data_TGY # _chem_comp.id TGY _chem_comp.name 1-deoxy-alpha-D-tagatopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1-deoxy-alpha-D-tagatose; 1-deoxy-D-tagatose; 1-deoxy-tagatose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-03-26 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 164.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TGY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4YTQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 TGY 1-deoxy-alpha-D-tagatose PDB ? 2 TGY 1-deoxy-D-tagatose PDB ? 3 TGY 1-deoxy-tagatose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TGY C5 C5 C 0 1 N N R -9.307 27.761 64.795 -1.388 -0.521 -0.419 C5 TGY 1 TGY C6 C6 C 0 1 N N N -9.713 28.323 63.427 -0.360 -1.655 -0.441 C6 TGY 2 TGY C2 C2 C 0 1 N N S -12.025 27.644 63.747 1.415 -0.160 0.162 C2 TGY 3 TGY C4 C4 C 0 1 N N S -10.502 27.778 65.753 -0.941 0.544 0.588 C4 TGY 4 TGY C1 C1 C 0 1 N N N -13.120 26.870 63.031 2.803 0.315 -0.276 C1 TGY 5 TGY O2 O2 O 0 1 N Y N -12.409 29.005 63.880 1.501 -0.752 1.459 O2 TGY 6 TGY C3 C3 C 0 1 N N S -11.710 27.063 65.134 0.459 1.035 0.208 C3 TGY 7 TGY O3 O3 O 0 1 N N N -11.451 25.670 65.029 0.413 1.660 -1.076 O3 TGY 8 TGY O4 O4 O 0 1 N N N -10.142 27.151 66.975 -1.857 1.641 0.562 O4 TGY 9 TGY O5 O5 O 0 1 N N N -8.248 28.536 65.340 -2.663 -1.038 -0.033 O5 TGY 10 TGY O6 O6 O 0 1 N N N -10.850 27.595 62.908 0.925 -1.125 -0.771 O6 TGY 11 TGY H5 H1 H 0 1 N N N -8.981 26.719 64.661 -1.461 -0.075 -1.411 H5 TGY 12 TGY H61 H2 H 0 1 N N N -8.869 28.225 62.729 -0.318 -2.126 0.541 H61 TGY 13 TGY H62 H3 H 0 1 N N N -9.979 29.385 63.534 -0.651 -2.395 -1.187 H62 TGY 14 TGY H4 H4 H 0 1 N N N -10.780 28.826 65.940 -0.919 0.112 1.589 H4 TGY 15 TGY H11 H5 H 0 1 N N N -14.037 26.883 63.639 3.483 -0.536 -0.309 H11 TGY 16 TGY H12 H6 H 0 1 N N N -13.321 27.337 62.055 2.737 0.766 -1.265 H12 TGY 17 TGY H7 H7 H 0 1 N N N -12.795 25.830 62.880 3.176 1.051 0.436 H7 TGY 18 TGY HO2 H8 H 0 1 N Y N -13.182 29.064 64.429 2.091 -1.516 1.505 HO2 TGY 19 TGY H3 H9 H 0 1 N N N -12.581 27.232 65.784 0.807 1.752 0.951 H3 TGY 20 TGY HO3 H10 H 0 1 N Y N -11.257 25.318 65.890 -0.175 2.426 -1.120 HO3 TGY 21 TGY HO4 H11 H 0 1 N Y N -10.884 27.162 67.568 -2.766 1.400 0.787 HO4 TGY 22 TGY HO5 H12 H 0 1 N Y N -8.001 28.184 66.187 -3.008 -1.719 -0.628 HO5 TGY 23 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TGY O6 C6 SING N N 1 TGY O6 C2 SING N N 2 TGY C1 C2 SING N N 3 TGY C6 C5 SING N N 4 TGY C2 O2 SING N N 5 TGY C2 C3 SING N N 6 TGY C5 O5 SING N N 7 TGY C5 C4 SING N N 8 TGY O3 C3 SING N N 9 TGY C3 C4 SING N N 10 TGY C4 O4 SING N N 11 TGY C5 H5 SING N N 12 TGY C6 H61 SING N N 13 TGY C6 H62 SING N N 14 TGY C4 H4 SING N N 15 TGY C1 H11 SING N N 16 TGY C1 H12 SING N N 17 TGY C1 H7 SING N N 18 TGY O2 HO2 SING N N 19 TGY C3 H3 SING N N 20 TGY O3 HO3 SING N N 21 TGY O4 HO4 SING N N 22 TGY O5 HO5 SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TGY SMILES ACDLabs 12.01 "C1(O)C(O)C(C(O)(C)OC1)O" TGY InChI InChI 1.03 "InChI=1S/C6H12O5/c1-6(10)5(9)4(8)3(7)2-11-6/h3-5,7-10H,2H2,1H3/t3-,4+,5+,6+/m1/s1" TGY InChIKey InChI 1.03 YLWWLYACYNLGLT-VANKVMQKSA-N TGY SMILES_CANONICAL CACTVS 3.385 "C[C@]1(O)OC[C@@H](O)[C@H](O)[C@@H]1O" TGY SMILES CACTVS 3.385 "C[C]1(O)OC[CH](O)[CH](O)[CH]1O" TGY SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C[C@]1([C@H]([C@H]([C@@H](CO1)O)O)O)O" TGY SMILES "OpenEye OEToolkits" 1.9.2 "CC1(C(C(C(CO1)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TGY "SYSTEMATIC NAME" ACDLabs 12.01 1-deoxy-alpha-D-tagatopyranose TGY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S,3S,4S,5R)-2-methyloxane-2,3,4,5-tetrol" TGY "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-D-1-deoxy-Tagp # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support TGY "CARBOHYDRATE ISOMER" D PDB ? TGY "CARBOHYDRATE RING" pyranose PDB ? TGY "CARBOHYDRATE ANOMER" alpha PDB ? TGY "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TGY "Create component" 2015-03-26 PDBJ TGY "Initial release" 2016-03-23 RCSB TGY "Other modification" 2020-07-03 RCSB TGY "Modify synonyms" 2020-07-17 RCSB TGY "Modify linking type" 2020-07-17 RCSB TGY "Modify atom id" 2020-07-17 RCSB TGY "Modify component atom id" 2020-07-17 RCSB TGY "Modify leaving atom flag" 2020-07-17 RCSB ##