data_T6V # _chem_comp.id T6V _chem_comp.name "N-[(3S)-1,1-dioxo-2,3-dihydro-1H-1lambda~6~-thiophen-3-yl]-N-phenylacetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H13 N O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-03-16 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 251.302 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T6V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5RFG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T6V C10 C1 C 0 1 Y N N N N N 8.582 -4.255 25.000 -1.857 2.050 -1.157 C10 T6V 1 T6V C13 C2 C 0 1 N N N N N N 5.165 -6.916 21.960 1.698 -1.644 -0.123 C13 T6V 2 T6V C02 C3 C 0 1 N N N N N N 6.767 -4.319 20.705 -1.210 -2.240 -0.199 C02 T6V 3 T6V C03 C4 C 0 1 N N N N N N 8.187 -4.026 20.284 -0.555 -3.576 0.039 C03 T6V 4 T6V C06 C5 C 0 1 Y N N N N N 7.616 -4.988 22.919 -1.291 0.113 0.139 C06 T6V 5 T6V C07 C6 C 0 1 Y N N N N N 8.607 -5.963 22.825 -2.020 0.618 1.207 C07 T6V 6 T6V C08 C7 C 0 1 Y N N N N N 9.584 -6.053 23.803 -2.672 1.829 1.086 C08 T6V 7 T6V C09 C8 C 0 1 Y N N N N N 9.572 -5.203 24.887 -2.587 2.547 -0.093 C09 T6V 8 T6V C11 C9 C 0 1 Y N N N N N 7.604 -4.141 24.025 -1.211 0.834 -1.045 C11 T6V 9 T6V C12 C10 C 0 1 N N S N N N 5.253 -5.434 22.271 0.695 -1.174 0.883 C12 T6V 10 T6V C14 C11 C 0 1 N N N N N N 4.143 -7.490 22.569 2.478 -0.772 -0.698 C14 T6V 11 T6V C18 C12 C 0 1 N N N N N N 4.899 -5.319 23.766 1.087 0.235 1.396 C18 T6V 12 T6V N05 N1 N 0 1 N N N N N N 6.568 -4.899 21.935 -0.629 -1.114 0.259 N05 T6V 13 T6V O01 O1 O 0 1 N N N N N N 5.832 -4.054 19.959 -2.260 -2.179 -0.803 O01 T6V 14 T6V O16 O2 O 0 1 N N N N N N 4.443 -7.530 25.170 1.243 1.442 -1.029 O16 T6V 15 T6V O17 O3 O 0 1 N N N N N N 2.494 -6.343 24.254 3.298 1.402 0.368 O17 T6V 16 T6V S15 S1 S 0 1 N N N N N N 3.872 -6.731 24.118 2.065 0.829 -0.045 S15 T6V 17 T6V H101 H1 H 0 0 N N N N N N 8.567 -3.595 25.855 -1.796 2.610 -2.078 H101 T6V 18 T6V H131 H2 H 0 0 N N N N N N 5.856 -7.440 21.317 1.777 -2.693 -0.366 H131 T6V 19 T6V H031 H3 H 0 0 N N N N N N 8.187 -3.577 19.280 0.337 -3.440 0.651 H031 T6V 20 T6V H032 H4 H 0 0 N N N N N N 8.644 -3.326 20.999 -1.252 -4.236 0.555 H032 T6V 21 T6V H1 H5 H 0 1 N N N N N N 8.765 -4.962 20.267 -0.275 -4.019 -0.916 H1 T6V 22 T6V H071 H6 H 0 0 N N N N N N 8.613 -6.648 21.990 -2.084 0.060 2.130 H071 T6V 23 T6V H081 H7 H 0 0 N N N N N N 10.362 -6.796 23.715 -3.240 2.222 1.916 H081 T6V 24 T6V H091 H8 H 0 0 N N N N N N 10.337 -5.281 25.645 -3.091 3.498 -0.183 H091 T6V 25 T6V H111 H9 H 0 0 N N N N N N 6.830 -3.394 24.123 -0.645 0.444 -1.878 H111 T6V 26 T6V H121 H10 H 0 0 N N N N N N 4.483 -4.905 21.690 0.669 -1.870 1.721 H121 T6V 27 T6V H141 H11 H 0 0 N N N N N N 3.562 -8.307 22.168 3.237 -0.985 -1.436 H141 T6V 28 T6V H182 H12 H 0 0 N N N N N N 4.350 -4.386 23.961 0.207 0.857 1.558 H182 T6V 29 T6V H181 H13 H 0 0 N N N N N N 5.811 -5.343 24.381 1.697 0.173 2.297 H181 T6V 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T6V O01 C02 DOUB N N 1 T6V C02 C03 SING N N 2 T6V C02 N05 SING N N 3 T6V C06 C07 DOUB Y N 4 T6V C07 C08 SING Y N 5 T6V C08 C09 DOUB Y N 6 T6V C09 C10 SING Y N 7 T6V C10 C11 DOUB Y N 8 T6V N05 C06 SING N N 9 T6V N05 C12 SING N N 10 T6V C12 C13 SING N N 11 T6V C13 C14 DOUB N N 12 T6V C14 S15 SING N N 13 T6V S15 O16 DOUB N N 14 T6V S15 O17 DOUB N N 15 T6V S15 C18 SING N N 16 T6V C06 C11 SING Y N 17 T6V C12 C18 SING N N 18 T6V C10 H101 SING N N 19 T6V C13 H131 SING N N 20 T6V C03 H031 SING N N 21 T6V C03 H032 SING N N 22 T6V C03 H1 SING N N 23 T6V C07 H071 SING N N 24 T6V C08 H081 SING N N 25 T6V C09 H091 SING N N 26 T6V C11 H111 SING N N 27 T6V C12 H121 SING N N 28 T6V C14 H141 SING N N 29 T6V C18 H182 SING N N 30 T6V C18 H181 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T6V SMILES ACDLabs 12.01 "c1cc(ccc1)N(C(C)=O)C2C=CS(C2)(=O)=O" T6V InChI InChI 1.03 "InChI=1S/C12H13NO3S/c1-10(14)13(11-5-3-2-4-6-11)12-7-8-17(15,16)9-12/h2-8,12H,9H2,1H3/t12-/m0/s1" T6V InChIKey InChI 1.03 KBIYZUQDVPCCPL-LBPRGKRZSA-N T6V SMILES_CANONICAL CACTVS 3.385 "CC(=O)N([C@@H]1C[S](=O)(=O)C=C1)c2ccccc2" T6V SMILES CACTVS 3.385 "CC(=O)N([CH]1C[S](=O)(=O)C=C1)c2ccccc2" T6V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N(c1ccccc1)[C@@H]2CS(=O)(=O)C=C2" T6V SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)N(c1ccccc1)C2CS(=O)(=O)C=C2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier T6V "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(3S)-1,1-dioxo-2,3-dihydro-1H-1lambda~6~-thiophen-3-yl]-N-phenylacetamide" T6V "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(3~{S})-1,1-bis(oxidanylidene)-2,3-dihydrothiophen-3-yl]-~{N}-phenyl-ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T6V "Create component" 2020-03-16 RCSB T6V "Initial release" 2020-03-25 RCSB T6V "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id T6V _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C03 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #