data_T8Z # _chem_comp.id T8Z _chem_comp.name "2-(1-methyl-1H-1,2,3-triazol-5-yl)-5-((2-(pyridin-4-yl)pyrrolidin-1-yl)methyl)-1H-benzo[d]imidazole" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H21 N7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-(3-methyl-1,2,3-triazol-4-yl)-6-[[(2~{S})-2-pyridin-4-ylpyrrolidin-1-yl]methyl]-1~{H}-benzimidazole" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-12-18 _chem_comp.pdbx_modified_date 2021-10-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 359.428 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T8Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BC2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T8Z C10 C1 C 0 1 Y N N -40.112 41.360 -3.989 -0.200 -0.245 -0.064 C10 T8Z 1 T8Z C11 C2 C 0 1 Y N N -41.326 40.731 -3.585 0.763 0.541 0.533 C11 T8Z 2 T8Z C12 C3 C 0 1 N N N -42.654 41.509 -3.604 2.222 0.232 0.314 C12 T8Z 3 T8Z N13 N1 N 0 1 N N N -43.261 41.526 -4.672 2.706 0.962 -0.865 N13 T8Z 4 T8Z C14 C4 C 0 1 N N N -43.161 42.554 -5.388 2.908 2.394 -0.556 C14 T8Z 5 T8Z C15 C5 C 0 1 N N N -44.061 42.200 -6.623 4.119 2.818 -1.423 C15 T8Z 6 T8Z C16 C6 C 0 1 N N N -44.167 40.725 -6.646 5.011 1.550 -1.357 C16 T8Z 7 T8Z C17 C7 C 0 1 N N S -43.420 40.260 -5.646 3.981 0.401 -1.347 C17 T8Z 8 T8Z C18 C8 C 0 1 Y N N -42.251 39.531 -6.397 4.443 -0.693 -0.419 C18 T8Z 9 T8Z C19 C9 C 0 1 Y N N -41.155 40.200 -6.888 4.552 -2.002 -0.864 C19 T8Z 10 T8Z C20 C10 C 0 1 Y N N -40.137 39.490 -7.537 4.980 -2.978 0.015 C20 T8Z 11 T8Z N21 N2 N 0 1 Y N N -40.216 38.163 -7.695 5.281 -2.677 1.263 N21 T8Z 12 T8Z C22 C11 C 0 1 Y N N -41.242 37.478 -7.253 5.189 -1.444 1.721 C22 T8Z 13 T8Z C23 C12 C 0 1 Y N N -42.289 38.126 -6.591 4.775 -0.414 0.898 C23 T8Z 14 T8Z C24 C13 C 0 1 Y N N -41.312 39.388 -3.153 0.399 1.615 1.333 C24 T8Z 15 T8Z C25 C14 C 0 1 Y N N -40.112 38.649 -3.142 -0.928 1.911 1.543 C25 T8Z 16 T8Z C01 C15 C 0 1 N N N -34.887 41.815 -5.581 -4.988 -2.251 -1.277 C01 T8Z 17 T8Z C05 C16 C 0 1 Y N N -34.726 38.612 -3.878 -6.244 0.674 0.424 C05 T8Z 18 T8Z C06 C17 C 0 1 Y N N -35.440 39.704 -4.314 -5.183 -0.086 0.009 C06 T8Z 19 T8Z C07 C18 C 0 1 Y N N -36.832 39.842 -4.115 -3.752 0.188 0.228 C07 T8Z 20 T8Z C09 C19 C 0 1 Y N N -38.878 40.605 -3.974 -1.544 0.038 0.135 C09 T8Z 21 T8Z C26 C20 C 0 1 Y N N -38.879 39.292 -3.567 -1.919 1.125 0.946 C26 T8Z 22 T8Z N02 N3 N 0 1 Y N N -34.592 40.515 -4.940 -5.730 -1.155 -0.649 N02 T8Z 23 T8Z N03 N4 N 0 1 Y N N -33.349 39.946 -4.880 -7.010 -1.026 -0.621 N03 T8Z 24 T8Z N04 N5 N 0 1 Y N N -33.449 38.768 -4.225 -7.344 0.042 0.011 N04 T8Z 25 T8Z N08 N6 N 0 1 Y N N -37.583 40.925 -4.301 -2.720 -0.538 -0.307 N08 T8Z 26 T8Z N27 N7 N 0 1 Y N N -37.594 38.843 -3.661 -3.273 1.164 0.963 N27 T8Z 27 T8Z H1 H1 H 0 1 N N N -40.114 42.393 -4.304 0.091 -1.076 -0.690 H1 T8Z 28 T8Z H2 H2 H 0 1 N N N -42.436 42.551 -3.326 2.793 0.538 1.191 H2 T8Z 29 T8Z H3 H3 H 0 1 N N N -43.316 41.059 -2.850 2.346 -0.839 0.155 H3 T8Z 30 T8Z H5 H5 H 0 1 N N N -42.118 42.726 -5.693 2.024 2.970 -0.831 H5 T8Z 31 T8Z H6 H6 H 0 1 N N N -43.540 43.443 -4.862 3.131 2.526 0.502 H6 T8Z 32 T8Z H7 H7 H 0 1 N N N -43.595 42.564 -7.551 3.812 3.027 -2.448 H7 T8Z 33 T8Z H8 H8 H 0 1 N N N -45.057 42.652 -6.511 4.629 3.678 -0.987 H8 T8Z 34 T8Z H9 H9 H 0 1 N N N -45.215 40.420 -6.507 5.653 1.485 -2.236 H9 T8Z 35 T8Z H10 H10 H 0 1 N N N -43.796 40.336 -7.606 5.605 1.544 -0.443 