data_T6X # _chem_comp.id T6X _chem_comp.name "(2R)-2-[[6-(5-naphthalen-1-ylpentylamino)-9-propan-2-yl-purin-2-yl]amino]butan-1-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H36 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-21 _chem_comp.pdbx_modified_date 2023-09-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 460.614 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T6X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BUM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T6X C1 C1 C 0 1 N N N -111.073 55.610 -47.658 -0.055 -0.049 -0.373 C1 T6X 1 T6X C10 C2 C 0 1 N N R -115.805 58.021 -49.385 -3.358 -3.304 -0.007 C10 T6X 2 T6X C11 C3 C 0 1 N N N -116.976 57.148 -49.833 -2.780 -3.536 1.391 C11 T6X 3 T6X C12 C4 C 0 1 N N N -116.069 59.523 -49.507 -3.956 -4.610 -0.534 C12 T6X 4 T6X C13 C5 C 0 1 N N N -117.027 60.082 -48.501 -4.422 -4.411 -1.978 C13 T6X 5 T6X C14 C6 C 0 1 N N N -109.997 55.786 -46.605 1.329 0.589 -0.504 C14 T6X 6 T6X C15 C7 C 0 1 N N N -110.517 56.110 -45.234 2.392 -0.509 -0.571 C15 T6X 7 T6X C16 C8 C 0 1 N N N -109.482 56.101 -44.122 3.777 0.129 -0.703 C16 T6X 8 T6X C17 C9 C 0 1 N N N -108.305 57.032 -44.394 4.840 -0.970 -0.770 C17 T6X 9 T6X C18 C10 C 0 1 Y N N -108.132 58.188 -43.439 6.204 -0.342 -0.899 C18 T6X 10 T6X C19 C11 C 0 1 Y N N -107.492 58.044 -42.245 6.766 -0.175 -2.127 C19 T6X 11 T6X C2 C12 C 0 1 Y N N -113.401 54.940 -47.214 -2.410 0.666 -0.188 C2 T6X 12 T6X C20 C13 C 0 1 Y N N -107.335 59.119 -41.351 8.026 0.404 -2.266 C20 T6X 13 T6X C21 C14 C 0 1 Y N N -107.823 60.343 -41.664 8.731 0.819 -1.179 C21 T6X 14 T6X C22 C15 C 0 1 Y N N -108.497 60.561 -42.886 8.182 0.664 0.106 C22 T6X 15 T6X C23 C16 C 0 1 Y N N -108.656 59.473 -43.789 6.899 0.080 0.247 C23 T6X 16 T6X C24 C17 C 0 1 Y N N -109.014 61.833 -43.226 8.880 1.080 1.253 C24 T6X 17 T6X C25 C18 C 0 1 Y N N -109.660 62.029 -44.401 8.317 0.914 2.481 C25 T6X 18 T6X C26 C19 C 0 1 Y N N -109.823 60.969 -45.300 7.057 0.335 2.620 C26 T6X 19 T6X C27 C20 C 0 1 Y N N -109.337 59.731 -45.004 6.348 -0.071 1.531 C27 T6X 20 T6X C3 C21 C 0 1 Y N N -115.136 56.463 -47.595 -4.064 -0.939 -0.001 C3 T6X 21 T6X C4 C22 C 0 1 Y N N -115.680 54.396 -46.908 -4.740 1.264 -0.001 C4 T6X 22 T6X C5 C23 C 0 1 Y N N -114.364 53.978 -46.850 -3.399 1.663 -0.124 C5 T6X 23 T6X C6 C24 C 0 1 Y N N -115.542 52.314 -46.253 -4.605 3.464 -0.060 C6 T6X 24 T6X C7 C25 C 0 1 N N N -117.887 53.171 -46.414 -6.934 2.515 0.160 C7 T6X 25 T6X C8 C26 C 0 1 N N N -118.560 53.012 -47.775 -7.289 3.294 1.427 C8 T6X 26 T6X C9 C27 C 0 1 N N N -118.487 54.294 -45.603 -7.502 3.241 -1.061 C9 T6X 27 T6X N1 N1 N 0 1 N N N -112.081 54.665 -47.221 -1.073 1.003 -0.308 N1 T6X 28 T6X N2 N2 N 0 1 Y N N -113.820 56.166 -47.589 -2.785 -0.606 -0.123 N2 T6X 29 T6X N3 N3 N 0 1 Y N N -116.126 55.605 -47.278 -5.026 -0.033 0.061 N3 T6X 30 T6X N4 N4 N 0 1 Y N N -114.285 52.656 -46.428 -3.387 3.018 -0.154 N4 T6X 31 T6X N5 N5 N 0 1 Y N N -116.436 53.310 -46.531 -5.477 2.420 0.037 N5 T6X 32 T6X N6 N6 N 0 1 N N N -115.479 57.699 -47.993 -4.403 -2.280 0.061 N6 T6X 33 T6X O1 O1 O 0 1 N N N -117.180 57.222 -51.242 -3.790 -4.084 2.240 O1 T6X 34 T6X H2 H1 H 0 1 N N N -110.611 55.240 -48.585 -0.245 -0.686 -1.236 H2 T6X 35 T6X H1 H2 H 0 1 N N N -111.551 56.582 -47.849 -0.094 -0.648 0.537 H1 T6X 36 T6X H13 H3 H 0 1 N N N -114.938 57.777 -50.017 -2.566 -2.971 -0.677 H13 T6X 37 T6X H15 H4 H 0 1 N N N -117.889 57.487 -49.322 -1.943 -4.232 1.327 H15 T6X 38 T6X H14 H5 H 0 1 N N N -116.768 56.104 -49.557 -2.434 -2.588 1.803 H14 T6X 39 T6X H18 H6 H 0 1 N N N -115.109 60.048 -49.393 -3.201 -5.395 -0.501 H18 T6X 40 T6X H17 H7 H 0 1 N N N -116.476 59.717 -50.510 -4.806 -4.897 0.086 H17 T6X 41 T6X H21 H8 H 0 1 N N N -117.149 61.162 -48.671 -5.177 -3.626 -2.011 H21 T6X 42 T6X H20 H9 H 0 1 N N N -118.001 59.582 -48.605 -3.572 -4.124 -2.597 H20 T6X 43 T6X H19 H10 H 0 1 N N N -116.634 59.913 -47.487 -4.848 -5.341 -2.353 H19 T6X 44 T6X H23 H11 H 0 1 N N N -109.421 54.851 -46.542 1.368 1.189 -1.414 H23 T6X 45 T6X H22 H12 H 0 1 N N N -109.334 56.604 -46.924 1.519 1.227 0.360 H22 T6X 46 T6X H24 H13 H 0 1 N N N -110.966 57.113 -45.271 2.353 -1.109 0.338 H24 T6X 47 T6X H25 H14 H 0 1 N N N -111.291 55.371 -44.982 2.202 -1.146 -1.435 H25 T6X 48 T6X H26 H15 H 0 1 N N N -109.969 56.416 -43.187 3.816 0.728 -1.612 H26 T6X 49 T6X H27 H16 H 0 1 N N N -109.099 55.076 -44.008 3.967 0.766 0.161 H27 T6X 50 T6X H28 H17 H 0 1 N N N -107.386 56.429 -44.360 4.801 -1.569 0.140 H28 T6X 51 T6X H29 H18 H 0 1 N N N -108.433 57.448 -45.404 4.650 -1.607 -1.633 H29 T6X 52 T6X H30 H19 H 0 1 N N N -107.094 57.077 -41.977 6.228 -0.496 -3.007 H30 T6X 53 T6X H31 H20 H 0 1 N N N -106.824 58.968 -40.412 8.450 0.525 -3.253 H31 T6X 54 T6X H32 H21 H 0 1 N N N -107.695 61.162 -40.971 9.707 1.266 -1.302 H32 T6X 55 T6X H33 H22 H 0 1 N N N -108.892 62.659 -42.540 9.858 1.530 1.160 H33 T6X 56 T6X H34 H23 H 0 1 N N N -110.050 63.006 -44.644 8.856 1.235 3.360 H34 T6X 57 T6X H35 H24 H 0 1 N N N -110.338 61.133 -46.235 6.632 0.218 3.606 H35 T6X 58 T6X H36 H25 H 0 1 N N N -109.474 58.927 -45.712 5.372 -0.517 1.655 H36 T6X 59 T6X H4 H26 H 0 1 N N N -115.842 51.332 -45.919 -4.885 4.508 -0.057 H4 T6X 60 T6X H5 H27 H 0 1 N N N -118.082 52.242 -45.859 -7.360 1.513 0.217 H5 T6X 61 T6X H7 H28 H 0 1 N N N -119.647 52.911 -47.638 -8.373 3.365 1.518 H7 T6X 62 T6X H6 H29 H 0 1 N N N -118.349 53.897 -48.394 -6.885 2.777 2.297 H6 T6X 63 T6X H8 H30 H 0 1 N N N -118.169 52.113 -48.275 -6.863 4.296 1.370 H8 T6X 64 T6X H11 H31 H 0 1 N N N -117.969 54.366 -44.636 -7.249 2.686 -1.965 H11 T6X 65 T6X H10 H32 H 0 1 N N N -118.375 55.242 -46.150 -8.586 3.312 -0.970 H10 T6X 66 T6X H9 H33 H 0 1 N N N -119.555 54.093 -45.433 -7.076 4.243 -1.119 H9 T6X 67 T6X H3 H34 H 0 1 N N N -111.972 53.859 -47.803 -0.810 1.936 -0.351 H3 T6X 68 T6X H12 H35 H 0 1 N N N -114.714 58.292 -47.744 -5.333 -2.542 0.150 H12 T6X 69 T6X H16 H36 H 0 1 N N N -117.913 56.669 -51.486 -3.493 -4.256 3.144 H16 T6X 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T6X O1 C11 SING N N 1 T6X C11 C10 SING N N 2 T6X C12 C10 SING N N 3 T6X C12 C13 SING N N 4 T6X C10 N6 SING N N 5 T6X N6 C3 SING N N 6 T6X C8 C7 SING N N 7 T6X C1 N1 SING N N 8 T6X C1 C14 SING N N 9 T6X C3 N2 SING Y N 10 T6X C3 N3 DOUB Y N 11 T6X N2 C2 DOUB Y N 12 T6X N3 C4 SING Y N 13 T6X N1 C2 SING N N 14 T6X C2 C5 SING Y N 15 T6X C4 C5 DOUB Y N 16 T6X C4 N5 SING Y N 17 T6X C5 N4 SING Y N 18 T6X C14 C15 SING N N 19 T6X N5 C7 SING N N 20 T6X N5 C6 SING Y N 21 T6X N4 C6 DOUB Y N 22 T6X C7 C9 SING N N 23 T6X C26 C27 DOUB Y N 24 T6X C26 C25 SING Y N 25 T6X C15 C16 SING N N 26 T6X C27 C23 SING Y N 27 T6X C25 C24 DOUB Y N 28 T6X C17 C16 SING N N 29 T6X C17 C18 SING N N 30 T6X C23 C18 SING Y N 31 T6X C23 C22 DOUB Y N 32 T6X C18 C19 DOUB Y N 33 T6X C24 C22 SING Y N 34 T6X C22 C21 SING Y N 35 T6X C19 C20 SING Y N 36 T6X C21 C20 DOUB Y N 37 T6X C1 H2 SING N N 38 T6X C1 H1 SING N N 39 T6X C10 H13 SING N N 40 T6X C11 H15 SING N N 41 T6X C11 H14 SING N N 42 T6X C12 H18 SING N N 43 T6X C12 H17 SING N N 44 T6X C13 H21 SING N N 45 T6X C13 H20 SING N N 46 T6X C13 H19 SING N N 47 T6X C14 H23 SING N N 48 T6X C14 H22 SING N N 49 T6X C15 H24 SING N N 50 T6X C15 H25 SING N N 51 T6X C16 H26 SING N N 52 T6X C16 H27 SING N N 53 T6X C17 H28 SING N N 54 T6X C17 H29 SING N N 55 T6X C19 H30 SING N N 56 T6X C20 H31 SING N N 57 T6X C21 H32 SING N N 58 T6X C24 H33 SING N N 59 T6X C25 H34 SING N N 60 T6X C26 H35 SING N N 61 T6X C27 H36 SING N N 62 T6X C6 H4 SING N N 63 T6X C7 H5 SING N N 64 T6X C8 H7 SING N N 65 T6X C8 H6 SING N N 66 T6X C8 H8 SING N N 67 T6X C9 H11 SING N N 68 T6X C9 H10 SING N N 69 T6X C9 H9 SING N N 70 T6X N1 H3 SING N N 71 T6X N6 H12 SING N N 72 T6X O1 H16 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T6X InChI InChI 1.06 "InChI=1S/C27H36N6O/c1-4-22(17-34)30-27-31-25(24-26(32-27)33(18-29-24)19(2)3)28-16-9-5-6-11-20-13-10-14-21-12-7-8-15-23(20)21/h7-8,10,12-15,18-19,22,34H,4-6,9,11,16-17H2,1-3H3,(H2,28,30,31,32)/t22-/m1/s1" T6X InChIKey InChI 1.06 VMZLWLKLMRYJFQ-JOCHJYFZSA-N T6X SMILES_CANONICAL CACTVS 3.385 "CC[C@H](CO)Nc1nc(NCCCCCc2cccc3ccccc23)c4ncn(C(C)C)c4n1" T6X SMILES CACTVS 3.385 "CC[CH](CO)Nc1nc(NCCCCCc2cccc3ccccc23)c4ncn(C(C)C)c4n1" T6X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](CO)Nc1nc(c2c(n1)n(cn2)C(C)C)NCCCCCc3cccc4c3cccc4" T6X SMILES "OpenEye OEToolkits" 2.0.7 "CCC(CO)Nc1nc(c2c(n1)n(cn2)C(C)C)NCCCCCc3cccc4c3cccc4" # _pdbx_chem_comp_identifier.comp_id T6X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-2-[[6-(5-naphthalen-1-ylpentylamino)-9-propan-2-yl-purin-2-yl]amino]butan-1-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T6X "Create component" 2022-12-21 PDBE T6X "Initial release" 2023-09-20 RCSB #