data_T8Q # _chem_comp.id T8Q _chem_comp.name "N-{3-[1-(tert-butoxycarbonyl)piperidin-4-yl]propyl}adenosine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H36 N6 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-07-20 _chem_comp.pdbx_modified_date 2023-01-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 492.569 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T8Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8CY5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T8Q N1 N1 N 0 1 Y N N -30.973 0.860 12.366 -3.284 -1.053 0.564 N1 T8Q 1 T8Q C7 C1 C 0 1 Y N N -31.597 1.957 14.267 -4.242 0.927 0.256 C7 T8Q 2 T8Q C8 C2 C 0 1 Y N N -30.672 3.768 15.122 -3.128 2.934 0.139 C8 T8Q 3 T8Q N2 N2 N 0 1 Y N N -31.638 2.855 15.254 -4.251 2.248 0.110 N2 T8Q 4 T8Q C9 C3 C 0 1 Y N N -29.708 2.941 13.200 -1.843 1.045 0.468 C9 T8Q 5 T8Q O1 O1 O 0 1 N N N -35.604 1.142 14.026 -7.156 1.536 -1.826 O1 T8Q 6 T8Q C1 C4 C 0 1 N N R -34.782 0.009 14.278 -7.024 0.186 -1.379 C1 T8Q 7 T8Q O5 O2 O 0 1 N N N -30.318 -1.487 3.979 8.054 -1.643 -1.161 O5 T8Q 8 T8Q C5 C5 C 0 1 Y N N -32.007 0.278 12.925 -4.568 -1.244 0.465 C5 T8Q 9 T8Q C6 C6 C 0 1 Y N N -30.698 1.924 13.212 -3.015 0.269 0.444 C6 T8Q 10 T8Q N3 N3 N 0 1 Y N N -29.730 3.863 14.179 -1.951 2.360 0.313 N3 T8Q 11 T8Q C4 C7 C 0 1 N N R -33.493 0.431 14.975 -6.646 0.146 0.118 C4 T8Q 12 T8Q O4 O3 O 0 1 N N N -32.359 -1.164 4.923 9.070 -0.051 0.004 O4 T8Q 13 T8Q C3 C8 C 0 1 N N N -33.868 -2.984 15.543 -9.345 -2.306 0.088 C3 T8Q 14 T8Q O3 O4 O 0 1 N N N -33.039 -0.717 15.665 -7.369 -0.985 0.652 O3 T8Q 15 T8Q C2 C9 C 0 1 N N R -34.166 -1.566 15.980 -8.669 -0.934 0.025 C2 T8Q 16 T8Q N4 N4 N 0 1 N N N -28.698 3.000 12.308 -0.605 0.453 0.650 N4 T8Q 17 T8Q N N5 N 0 1 Y N N -32.429 0.879 14.080 -5.202 -0.052 0.275 N T8Q 18 T8Q C C10 C 0 1 N N S -35.394 -0.916 15.335 -8.386 -0.541 -1.441 C T8Q 19 T8Q O O5 O 0 1 N N N -36.131 -0.183 16.306 -9.401 0.339 -1.929 O T8Q 20 T8Q C10 C11 C 0 1 N N N -28.443 2.036 11.250 0.605 1.278 0.672 C10 T8Q 21 T8Q C11 C12 C 0 1 N N N -29.196 2.383 9.985 1.828 0.383 0.886 C11 T8Q 22 T8Q C12 C13 C 0 1 N N N -29.097 1.268 8.952 3.092 1.245 0.909 C12 T8Q 23 T8Q C13 C14 C 0 1 N N N -29.287 1.725 7.506 4.315 0.350 1.123 C13 T8Q 24 T8Q C14 C15 C 0 1 N N N -30.758 1.918 7.152 5.564 1.222 1.271 C14 T8Q 25 T8Q C15 C16 C 0 1 N N N -31.380 0.656 6.563 6.781 0.324 1.520 C15 T8Q 26 T8Q C16 C17 C 0 1 N N N -31.082 -0.854 4.666 7.998 -0.818 -0.271 C16 T8Q 27 T8Q C17 C18 C 0 1 N N N -32.976 -2.410 4.400 10.258 -0.265 -0.803 C17 T8Q 28 T8Q C18 C19 C 0 1 N N N -33.007 -2.327 2.887 10.734 -1.710 -0.637 C18 T8Q 29 T8Q C19 C20 C 0 1 N N N -32.209 -3.629 4.870 9.930 -0.001 -2.274 C19 T8Q 30 T8Q C20 C21 C 0 1 N N N -34.373 -2.398 4.979 11.363 0.691 -0.348 C20 T8Q 31 T8Q C21 C22 C 0 1 N N N -29.368 0.805 5.178 5.686 -1.499 0.153 C21 T8Q 32 T8Q C22 C23 C 0 1 N N N -28.649 0.756 6.520 4.481 -0.581 -0.080 C22 T8Q 33 T8Q N5 N6 N 0 1 N N N -30.735 