data_TGF
#
_chem_comp.id TGF
_chem_comp.name
;2-[4-(4-{4-[(2-AMINO-5-FORMYL-4-OXO-3,4,5,6,7,8-HEXAHYDRO-PTERIDIN-6-YLMETHYL)-AMINO]-BENZOYLAMINO}-4-CARBOXY-BUTYRYLAM
INO)-4-CARBOXY-BUTYRYLAMINO]-PENTANEDIOIC ACID
;
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C30 H37 N9 O13"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms TRIGLU-5-FORMYL-TETRAHYDROFOLATE
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2002-12-02
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 731.667
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code TGF
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TGF N1 N1 N 0 1 Y N N -2.412 144.889 -24.165 3.725 -1.693 6.779 N1 TGF 1
TGF C2 C2 C 0 1 Y N N -2.989 145.244 -25.344 4.672 -0.883 6.355 C2 TGF 2
TGF NA2 NA2 N 0 1 N N N -4.053 144.804 -25.960 5.795 -1.414 5.775 NA2 TGF 3
TGF N3 N3 N 0 1 Y N N -2.307 146.280 -26.030 4.566 0.467 6.483 N3 TGF 4
TGF C4 C4 C 0 1 Y N N -1.138 146.956 -25.639 3.467 1.011 7.048 C4 TGF 5
TGF O4 O4 O 0 1 N N N -0.631 147.870 -26.361 3.359 2.222 7.165 O4 TGF 6
TGF C4A C4A C 0 1 Y N N -0.542 146.524 -24.323 2.456 0.156 7.502 C4A TGF 7
TGF N5 N5 N 0 1 N N N 0.708 147.093 -23.693 1.291 0.671 8.106 N5 TGF 8
TGF C6 C6 C 0 1 N N S 0.656 147.052 -22.249 0.120 -0.209 8.238 C6 TGF 9
TGF C7 C7 C 0 1 N N N 0.234 145.715 -21.736 0.610 -1.579 8.731 C7 TGF 10
TGF N8 N8 N 0 1 N N N -0.904 145.123 -22.299 1.621 -2.076 7.787 N8 TGF 11
TGF C8A C8A C 0 1 Y N N -1.243 145.483 -23.634 2.614 -1.215 7.350 C8A TGF 12
TGF C9 C9 C 0 1 N N N -0.301 148.086 -21.589 -0.566 -0.363 6.880 C9 TGF 13
TGF N10 N10 N 0 1 N N N 0.005 149.485 -22.066 -1.001 0.950 6.401 N10 TGF 14
TGF C11 C11 C 0 1 Y N N -2.339 152.961 -21.612 -2.957 1.289 2.744 C11 TGF 15
TGF C12 C12 C 0 1 Y N N -0.888 153.015 -21.393 -2.714 2.429 3.516 C12 TGF 16
TGF C13 C13 C 0 1 Y N N -0.105 151.863 -21.542 -2.066 2.313 4.725 C13 TGF 17
TGF C14 C14 C 0 1 Y N N -0.824 150.629 -21.924 -1.654 1.064 5.179 C14 TGF 18
TGF C15 C15 C 0 1 Y N N -2.192 150.513 -22.151 -1.891 -0.072 4.410 C15 TGF 19
TGF C16 C16 C 0 1 Y N N -2.944 151.739 -21.980 -2.542 0.036 3.203 C16 TGF 20
TGF C C C 0 1 N N N -3.207 154.147 -21.460 -3.652 1.409 1.448 C TGF 21
TGF O O O 0 1 N N N -4.419 154.021 -21.664 -4.012 2.500 1.050 O TGF 22
TGF NG1 NG1 N 0 1 N N N -2.682 155.332 -21.093 -3.886 0.310 0.704 NG1 TGF 23
