data_TMV # _chem_comp.id TMV _chem_comp.name THIAMINE-PHOSPHOVANADATE _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H21 N4 O8 P S V" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2013-06-05 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 463.297 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TMV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4BRH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TMV O2A O2A O 0 1 N N N 61.289 3.184 8.680 -3.609 -1.548 -0.348 O2A TMV 1 TMV PA PA P 0 1 N N N 61.865 2.561 9.931 -3.307 -0.123 -0.087 PA TMV 2 TMV O1A O1A O 0 1 N N N 63.272 2.164 9.800 -3.268 0.681 -1.482 O1A TMV 3 TMV O3A O3A O 0 1 N N N 61.522 3.479 11.164 -4.448 0.502 0.861 O3A TMV 4 TMV VB VB V 0 1 N N N 60.515 5.108 11.508 -6.141 0.428 0.144 VB TMV 5 TMV O4B O4B O 0 1 N N N 59.390 6.930 11.589 -7.834 0.353 -0.574 O4B TMV 6 TMV O1B O1B O 0 1 N N N 59.404 4.686 10.057 -5.581 1.447 -1.282 O1B TMV 7 TMV O3B O3B O 0 1 N N N 61.957 6.013 11.349 -6.815 1.242 1.650 O3B TMV 8 TMV O2B O2B O 0 1 N N N 60.056 4.758 13.076 -6.027 -1.407 0.064 O2B TMV 9 TMV O7 O7 O 0 1 N N N 61.010 1.228 10.219 -1.877 -0.002 0.642 O7 TMV 10 TMV C7 C7 C 0 1 N N N 60.878 0.357 9.098 -0.678 -0.561 0.102 C7 TMV 11 TMV C6 C6 C 0 1 N N N 60.021 -0.849 9.420 0.492 -0.265 1.043 C6 TMV 12 TMV C5 C5 C 0 1 Y N N 60.577 -2.014 10.253 1.757 -0.853 0.473 C5 TMV 13 TMV C4 C4 C 0 1 Y N N 61.329 -3.092 9.596 2.611 -0.236 -0.348 C4 TMV 14 TMV CM4 CM4 C 0 1 N N N 61.120 -3.623 8.190 2.406 1.179 -0.824 CM4 TMV 15 TMV N3 N3 N 1 1 Y N N 62.174 -3.621 10.389 3.647 -0.966 -0.709 N3 TMV 16 TMV C2 C2 C 0 1 Y N N 62.486 -2.907 11.385 3.714 -2.165 -0.237 C2 TMV 17 TMV S1 S1 S 0 1 Y N N 61.532 -1.541 11.647 2.374 -2.475 0.778 S1 TMV 18 TMV "C7'" "C7'" C 0 1 N N N 62.758 -4.947 10.179 4.677 -0.439 -1.607 "C7'" TMV 19 TMV "C5'" "C5'" C 0 1 Y N N 61.873 -6.153 10.499 5.697 0.330 -0.806 "C5'" TMV 20 TMV "C4'" "C4'" C 0 1 Y N N 61.985 -7.453 9.749 6.769 -0.325 -0.196 "C4'" TMV 21 TMV "N4'" "N4'" N 0 1 N N N 62.839 -7.596 8.692 6.918 -1.697 -0.317 "N4'" TMV 22 TMV "N3'" "N3'" N 0 1 Y N N 61.200 -8.492 10.132 7.646 0.391 0.502 "N3'" TMV 23 TMV "C2'" "C2'" C 0 1 Y N N 60.320 -8.345 11.166 7.509 1.696 0.619 "C2'" TMV 24 TMV CM2 CM2 C 0 1 N N N 59.434 -9.482 11.572 8.524 2.471 1.418 CM2 TMV 25 TMV "N1'" "N1'" N 0 1 Y N N 60.198 -7.170 11.849 6.508 2.342 0.055 "N1'" TMV 26 TMV "C6'" "C6'" C 0 1 Y N N 60.955 -6.088 11.547 5.596 1.699 -0.661 "C6'" TMV 27 