H10 T8Z 36 T8Z H11 H11 H 0 1 N N N -43.971 39.493 -5.082 3.856 0.007 -2.355 H11 T8Z 37 T8Z H12 H12 H 0 1 N N N -41.079 41.271 -6.773 4.306 -2.255 -1.885 H12 T8Z 38 T8Z H13 H13 H 0 1 N N N -39.276 40.021 -7.915 5.067 -4.000 -0.323 H13 T8Z 39 T8Z H14 H14 H 0 1 N N N -41.279 36.409 -7.401 5.445 -1.236 2.749 H14 T8Z 40 T8Z H15 H15 H 0 1 N N N -43.130 37.555 -6.226 4.702 0.594 1.278 H15 T8Z 41 T8Z H16 H16 H 0 1 N N N -42.230 38.922 -2.827 1.163 2.222 1.795 H16 T8Z 42 T8Z H17 H17 H 0 1 N N N -40.108 37.618 -2.822 -1.204 2.748 2.168 H17 T8Z 43 T8Z H18 H18 H 0 1 N N N -33.960 42.240 -5.993 -4.672 -1.951 -2.276 H18 T8Z 44 T8Z H19 H19 H 0 1 N N N -35.615 41.667 -6.392 -4.111 -2.487 -0.674 H19 T8Z 45 T8Z H20 H20 H 0 1 N N N -35.306 42.505 -4.834 -5.628 -3.130 -1.346 H20 T8Z 46 T8Z H21 H21 H 0 1 N N N -35.133 37.767 -3.343 -6.199 1.600 0.978 H21 T8Z 47 T8Z H22 H22 H 0 1 N N N -37.261 41.815 -4.622 -2.799 -1.311 -0.886 H22 T8Z 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T8Z N21 C20 DOUB Y N 1 T8Z N21 C22 SING Y N 2 T8Z C20 C19 SING Y N 3 T8Z C22 C23 DOUB Y N 4 T8Z C19 C18 DOUB Y N 5 T8Z C16 C15 SING N N 6 T8Z C16 C17 SING N N 7 T8Z C15 C14 SING N N 8 T8Z C23 C18 SING Y N 9 T8Z C18 C17 SING N N 10 T8Z C17 N13 SING N N 11 T8Z C01 N02 SING N N 12 T8Z C14 N13 SING N N 13 T8Z N02 N03 SING Y N 14 T8Z N02 C06 SING Y N 15 T8Z N03 N04 DOUB Y N 16 T8Z N13 C12 SING N N 17 T8Z C06 C07 SING N N 18 T8Z C06 C05 DOUB Y N 19 T8Z N08 C07 SING Y N 20 T8Z N08 C09 SING Y N 21 T8Z N04 C05 SING Y N 22 T8Z C07 N27 DOUB Y N 23 T8Z C10 C09 DOUB Y N 24 T8Z C10 C11 SING Y N 25 T8Z C09 C26 SING Y N 26 T8Z N27 C26 SING Y N 27 T8Z C12 C11 SING N N 28 T8Z C11 C24 DOUB Y N 29 T8Z C26 C25 DOUB Y N 30 T8Z C24 C25 SING Y N 31 T8Z C10 H1 SING N N 32 T8Z C12 H2 SING N N 33 T8Z C12 H3 SING N N 34 T8Z C14 H5 SING N N 35 T8Z C14 H6 SING N N 36 T8Z C15 H7 SING N N 37 T8Z C15 H8 SING N N 38 T8Z C16 H9 SING N N 39 T8Z C16 H10 SING N N 40 T8Z C17 H11 SING N N 41 T8Z C19 H12 SING N N 42 T8Z C20 H13 SING N N 43 T8Z C22 H14 SING N N 44 T8Z C23 H15 SING N N 45 T8Z C24 H16 SING N N 46 T8Z C25 H17 SING N N 47 T8Z C01 H18 SING N N 48 T8Z C01 H19 SING N N 49 T8Z C01 H20 SING N N 50 T8Z C05 H21 SING N N 51 T8Z N08 H22 SING N N 52 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T8Z InChI InChI 1.03 "InChI=1S/C20H21N7/c1-26-19(12-22-25-26)20-23-16-5-4-14(11-17(16)24-20)13-27-10-2-3-18(27)15-6-8-21-9-7-15/h4-9,11-12,18H,2-3,10,13H2,1H3,(H,23,24)/t18-/m0/s1" T8Z InChIKey InChI 1.03 IEEIOQSIZMWGTQ-SFHVURJKSA-N T8Z SMILES_CANONICAL CACTVS 3.385 "Cn1nncc1c2[nH]c3cc(CN4CCC[C@H]4c5ccncc5)ccc3n2" T8Z SMILES CACTVS 3.385 "Cn1nncc1c2[nH]c3cc(CN4CCC[CH]4c5ccncc5)ccc3n2" T8Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1c(cnn1)c2[nH]c3cc(ccc3n2)CN4CCC[C@H]4c5ccncc5" T8Z SMILES "OpenEye OEToolkits" 2.0.7 "Cn1c(cnn1)c2[nH]c3cc(ccc3n2)CN4CCCC4c5ccncc5" # _pdbx_chem_comp_identifier.comp_id T8Z _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-(3-methyl-1,2,3-triazol-4-yl)-6-[[(2~{S})-2-pyridin-4-ylpyrrolidin-1-yl]methyl]-1~{H}-benzimidazole" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id T8Z _pdbx_chem_comp_synonyms.name "2-(3-methyl-1,2,3-triazol-4-yl)-6-[[(2~{S})-2-pyridin-4-ylpyrrolidin-1-yl]methyl]-1~{H}-benzimidazole" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T8Z "Create component" 2020-12-18 PDBE T8Z "Initial release" 2021-10-20 RCSB ##