data_TFN # _chem_comp.id TFN _chem_comp.name "N-(benzylsulfonyl)-O-tert-butyl-D-seryl-N-(4-carbamimidoylbenzyl)glycinamide" _chem_comp.type PEPTIDE-LIKE _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H33 N5 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-11-18 _chem_comp.pdbx_modified_date 2012-01-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 503.614 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TFN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3PM3 _chem_comp.pdbx_subcomponent_list "PMS 3PM GLY 00S" _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TFN C7 C7 C 0 1 N N N 16.762 19.584 36.514 -5.417 0.023 -0.170 C PMS 1 TFN S8 S8 S 0 1 N N N 17.529 20.442 37.914 -4.560 1.118 0.996 S PMS 2 TFN C5 C5 C 0 1 Y N N 17.684 18.384 36.232 -6.765 0.605 -0.507 C1 PMS 3 TFN C4 C4 C 0 1 Y N N 17.287 17.093 36.565 -6.897 1.467 -1.580 C2 PMS 4 TFN C3 C3 C 0 1 Y N N 18.134 16.001 36.312 -8.134 2.001 -1.889 C3 PMS 5 TFN C2 C2 C 0 1 Y N N 19.391 16.207 35.736 -9.239 1.673 -1.127 C4 PMS 6 TFN C1 C1 C 0 1 Y N N 19.795 17.503 35.407 -9.107 0.811 -0.054 C5 PMS 7 TFN C6 C6 C 0 1 Y N N 18.950 18.589 35.657 -7.872 0.272 0.252 C6 PMS 8 TFN O35 O35 O 0 1 N N N 18.544 21.430 37.551 -4.205 2.340 0.363 O2S PMS 9 TFN O34 O34 O 0 1 N N N 17.311 19.870 39.229 -5.211 1.109 2.259 O1S PMS 10 TFN N9 N9 N 0 1 N N N 16.338 21.594 38.194 -3.111 0.368 1.278 N 3PM 11 TFN C10 C10 C 0 1 N N R 16.224 22.784 37.313 -2.143 0.212 0.190 CA 3PM 12 TFN C11 C11 C 0 1 N N N 15.536 23.898 38.104 -2.315 -1.167 -0.452 C11 3PM 13 TFN O12 O12 O 0 1 N N N 15.592 25.054 37.240 -1.982 -2.180 0.499 O12 3PM 14 TFN C13 C13 C 0 1 N N N 14.644 26.124 37.440 -2.110 -3.512 -0.002 C13 3PM 15 TFN C15 C15 C 0 1 N N N 14.310 26.369 38.915 -1.180 -3.697 -1.203 C15 3PM 16 TFN C16 C16 C 0 1 N N N 13.340 25.842 36.682 -1.730 -4.508 1.095 C16 3PM 17 TFN C14 C14 C 0 1 N N N 15.320 27.321 36.775 -3.557 -3.757 -0.434 C14 3PM 18 TFN C17 C17 C 0 1 N N N 15.387 22.482 36.055 -0.745 0.339 0.738 C 3PM 19 TFN O18 O18 O 0 1 N N N 14.480 21.666 36.116 -0.575 0.541 1.922 O 3PM 20 TFN N19 N19 N 0 1 N N N 15.793 23.063 34.933 0.315 0.229 -0.086 N GLY 21 TFN C20 C20 C 0 1 N N N 15.106 22.854 33.632 1.674 0.353 0.447 CA GLY 22 TFN C21 C21 C 0 1 N N N 15.228 21.371 33.247 2.670 0.192 -0.673 C GLY 23 TFN O22 O22 O 0 1 N N N 16.280 20.757 33.443 2.283 -0.007 -1.804 O GLY 24 TFN N23 N23 N 0 1 N N N 14.126 20.815 32.740 3.991 0.269 -0.416 N23 00S 25 TFN C24 C24 C 0 1 N N N 14.112 19.392 32.371 4.959 0.112 -1.504 C16 00S 26 TFN C25 C25 C 0 1 Y N N 13.449 18.553 33.471 6.356 0.240 -0.955 C17 00S 27 TFN C30 C30 C 0 1 Y N N 13.864 18.587 34.806 7.026 -0.885 -0.507 C22 00S 28 TFN C29 C29 C 0 1 Y N N 13.227 17.793 35.768 8.306 -0.774 -0.003 C21 00S 29 TFN C28 C28 C 0 1 Y N N 12.176 16.947 35.399 8.924 0.475 0.053 C24 00S 30 TFN C31 C31 C 0 1 N N N 11.491 16.148 36.311 10.298 0.600 0.593 C27 00S 31 TFN N32 N32 N 0 1 N N N 10.201 15.924 36.132 