data_TM0 # _chem_comp.id TM0 _chem_comp.name "(1R)-1-(3-benzyl-1,2,4-oxadiazol-5-yl)ethan-1-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H13 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-28 _chem_comp.pdbx_modified_date 2023-11-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 203.240 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TM0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GOG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TM0 N1 N1 N 0 1 Y N N N N N 2.559 -5.736 -55.533 -1.128 -0.004 -0.912 N1 TM0 1 TM0 C4 C1 C 0 1 N N N N N N 2.206 -3.378 -54.771 1.036 -1.339 -1.015 C4 TM0 2 TM0 C5 C2 C 0 1 Y N N N N N 1.808 -3.564 -53.326 2.134 -0.470 -0.460 C5 TM0 3 TM0 C6 C3 C 0 1 Y N N N N N 0.472 -3.568 -52.951 2.800 -0.848 0.690 C6 TM0 4 TM0 C7 C4 C 0 1 Y N N N N N 0.109 -3.789 -51.633 3.808 -0.050 1.200 C7 TM0 5 TM0 C8 C5 C 0 1 Y N N N N N 1.074 -3.998 -50.676 4.149 1.126 0.559 C8 TM0 6 TM0 C10 C6 C 0 1 Y N N N N N 2.768 -3.770 -52.347 2.479 0.704 -1.104 C10 TM0 7 TM0 N N2 N 0 1 N N N N N N 3.857 -8.152 -56.492 -3.654 1.501 1.128 N TM0 8 TM0 C C7 C 0 1 N N N N N N 2.642 -7.780 -58.560 -4.553 0.071 -0.646 C TM0 9 TM0 O O1 O 0 1 Y N N N N N 1.164 -5.765 -57.231 -1.881 -0.857 0.885 O TM0 10 TM0 C1 C8 C 0 1 N N R N N N 2.557 -7.758 -57.037 -3.360 0.911 -0.185 C1 TM0 11 TM0 C2 C9 C 0 1 Y N N N N N 2.102 -6.419 -56.529 -2.139 0.033 -0.078 C2 TM0 12 TM0 C3 C10 C 0 1 Y N N N N N 1.886 -4.548 -55.645 -0.284 -0.926 -0.417 C3 TM0 13 TM0 C9 C11 C 0 1 Y N N N N N 2.402 -3.979 -51.030 3.483 1.504 -0.592 C9 TM0 14 TM0 N2 N3 N 0 1 Y N N N N N 1.031 -4.496 -56.619 -0.815 -1.395 0.673 N2 TM0 15 TM0 H1 H1 H 0 1 N N N N N N 3.291 -3.203 -54.811 0.995 -1.226 -2.099 H1 TM0 16 TM0 H2 H2 H 0 1 N N N N N N 1.678 -2.497 -55.165 1.237 -2.382 -0.767 H2 TM0 17 TM0 H3 H3 H 0 1 N N N N N N -0.292 -3.397 -53.695 2.534 -1.767 1.191 H3 TM0 18 TM0 H4 H4 H 0 1 N N N N N N -0.935 -3.797 -51.356 4.328 -0.345 2.099 H4 TM0 19 TM0 H5 H5 H 0 1 N N N N N N 0.789 -4.176 -49.650 4.936 1.750 0.957 H5 TM0 20 TM0 H6 H6 H 0 1 N N N N N N 3.814 -3.767 -52.616 1.961 0.997 -2.006 H6 TM0 21 TM0 H7 H7 H 0 1 N N N N N N 3.817 -8.142 -55.493 -4.469 2.095 1.082 H7 TM0 22 TM0 H8 H8 H 0 1 N N N N N N 4.085 -9.073 -56.807 -3.767 0.785 1.829 H8 TM0 23 TM0 H10 H10 H 0 1 N N N N N N 2.977 -8.773 -58.895 -4.739 -0.723 0.076 H10 TM0 24 TM0 H11 H11 H 0 1 N N N N N N 1.651 -7.565 -58.986 -5.436 0.706 -0.723 H11 TM0 25 TM0 H12 H12 H 0 1 N N N N N N 3.359 -7.018 -58.898 -4.334 -0.367 -1.620 H12 TM0 26 TM0 H13 H13 H 0 1 N N N N N N 1.811 -8.507 -56.733 -3.173 1.705 -0.907 H13 TM0 27 TM0 H14 H14 H 0 1 N N N N N N 3.162 -4.128 -50.277 3.752 2.421 -1.095 H14 TM0 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TM0 C C1 SING N N 1 TM0 O N2 SING Y N 2 TM0 O C2 SING Y N 3 TM0 C1 C2 SING N N 4 TM0 C1 N SING N N 5 TM0 N2 C3 DOUB Y N 6 TM0 C2 N1 DOUB Y N 7 TM0 C3 N1 SING Y N 8 TM0 C3 C4 SING N N 9 TM0 C4 C5 SING N N 10 TM0 C5 C6 DOUB Y N 11 TM0 C5 C10 SING Y N 12 TM0 C6 C7 SING Y N 13 TM0 C10 C9 DOUB Y N 14 TM0 C7 C8 DOUB Y N 15 TM0 C9 C8 SING Y N 16 TM0 C4 H1 SING N N 17 TM0 C4 H2 SING N N 18 TM0 C6 H3 SING N N 19 TM0 C7 H4 SING N N 20 TM0 C8 H5 SING N N 21 TM0 C10 H6 SING N N 22 TM0 N H7 SING N N 23 TM0 N H8 SING N N 24 TM0 C H10 SING N N 25 TM0 C H11 SING N N 26 TM0 C H12 SING N N 27 TM0 C1 H13 SING N N 28 TM0 C9 H14 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TM0 SMILES ACDLabs 12.01 "CC(N)c1nc(Cc2ccccc2)no1" TM0 InChI InChI 1.06 "InChI=1S/C11H13N3O/c1-8(12)11-13-10(14-15-11)7-9-5-3-2-4-6-9/h2-6,8H,7,12H2,1H3/t8-/m1/s1" TM0 InChIKey InChI 1.06 TXLVGLOXMNZBCL-MRVPVSSYSA-N TM0 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](N)c1onc(Cc2ccccc2)n1" TM0 SMILES CACTVS 3.385 "C[CH](N)c1onc(Cc2ccccc2)n1" TM0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1nc(no1)Cc2ccccc2)N" TM0 SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1nc(no1)Cc2ccccc2)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TM0 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R)-1-(3-benzyl-1,2,4-oxadiazol-5-yl)ethan-1-amine" TM0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R})-1-[3-(phenylmethyl)-1,2,4-oxadiazol-5-yl]ethanamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TM0 "Create component" 2023-08-28 RCSB TM0 "Initial release" 2023-11-29 RCSB #