TGF CA1 CA1 C 0 1 N N S -3.287 156.443 -20.299 -4.575 0.429 -0.582 CA1 TGF 24
TGF CB1 CB1 C 0 1 N N N -4.617 156.159 -19.535 -4.092 -0.675 -1.524 CB1 TGF 25
TGF CG1 CG1 C 0 1 N N N -4.678 155.087 -18.437 -2.583 -0.539 -1.738 CG1 TGF 26
TGF CT1 CT1 C 0 1 N N N -2.229 157.026 -19.333 -6.061 0.295 -0.371 CT1 TGF 27
TGF O11 O11 O 0 1 N N N -1.090 156.511 -19.312 -6.830 0.865 -1.107 O11 TGF 28
TGF O21 O21 O 0 1 N N N -2.553 157.997 -18.617 -6.530 -0.458 0.636 O21 TGF 29
TGF C5A C5A C 0 1 N N N 1.724 147.567 -24.461 1.251 1.943 8.551 C5A TGF 30
TGF O5B O5B O 0 1 N N N 2.509 146.734 -24.986 0.212 2.405 8.974 O5B TGF 31
TGF OEB OE11 O 0 1 N N N -4.884 156.707 -16.709 -2.897 -2.433 -3.111 OEB TGF 32
TGF CD1 CD1 C 0 1 N N N -5.275 155.604 -17.128 -2.107 -1.627 -2.666 CD1 TGF 33
TGF NG2 NG2 N 0 1 N N N -5.895 154.687 -16.350 -0.804 -1.705 -3.000 NG2 TGF 34
TGF CA2 CA2 C 0 1 N N S -6.964 154.926 -15.325 -0.342 -2.764 -3.902 CA2 TGF 35
TGF CB2 CB2 C 0 1 N N N -6.611 154.145 -14.039 0.866 -2.265 -4.696 CB2 TGF 36
TGF CG2 CG2 C 0 1 N N N -5.157 154.246 -13.557 0.466 -1.036 -5.515 CG2 TGF 37
TGF O12 O12 O 0 1 N N N -8.236 156.951 -15.429 -0.059 -5.079 -3.571 O12 TGF 38
TGF O22 O22 O 0 1 N N N -6.322 157.051 -14.333 0.526 -3.824 -1.849 O22 TGF 39
TGF CT2 CT2 C 0 1 N N N -7.182 156.427 -14.999 0.052 -3.974 -3.095 CT2 TGF 40
TGF OEC OE12 O 0 1 N N N -3.132 152.977 -13.946 2.720 -1.120 -6.209 OEC TGF 41
TGF CD2 CD2 C 0 1 N N N -4.371 152.983 -13.939 1.656 -0.544 -6.298 CD2 TGF 42
TGF NG3 NG3 N 0 1 N N N -5.131 151.920 -14.271 1.539 0.535 -7.096 NG3 TGF 43
TGF CA3 CA3 C 0 1 N N S -4.659 150.557 -14.461 2.696 1.013 -7.857 CA3 TGF 44
TGF CB3 CB3 C 0 1 N N N -5.518 149.589 -13.608 2.218 1.672 -9.152 CB3 TGF 45
TGF CG3 CG3 C 0 1 N N N -6.909 149.261 -14.154 1.444 0.651 -9.988 CG3 TGF 46
TGF CD3 CD3 C 0 1 N N N -7.992 149.235 -13.093 0.973 1.300 -11.264 CD3 TGF 47
TGF OED OE13 O 0 1 N N N -8.182 148.177 -12.457 1.230 2.460 -11.482 OED TGF 48
TGF OEN OE23 O 0 1 N N N -8.657 150.276 -12.901 0.268 0.589 -12.159 OEN TGF 49
TGF O13 O13 O 0 1 N N N -4.107 149.174 -16.328 4.652 2.136 -7.176 O13 TGF 50
TGF O23 O23 O 0 1 N N N -5.412 150.876 -16.727 2.811 2.783 -6.140 O23 TGF 51
TGF CT3 CT3 C 0 1 N N N -4.730 150.175 -15.954 3.458 2.018 -7.033 CT3 TGF 52
TGF HA21 1HA2 H 0 0 N N N -4.801 144.894 -25.273 5.885 -2.375 5.682 HA21 TGF 53
TGF HA22 2HA2 H 0 0 N N N -4.486 145.070 -26.844 6.499 -0.828 5.455 HA22 TGF 54
TGF H3 H3 H 0 1 N N N -2.709 146.577 -26.919 5.279 1.040 6.160 H3 TGF 55
TGF H6 H6 H 0 1 N N N 1.706 147.299 -21.967 -0.578 0.213 8.959 H6 TGF 56
TGF H71 1H7 H 0 1 N N N 0.107 145.772 -20.630 1.051 -1.477 9.722 H71 TGF 57
TGF H72 2H7 H 0 1 N N N 1.091 145.006 -21.815 -0.227 -2.275 8.771 H72 TGF 58
TGF H8 H8 H 0 1 N N N -1.706 145.290 -21.691 1.594 -2.994 7.474 H8 TGF 59
TGF H91 1H9 H 0 1 N N N -0.278 148.016 -20.476 0.132 -0.798 6.166 H91 TGF 60
TGF H92 2H9 H 0 1 N N N -1.371 147.820 -21.753 -1.433 -1.017 6.984 H92 TGF 61
TGF H10 H10 H 0 1 N N N 0.213 149.407 -23.061 -0.832 1.742 6.936 H10 TGF 62
TGF H12 H12 H 0 1 N N N -0.372 153.947 -21.108 -3.033 3.398 3.164 H12 TGF 63
TGF H13 H13 H 0 1 N N N 0.983 151.922 -21.373 -1.878 3.193 5.322 H13 TGF 64
TGF H15 H15 H 0 1 N N N -2.636 149.545 -22.438 -1.569 -1.040 4.764 H15 TGF 65
TGF H16 H16 H 0 1 N N N -4.036 151.742 -22.138 -2.730 -0.846 2.608 H16 TGF 66
TGF HG1 HG1 H 0 1 N N N -1.730 155.394 -21.453 -3.598 -0.560 1.021 HG1 TGF 67
TGF HA1 HA1 H 0 1 N N N -3.603 157.176 -21.077 -4.357 1.402 -1.022 HA1 TGF 68
TGF HB11 1HB1 H 0 0 N N N -5.408 155.932 -20.287 -4.310 -1.648 -1.084 HB11 TGF 69
TGF HB12 2HB1 H 0 0 N N N -4.982 157.120 -19.104 -4.605 -0.587 -2.481 HB12 TGF 70
TGF HG11 1HG1 H 0 0 N N N -3.673 154.636 -18.265 -2.365 0.433 -2.178 HG11 TGF 71
TGF HG12 2HG1 H 0 0 N N N -5.225 154.183 -18.794 -2.070 -0.628 -0.781 HG12 TGF 72
TGF H21 H21 H 0 1 N N N -1.903 158.355 -18.024 -7.484 -0.544 0.771 H21 TGF 73
TGF H5A H5A H 0 1 N N N 1.913 148.635 -24.660 2.144 2.550 8.532 H5A TGF 74
TGF HG2 HG2 H 0 1 N N N -5.533 153.755 -16.549 -0.173 -1.061 -2.644 HG2 TGF 75
TGF HA2 HA2 H 0 1 N N N -7.926 154.562 -15.756 -1.144 -3.031 -4.590 HA2 TGF 76
TGF HB21 1HB2 H 0 0 N N N -6.893 153.073 -14.161 1.668 -1.997 -4.008 HB21 TGF 77
TGF HB22 2HB2 H 0 0 N N N -7.301 154.444 -13.216 1.210 -3.052 -5.367 HB22 TGF 78
TGF HG21 1HG2 H 0 0 N N N -5.097 154.455 -12.463 -0.335 -1.303 -6.203 HG21 TGF 79
TGF HG22 2HG2 H 0 0 N N N -4.660 155.171 -13.932 0.122 -0.248 -4.844 HG22 TGF 80
TGF H22 H22 H 0 1 N N N -6.455 157.970 -14.133 0.779 -4.601 -1.331 H22 TGF 81
TGF HG3 HG3 H 0 1 N N N -6.116 152.160 -14.384 0.688 0.995 -7.167 HG3 TGF 82
TGF HA3 HA3 H 0 1 N N N -3.596 150.483 -14.131 3.346 0.171 -8.096 HA3 TGF 83
TGF HB31 1HB3 H 0 0 N N N -5.604 149.979 -12.567 1.568 2.513 -8.913 HB31 TGF 84
TGF HB32 2HB3 H 0 0 N N N -4.953 148.646 -13.424 3.079 2.027 -9.718 HB32 TGF 85
TGF HG31 1HG3 H 0 0 N N N -6.892 148.301 -14.722 2.094 -0.190 -10.228 HG31 TGF 86
TGF HG32 2HG3 H 0 0 N N N -7.183 149.961 -14.978 0.583 0.295 -9.422 HG32 TGF 87
TGF H23E EH23 H 0 0 N N N -9.335 150.260 -12.236 -0.033 1.006 -12.977 H23E TGF 88
TGF H23 H23 H 0 1 N N N -5.456 150.641 -17.646 3.300 3.429 -5.611 H23 TGF 89
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TGF N1 C2 DOUB Y N 1
TGF N1 C8A SING Y N 2
TGF C2 NA2 SING N N 3
TGF C2 N3 SING Y N 4
TGF NA2 HA21 SING N N 5
TGF NA2 HA22 SING N N 6
TGF N3 C4 SING Y N 7
TGF N3 H3 SING N N 8
TGF C4 O4 DOUB N N 9
TGF C4 C4A SING Y N 10
TGF C4A N5 SING N N 11
TGF C4A C8A DOUB Y N 12
TGF N5 C6 SING N N 13
TGF N5 C5A SING N N 14
TGF C6 C7 SING N N 15
TGF C6 C9 SING N N 16
TGF C6 H6 SING N N 17
TGF C7 N8 SING N N 18
TGF C7 H71 SING N N 19
TGF C7 H72 SING N N 20
TGF N8 C8A SING N N 21
TGF N8 H8 SING N N 22
TGF C9 N10 SING N N 23
TGF C9 H91 SING N N 24
TGF C9 H92 SING N N 25
TGF N10 C14 SING N N 26
TGF N10 H10 SING N N 27
TGF C11 C12 DOUB Y N 28
TGF C11 C16 SING Y N 29
TGF C11 C SING N N 30
TGF C12 C13 SING Y N 31
TGF C12 H12 SING N N 32
TGF C13 C14 DOUB Y N 33
TGF C13 H13 SING N N 34
TGF C14 C15 SING Y N 35
TGF C15 C16 DOUB Y N 36
TGF C15 H15 SING N N 37
TGF C16 H16 SING N N 38
TGF C O DOUB N N 39
TGF C NG1 SING N N 40
TGF NG1 CA1 SING N N 41
TGF NG1 HG1 SING N N 42
TGF CA1 CB1 SING N N 43
TGF CA1 CT1 SING N N 44
TGF CA1 HA1 SING N N 45
TGF CB1 CG1 SING N N 46
TGF CB1 HB11 SING N N 47
TGF CB1 HB12 SING N N 48
TGF CG1 CD1 SING N N 49
TGF CG1 HG11 SING N N 50
TGF CG1 HG12 SING N N 51
TGF CT1 O11 DOUB N N 52
TGF CT1 O21 SING N N 53
TGF O21 H21 SING N N 54
TGF C5A O5B DOUB N N 55
TGF C5A H5A SING N N 56
TGF OEB CD1 DOUB N N 57
TGF CD1 NG2 SING N N 58
TGF NG2 CA2 SING N N 59
TGF NG2 HG2 SING N N 60
TGF CA2 CB2 SING N N 61
TGF CA2 CT2 SING N N 62
TGF CA2 HA2 SING N N 63
TGF CB2 CG2 SING N N 64
TGF CB2 HB21 SING N N 65
TGF CB2 HB22 SING N N 66
TGF CG2 CD2 SING N N 67
TGF CG2 HG21 SING N N 68
TGF CG2 HG22 SING N N 69
TGF O12 CT2 DOUB N N 70
TGF O22 CT2 SING N N 71
TGF O22 H22 SING N N 72
TGF OEC CD2 DOUB N N 73
TGF CD2 NG3 SING N N 74
TGF NG3 CA3 SING N N 75
TGF NG3 HG3 SING N N 76