10.931 -0.457 1.015 N35 00S 32 TFN N33 N33 N 0 1 N N N 12.080 15.655 37.396 10.906 1.835 0.647 N34 00S 33 TFN C27 C27 C 0 1 Y N N 11.770 16.921 34.061 8.245 1.605 -0.400 C19 00S 34 TFN C26 C26 C 0 1 Y N N 12.406 17.715 33.111 6.967 1.480 -0.907 C18 00S 35 TFN H7 H7 H 0 1 N N N 16.709 20.246 35.637 -4.825 -0.074 -1.080 H2A PMS 36 TFN H7A H7A H 0 1 N N N 15.750 19.241 36.777 -5.549 -0.959 0.284 H1 PMS 37 TFN H4 H4 H 0 1 N N N 16.322 16.929 37.021 -6.034 1.724 -2.176 H2 PMS 38 TFN H3 H3 H 0 1 N N N 17.813 15.001 36.563 -8.237 2.675 -2.727 H3 PMS 39 TFN H2 H2 H 0 1 N N N 20.046 15.369 35.547 -10.205 2.091 -1.368 H4 PMS 40 TFN H1 H1 H 0 1 N N N 20.763 17.667 34.958 -9.971 0.555 0.542 H5 PMS 41 TFN H6 H6 H 0 1 N N N 19.272 19.589 35.407 -7.769 -0.402 1.089 H6 PMS 42 TFN HN9 HN9 H 0 1 N N N 15.460 21.117 38.147 -2.903 0.033 2.164 HN9 3PM 43 TFN H10 H10 H 0 1 N N N 17.226 23.121 37.007 -2.311 0.985 -0.560 H10 3PM 44 TFN H11 H11 H 0 1 N N N 14.492 23.629 38.324 -3.350 -1.293 -0.770 H11 3PM 45 TFN H11A H11A H 0 0 N N N 16.071 24.092 39.045 -1.657 -1.250 -1.317 H11A 3PM 46 TFN H15 H15 H 0 1 N N N 13.586 27.193 38.996 -0.149 -3.522 -0.895 H15 3PM 47 TFN H15A H15A H 0 0 N N N 13.876 25.456 39.349 -1.278 -4.713 -1.585 H15A 3PM 48 TFN H15B H15B H 0 0 N N N 15.228 26.633 39.460 -1.451 -2.987 -1.985 H15B 3PM 49 TFN H16 H16 H 0 1 N N N 12.633 26.668 36.848 -2.392 -4.377 1.951 H16 3PM 50 TFN H16A H16A H 0 0 N N N 13.553 25.752 35.607 -1.827 -5.524 0.713 H16A 3PM 51 TFN H16B H16B H 0 0 N N N 12.899 24.903 37.048 -0.699 -4.333 1.404 H16B 3PM 52 TFN H14 H14 H 0 1 N N N 14.674 28.207 36.869 -3.828 -3.048 -1.216 H14 3PM 53 TFN H14A H14A H 0 0 N N N 16.285 27.517 37.266 -3.654 -4.774 -0.816 H14A 3PM 54 TFN H14B H14B H 0 0 N N N 15.488 27.102 35.710 -4.219 -3.626 0.421 H14B 3PM 55 TFN HN19 HN19 H 0 0 N N N 16.591 23.664 34.964 0.179 0.068 -1.033 H GLY 56 TFN H20 H20 H 0 1 N N N 14.044 23.127 33.725 1.797 1.335 0.904 HA2 GLY 57 TFN H20A H20A H 0 0 N N N 15.578 23.478 32.859 1.842 -0.420 1.197 HA3 GLY 58 TFN HN23 HN23 H 0 0 N N N 13.304 21.370 32.610 4.300 0.428 0.490 HN23 00S 59 TFN H24 H24 H 0 1 N N N 13.550 19.268 31.434 4.836 -0.869 -1.961 H16 00S 60 TFN H24A H24A H 0 0 N N N 15.146 19.046 32.227 4.791 0.886 -2.254 H16A 00S 61 TFN H30 H30 H 0 1 N N N 14.681 19.230 35.097 6.546 -1.851 -0.552 H22 00S 62 TFN H29 H29 H 0 1 N N N 13.548 17.834 36.798 8.827 -1.653 0.347 H21 00S 63 TFN HN32 HN32 H 0 0 N N N 9.808 15.382 36.875 11.830 -0.375 1.368 HN35 00S 64 TFN HN33 HN33 H 0 0 N N N 11.548 15.126 38.057 10.435 2.622 0.333 HN34 00S 65 TFN HN3A HN3A H 0 0 N N N 13.055 15.813 37.551 11.806 1.917 1.000 HN3A 00S 66 TFN H27 H27 H 0 1 N N N 10.955 16.279 33.762 8.718 2.574 -0.359 H19 00S 67 TFN H26 H26 H 0 1 N N N 12.083 17.677 32.081 6.441 2.354 -1.262 H18 00S 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TFN C5 C4 DOUB Y N 1 TFN C3 C4 SING Y N 2 TFN C4 H4 SING N N 3 TFN C2 C3 DOUB Y N 4 TFN C3 H3 SING N N 5 TFN