60.561 83.173 -0.729 2.414 -1.152 HO3 T6T 13 T6T H3 HAF H 0 1 N N N 62.076 60.198 81.090 0.247 1.878 0.962 H3 T6T 14 T6T H4 H3 H 0 1 N N N 63.967 61.607 80.497 -1.319 0.074 1.573 H4 T6T 15 T6T HO4 HO3 H 0 1 N Y N 62.750 63.588 80.223 -3.262 1.152 0.694 HO4 T6T 16 T6T H5 H2 H 0 1 N N N 63.297 63.072 83.075 -1.736 -0.212 -1.439 H5 T6T 17 T6T HO5 HO2 H 0 1 N Y N 65.195 64.280 82.463 -3.130 -1.997 -0.677 HO5 T6T 18 T6T H61 H11 H 0 1 N N N 65.700 61.356 82.297 -0.454 -2.103 0.586 H61 T6T 19 T6T H62 H12 H 0 1 N N N 65.527 62.298 83.818 -0.698 -2.430 -1.146 H62 T6T 20 T6T HO2 "HO5'" H 0 1 N Y N 64.996 58.742 82.225 1.844 -1.230 1.617 HO2 T6T 21 T6T H11 H61 H 0 1 N N N 63.483 58.178 83.915 2.343 1.066 -1.172 H11 T6T 22 T6T H12 H62 H 0 1 N N N 62.127 59.318 84.213 2.691 1.421 0.537 H12 T6T 23 T6T HO1 HO6 H 0 1 N Y N 61.483 57.402 83.196 4.307 -0.062 -0.411 HO1 T6T 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T6T O4 C4 SING N N 1 T6T C4 C3 SING N N 2 T6T C4 C5 SING N N 3 T6T O2 C2 SING N N 4 T6T O5 C5 SING N N 5 T6T C3 C2 SING N N 6 T6T C3 O3 SING N N 7 T6T C5 C6 SING N N 8 T6T C2 C1 SING N N 9 T6T C2 O6 SING N N 10 T6T O1 C1 SING N N 11 T6T C6 O6 SING N N 12 T6T O3 HO3 SING N N 13 T6T C3 H3 SING N N 14 T6T C4 H4 SING N N 15 T6T O4 HO4 SING N N 16 T6T C5 H5 SING N N 17 T6T O5 HO5 SING N N 18 T6T C6 H61 SING N N 19 T6T C6 H62 SING N N 20 T6T O2 HO2 SING N N 21 T6T C1 H11 SING N N 22 T6T C1 H12 SING N N 23 T6T O1 HO1 SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T6T SMILES ACDLabs 12.01 "OC1C(OCC(C1O)O)(CO)O" T6T InChI InChI 1.03 "InChI=1S/C6H12O6/c7-2-6(11)5(10)4(9)3(8)1-12-6/h3-5,7-11H,1-2H2/t3-,4+,5+,6+/m1/s1" T6T InChIKey InChI 1.03 LKDRXBCSQODPBY-VANKVMQKSA-N T6T SMILES_CANONICAL CACTVS 3.385 "OC[C@]1(O)OC[C@@H](O)[C@H](O)[C@@H]1O" T6T SMILES CACTVS 3.385 "OC[C]1(O)OC[CH](O)[CH](O)[CH]1O" T6T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1[C@H]([C@@H]([C@@H]([C@@](O1)(CO)O)O)O)O" T6T SMILES "OpenEye OEToolkits" 2.0.6 "C1C(C(C(C(O1)(CO)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier T6T "SYSTEMATIC NAME" ACDLabs 12.01 alpha-D-tagatopyranose T6T "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S},3~{S},4~{S},5~{R})-2-(hydroxymethyl)oxane-2,3,4,5-tetrol" T6T "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 DTagpa T6T "COMMON NAME" GMML 1.0 a-D-tagatopyranose T6T "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-D-Tagp T6T "SNFG CARBOHYDRATE SYMBOL" GMML 1.0 Tag # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support T6T "CARBOHYDRATE ISOMER" D PDB ? T6T "CARBOHYDRATE RING" pyranose PDB ? T6T "CARBOHYDRATE ANOMER" alpha PDB ? T6T "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T6T "Create component" 2015-07-13 RCSB T6T "Initial release" 2015-07-22 RCSB T6T "Modify atom id" 2017-11-07 RCSB T6T "Other modification" 2019-08-12 RCSB T6T "Other modification" 2019-12-19 RCSB T6T "Other modification" 2020-07-03 RCSB T6T "Modify synonyms" 2020-07-17 RCSB T6T "Modify atom id" 2020-07-17 RCSB T6T "Modify component atom id" 2020-07-17 RCSB ##