0.285 5.298 6.864 -0.669 0.441 N5 T8Q 34 T8Q O2 O6 O 0 1 N N N -34.295 -3.930 16.517 -9.637 -2.631 1.449 O2 T8Q 35 T8Q H1 H1 H 0 1 N N N -30.649 4.535 15.882 -3.171 4.006 0.016 H1 T8Q 36 T8Q H2 H2 H 0 1 N N N -36.402 0.864 13.592 -7.393 1.620 -2.760 H2 T8Q 37 T8Q H3 H3 H 0 1 N N N -34.558 -0.553 13.359 -6.279 -0.342 -1.975 H3 T8Q 38 T8Q H4 H4 H 0 1 N N N -32.483 -0.598 12.510 -5.058 -2.204 0.525 H4 T8Q 39 T8Q H5 H5 H 0 1 N N N -33.729 1.232 15.691 -6.959 1.065 0.613 H5 T8Q 40 T8Q H6 H6 H 0 1 N N N -34.392 -3.184 14.597 -10.271 -2.281 -0.486 H6 T8Q 41 T8Q H7 H7 H 0 1 N N N -32.784 -3.091 15.392 -8.677 -3.059 -0.330 H7 T8Q 42 T8Q H8 H8 H 0 1 N N N -34.318 -1.569 17.069 -9.294 -0.182 0.507 H8 T8Q 43 T8Q H9 H9 H 0 1 N N N -27.862 3.016 12.857 -0.539 -0.508 0.762 H9 T8Q 44 T8Q H10 H10 H 0 1 N N N -36.015 -1.683 14.849 -8.316 -1.430 -2.068 H10 T8Q 45 T8Q H11 H11 H 0 1 N N N -36.497 -0.783 16.946 -10.277 -0.066 -1.989 H11 T8Q 46 T8Q H12 H12 H 0 1 N N N -28.760 1.039 11.592 0.703 1.806 -0.276 H12 T8Q 47 T8Q H13 H13 H 0 1 N N N -27.365 2.023 11.031 0.537 2.000 1.485 H13 T8Q 48 T8Q H14 H14 H 0 1 N N N -28.772 3.304 9.558 1.731 -0.145 1.834 H14 T8Q 49 T8Q H15 H15 H 0 1 N N N -30.255 2.547 10.233 1.896 -0.340 0.073 H15 T8Q 50 T8Q H16 H16 H 0 1 N N N -29.870 0.519 9.180 3.190 1.773 -0.039 H16 T8Q 51 T8Q H17 H17 H 0 1 N N N -28.102 0.807 9.039 3.024 1.967 1.722 H17 T8Q 52 T8Q H18 H18 H 0 1 N N N -28.785 2.697 7.394 4.177 -0.244 2.026 H18 T8Q 53 T8Q H19 H19 H 0 1 N N N -30.841 2.731 6.415 5.717 1.798 0.359 H19 T8Q 54 T8Q H20 H20 H 0 1 N N N -31.309 2.192 8.064 5.435 1.902 2.114 H20 T8Q 55 T8Q H21 H21 H 0 1 N N N -32.450 0.835 6.381 7.687 0.931 1.528 H21 T8Q 56 T8Q H22 H22 H 0 1 N N N -31.263 -0.170 7.280 6.672 -0.182 2.479 H22 T8Q 57 T8Q H23 H23 H 0 1 N N N -33.570 -1.433 2.580 11.625 -1.871 -1.243 H23 T8Q 58 T8Q H24 H24 H 0 1 N N N -31.978 -2.263 2.502 10.967 -1.898 0.411 H24 T8Q 59 T8Q H25 H25 H 0 1 N N N -33.495 -3.225 2.481 9.947 -2.391 -0.962 H25 T8Q 60 T8Q H26 H26 H 0 1 N N N -32.206 -3.659 5.970 9.592 1.028 -2.392 H26 T8Q 61 T8Q H27 H27 H 0 1 N N N -32.690 -4.538 4.480 10.822 -0.162 -2.880 H27 T8Q 62 T8Q H28 H28 H 0 1 N N N -31.174 -3.575 4.502 9.143 -0.682 -2.598 H28 T8Q 63 T8Q H29 H29 H 0 1 N N N -34.316 -2.459 6.076 11.025 1.720 -0.466 H29 T8Q 64 T8Q H30 H30 H 0 1 N N N -34.882 -1.467 4.690 11.597 0.503 0.700 H30 T8Q 65 T8Q H31 H31 H 0 1 N N N -34.937 -3.259 4.592 12.255 0.530 -0.953 H31 T8Q 66 T8Q H32 H32 H 0 1 N N N -28.813 0.195 4.450 5.486 -2.156 0.999 H32 T8Q 67 T8Q H33 H33 H 0 1 N N N -29.408 1.847 4.829 5.869 -2.096 -0.741 H33 T8Q 68 T8Q H34 H34 H 0 1 N N N -28.710 -0.265 6.926 3.582 -1.185 -0.199 H34 T8Q 69 T8Q H35 H35 H 0 1 N N N -27.594 1.031 6.375 4.644 0.012 -0.980 H35 T8Q 70 T8Q H36 H36 H 0 1 N N N -34.095 -4.808 16.215 -10.067 -3.489 1.565 H36 T8Q 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T8Q C18 C17 SING N N 1 T8Q O5 C16 DOUB N N 2 T8Q C17 C19 SING N N 3 T8Q C17 O4 SING N N 4 T8Q C17 C20 SING N N 5 T8Q C16 O4 SING N N 6 T8Q C16 N5 SING N N 7 T8Q C21 N5 SING N N 8 T8Q C21 C22 SING N N 9 T8Q N5 C15 SING N N 10 T8Q C22 C13 SING N N 11 T8Q C15 C14 SING N N 12 T8Q C14 C13 SING N N 13 T8Q C13 C12 SING N N 14 T8Q C12 C11 SING N N 15 T8Q C11 C10 SING N N 16 T8Q C10 N4 SING N N 17 T8Q N4 C9 SING N N 18 T8Q N1 C5 DOUB Y N 19 T8Q N1 C6 SING Y N 20 T8Q C5 N SING Y N 21 T8Q C9 C6 SING Y N 22 T8Q C9 N3 DOUB Y N 23 T8Q C6 C7 DOUB Y N 24 T8Q O1 C1 SING N N 25 T8Q N C7 SING Y N 26 T8Q N C4 SING N N 27 T8Q N3 C8 SING Y N 28 T8Q C7 N2 SING Y N 29 T8Q C1 C4 SING N N 30 T8Q C1 C SING N N 31 T8Q C4 O3 SING N N 32 T8Q C8 N2 DOUB Y N 33 T8Q C C2 SING N N 34 T8Q C O SING N N 35 T8Q C3 C2 SING N N 36 T8Q C3 O2 SING N N 37 T8Q O3 C2 SING N N 38 T8Q C8 H1 SING N N 39 T8Q O1 H2 SING N N 40 T8Q C1 H3 SING N N 41 T8Q C5 H4 SING N N 42 T8Q C4 H5 SING N N 43 T8Q C3 H6 SING N N 44 T8Q C3 H7 SING N N 45 T8Q C2 H8 SING N N 46 T8Q N4 H9 SING N N 47 T8Q C H10 SING N N 48 T8Q O H11 SING N N 49 T8Q C10 H12 SING N N 50 T8Q C10 H13 SING N N 51 T8Q C11 H14 SING N N 52 T8Q C11 H15 SING N N 53 T8Q C12 H16 SING N N 54 T8Q C12 H17 SING N N 55 T8Q C13 H18 SING N N 56 T8Q C14 H19 SING N N 57 T8Q C14 H20 SING N N 58 T8Q C15 H21 SING N N 59 T8Q C15 H22 SING N N 60 T8Q C18 H23 SING N N 61 T8Q C18 H24 SING N N 62 T8Q C18 H25 SING N N 63 T8Q C19 H26 SING N N 64 T8Q C19 H27 SING N N 65 T8Q C19 H28 SING N N 66 T8Q C20 H29 SING N N 67 T8Q C20 H30 SING N N 68 T8Q C20 H31 SING N N 69 T8Q C21 H32 SING N N 70 T8Q C21 H33 SING N N 71 T8Q C22 H34 SING N N 72 T8Q C22 H35 SING N N 73 T8Q O2 H36 SING N N 74 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T8Q SMILES ACDLabs 12.01 "CC(C)(C)OC(=O)N1CCC(CC1)CCCNc1ncnc2c1ncn2C1OC(CO)C(O)C1O" T8Q InChI InChI 1.06 "InChI=1S/C23H36N6O6/c1-23(2,3)35-22(33)28-9-6-14(7-10-28)5-4-8-24-19-16-20(26-12-25-19)29(13-27-16)21-18(32)17(31)15(11-30)34-21/h12-15,17-18,21,30-32H,4-11H2,1-3H3,(H,24,25,26)/t15-,17-,18-,21-/m1/s1" T8Q InChIKey InChI 1.06 NYCVBKCHESHFLR-QTQZEZTPSA-N T8Q SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)OC(=O)N1CCC(CCCNc2ncnc3n(cnc23)[C@@H]4O[C@H](CO)[C@@H](O)[C@H]4O)CC1" T8Q SMILES CACTVS 3.385 "CC(C)(C)OC(=O)N1CCC(CCCNc2ncnc3n(cnc23)[CH]4O[CH](CO)[CH](O)[CH]4O)CC1" T8Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)OC(=O)N1CCC(CC1)CCCNc2c3c(ncn2)n(cn3)[C@H]4[C@@H]([C@@H]([C@H](O4)CO)O)O" T8Q SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C)OC(=O)N1CCC(CC1)CCCNc2c3c(ncn2)n(cn3)C4C(C(C(O4)CO)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier T8Q "SYSTEMATIC NAME" ACDLabs 12.01 "N-{3-[1-(tert-butoxycarbonyl)piperidin-4-yl]propyl}adenosine" T8Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{tert}-butyl 4-[3-[[9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-6-yl]amino]propyl]piperidine-1-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T8Q "Create component" 2022-07-20 RCSB T8Q "Initial release" 2023-01-11 RCSB #