C1 C2 SING Y N 6 TFN C2 H2 SING N N 7 TFN C1 C6 DOUB Y N 8 TFN C1 H1 SING N N 9 TFN C6 C5 SING Y N 10 TFN C6 H6 SING N N 11 TFN C5 C7 SING N N 12 TFN C7 S8 SING N N 13 TFN C7 H7 SING N N 14 TFN C7 H7A SING N N 15 TFN O35 S8 DOUB N N 16 TFN S8 N9 SING N N 17 TFN S8 O34 DOUB N N 18 TFN C10 N9 SING N N 19 TFN N9 HN9 SING N N 20 TFN C17 C10 SING N N 21 TFN C10 C11 SING N N 22 TFN C10 H10 SING N N 23 TFN O12 C11 SING N N 24 TFN C11 H11 SING N N 25 TFN C11 H11A SING N N 26 TFN O12 C13 SING N N 27 TFN C16 C13 SING N N 28 TFN C14 C13 SING N N 29 TFN C13 C15 SING N N 30 TFN C15 H15 SING N N 31 TFN C15 H15A SING N N 32 TFN C15 H15B SING N N 33 TFN C16 H16 SING N N 34 TFN C16 H16A SING N N 35 TFN C16 H16B SING N N 36 TFN C14 H14 SING N N 37 TFN C14 H14A SING N N 38 TFN C14 H14B SING N N 39 TFN N19 C17 SING N N 40 TFN C17 O18 DOUB N N 41 TFN C20 N19 SING N N 42 TFN N19 HN19 SING N N 43 TFN C21 C20 SING N N 44 TFN C20 H20 SING N N 45 TFN C20 H20A SING N N 46 TFN N23 C21 SING N N 47 TFN C21 O22 DOUB N N 48 TFN C24 N23 SING N N 49 TFN N23 HN23 SING N N 50 TFN C24 C25 SING N N 51 TFN C24 H24 SING N N 52 TFN C24 H24A SING N N 53 TFN C26 C25 DOUB Y N 54 TFN C25 C30 SING Y N 55 TFN C30 C29 DOUB Y N 56 TFN C30 H30 SING N N 57 TFN C28 C29 SING Y N 58 TFN C29 H29 SING N N 59 TFN C26 C27 SING Y N 60 TFN C26 H26 SING N N 61 TFN C27 C28 DOUB Y N 62 TFN C27 H27 SING N N 63 TFN C28 C31 SING N N 64 TFN N32 C31 DOUB N N 65 TFN C31 N33 SING N N 66 TFN N33 HN33 SING N N 67 TFN N33 HN3A SING N N 68 TFN N32 HN32 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TFN SMILES ACDLabs 12.01 "O=S(=O)(NC(C(=O)NCC(=O)NCc1ccc(C(=[N@H])N)cc1)COC(C)(C)C)Cc2ccccc2" TFN InChI InChI 1.03 "InChI=1S/C24H33N5O5S/c1-24(2,3)34-15-20(29-35(32,33)16-18-7-5-4-6-8-18)23(31)28-14-21(30)27-13-17-9-11-19(12-10-17)22(25)26/h4-12,20,29H,13-16H2,1-3H3,(H3,25,26)(H,27,30)(H,28,31)/t20-/m1/s1" TFN InChIKey InChI 1.03 NAEBSNBHOZLKPM-HXUWFJFHSA-N TFN SMILES_CANONICAL CACTVS 3.370 "CC(C)(C)OC[C@@H](N[S](=O)(=O)Cc1ccccc1)C(=O)NCC(=O)NCc2ccc(cc2)C(N)=N" TFN SMILES CACTVS 3.370 "CC(C)(C)OC[CH](N[S](=O)(=O)Cc1ccccc1)C(=O)NCC(=O)NCc2ccc(cc2)C(N)=N" TFN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C(/c1ccc(cc1)CNC(=O)CNC(=O)[C@@H](COC(C)(C)C)NS(=O)(=O)Cc2ccccc2)\N" TFN SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)(C)OCC(C(=O)NCC(=O)NCc1ccc(cc1)C(=N)N)NS(=O)(=O)Cc2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TFN "SYSTEMATIC NAME" ACDLabs 12.01 "N-(benzylsulfonyl)-O-tert-butyl-D-seryl-N-(4-carbamimidoylbenzyl)glycinamide" TFN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R)-N-[2-[(4-carbamimidoylphenyl)methylamino]-2-oxidanylidene-ethyl]-3-[(2-methylpropan-2-yl)oxy]-2-[(phenylmethyl)sulfonylamino]propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TFN "Create component" 2010-11-18 RCSB TFN "Modify aromatic_flag" 2011-06-04 RCSB TFN "Modify descriptor" 2011-06-04 RCSB TFN "Modify subcomponent list" 2012-01-11 RCSB #