TGF CA3 CB3 SING N N 77
TGF CA3 CT3 SING N N 78
TGF CA3 HA3 SING N N 79
TGF CB3 CG3 SING N N 80
TGF CB3 HB31 SING N N 81
TGF CB3 HB32 SING N N 82
TGF CG3 CD3 SING N N 83
TGF CG3 HG31 SING N N 84
TGF CG3 HG32 SING N N 85
TGF CD3 OED DOUB N N 86
TGF CD3 OEN SING N N 87
TGF OEN H23E SING N N 88
TGF O13 CT3 DOUB N N 89
TGF O23 CT3 SING N N 90
TGF O23 H23 SING N N 91
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TGF SMILES ACDLabs 10.04 "O=C(O)C(NC(=O)CCC(C(=O)O)NC(=O)CCC(C(=O)O)NC(=O)c1ccc(cc1)NCC2N(C=3C(=O)NC(=NC=3NC2)N)C=O)CCC(=O)O"
TGF SMILES_CANONICAL CACTVS 3.341 "NC1=NC2=C(N(C=O)[C@@H](CNc3ccc(cc3)C(=O)N[C@@H](CCC(=O)N[C@@H](CCC(=O)N[C@@H](CCC(O)=O)C(O)=O)C(O)=O)C(O)=O)CN2)C(=O)N1"
TGF SMILES CACTVS 3.341 "NC1=NC2=C(N(C=O)[CH](CNc3ccc(cc3)C(=O)N[CH](CCC(=O)N[CH](CCC(=O)N[CH](CCC(O)=O)C(O)=O)C(O)=O)C(O)=O)CN2)C(=O)N1"
TGF SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1C(=O)N[C@@H](CCC(=O)N[C@@H](CCC(=O)N[C@@H](CCC(=O)O)C(=O)O)C(=O)O)C(=O)O)NC[C@H]2CNC3=C(N2C=O)C(=O)NC(=N3)N"
TGF SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1C(=O)NC(CCC(=O)NC(CCC(=O)NC(CCC(=O)O)C(=O)O)C(=O)O)C(=O)O)NCC2CNC3=C(N2C=O)C(=O)NC(=N3)N"
TGF InChI InChI 1.03 "InChI=1S/C30H37N9O13/c31-30-37-24-23(26(46)38-30)39(13-40)16(12-33-24)11-32-15-3-1-14(2-4-15)25(45)36-19(29(51)52)6-9-21(42)34-17(27(47)48)5-8-20(41)35-18(28(49)50)7-10-22(43)44/h1-4,13,16-19,32H,5-12H2,(H,34,42)(H,35,41)(H,36,45)(H,43,44)(H,47,48)(H,49,50)(H,51,52)(H4,31,33,37,38,46)/t16-,17-,18-,19-/m0/s1"
TGF InChIKey InChI 1.03 ZLOMJLIQXBKNHU-VJANTYMQSA-N
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TGF "SYSTEMATIC NAME" ACDLabs 10.04 "N-{[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-gamma-glutamyl-L-gamma-glutamyl-L-glutamic acid"
TGF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-[[(4S)-4-[[(4S)-4-[[4-[[(6S)-2-amino-5-methanoyl-4-oxo-3,6,7,8-tetrahydropteridin-6-yl]methylamino]phenyl]carbonylamino]-5-hydroxy-5-oxo-pentanoyl]amino]-5-hydroxy-5-oxo-pentanoyl]amino]pentanedioic acid"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TGF "Create component" 2002-12-02 RCSB
TGF "Modify descriptor" 2011-06-04 RCSB
TGF "Modify synonyms" 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id TGF
_pdbx_chem_comp_synonyms.name TRIGLU-5-FORMYL-TETRAHYDROFOLATE
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##