TMV H1 H1 H 0 1 N N N 63.581 2.375 8.927 -3.075 1.624 -1.386 H1 TMV 28 TMV H6 H6 H 0 1 N N N 61.878 0.013 8.795 -0.795 -1.639 -0.004 H6 TMV 29 TMV H7 H7 H 0 1 N N N 60.415 0.912 8.269 -0.479 -0.119 -0.874 H7 TMV 30 TMV H8 H8 H 0 1 N N N 59.140 -0.472 9.959 0.609 0.814 1.149 H8 TMV 31 TMV H9 H9 H 0 1 N N N 59.706 -1.276 8.456 0.293 -0.706 2.020 H9 TMV 32 TMV H12 H12 H 0 1 N N N 61.778 -3.085 7.492 2.883 1.869 -0.128 H12 TMV 33 TMV H13 H13 H 0 1 N N N 61.358 -4.697 8.164 2.847 1.298 -1.813 H13 TMV 34 TMV H14 H14 H 0 1 N N N 60.071 -3.473 7.894 1.338 1.395 -0.874 H14 TMV 35 TMV H16 H16 H 0 1 N N N 63.315 -3.157 12.030 4.505 -2.869 -0.449 H16 TMV 36 TMV H18 H18 H 0 1 N N N 63.047 -5.019 9.120 5.168 -1.265 -2.121 H18 TMV 37 TMV H19 H19 H 0 1 N N N 63.656 -5.018 10.810 4.217 0.223 -2.340 H19 TMV 38 TMV H20 H20 H 0 1 N N N 62.758 -8.521 8.320 7.666 -2.143 0.110 H20 TMV 39 TMV H21 H21 H 0 1 N N N 62.606 -6.930 7.983 6.273 -2.211 -0.828 H21 TMV 40 TMV H22 H22 H 0 1 N N N 59.632 -10.350 10.927 9.333 2.794 0.762 H22 TMV 41 TMV H23 H23 H 0 1 N N N 59.638 -9.750 12.619 8.047 3.345 1.862 H23 TMV 42 TMV H24 H24 H 0 1 N N N 58.381 -9.181 11.469 8.927 1.837 2.207 H24 TMV 43 TMV H25 H25 H 0 1 N N N 60.848 -5.177 12.117 4.783 2.239 -1.122 H25 TMV 44 TMV H2B H2B H 0 1 N N N 60.736 5.040 13.676 -6.344 -1.856 0.859 H2B TMV 45 TMV H1B H1B H 0 1 N N N 59.883 4.148 9.437 -5.680 2.400 -1.147 H1B TMV 46 TMV H4B H4B H 0 1 N N N 59.713 7.471 12.300 -8.250 1.218 -0.689 H4B TMV 47 TMV H3B H3B H 0 1 N N N 62.365 6.112 12.201 -7.772 1.381 1.627 H3B TMV 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TMV CM4 C4 SING N N 1 TMV O2A PA DOUB N N 2 TMV "N4'" "C4'" SING N N 3 TMV C7 C6 SING N N 4 TMV C7 O7 SING N N 5 TMV C6 C5 SING N N 6 TMV C4 C5 DOUB Y N 7 TMV C4 N3 SING Y N 8 TMV "C4'" "N3'" DOUB Y N 9 TMV "C4'" "C5'" SING Y N 10 TMV O1A PA SING N N 11 TMV PA O7 SING N N 12 TMV PA O3A SING N N 13 TMV O1B VB SING N N 14 TMV "N3'" "C2'" SING Y N 15 TMV "C7'" N3 SING N N 16 TMV "C7'" "C5'" SING N N 17 TMV C5 S1 SING Y N 18 TMV N3 C2 DOUB Y N 19 TMV "C5'" "C6'" DOUB Y N 20 TMV O3A VB SING N N 21 TMV "C2'" CM2 SING N N 22 TMV "C2'" "N1'" DOUB Y N 23 TMV O3B VB SING N N 24 TMV C2 S1 SING Y N 25 TMV VB O4B SING N N 26 TMV VB O2B SING N N 27 TMV "C6'" "N1'" SING Y N 28 TMV O1A H1 SING N N 29 TMV C7 H6 SING N N 30 TMV C7 H7 SING N N 31 TMV C6 H8 SING N N 32 TMV C6 H9 SING N N 33 TMV CM4 H12 SING N N 34 TMV CM4 H13 SING N N 35 TMV CM4 H14 SING N N 36 TMV C2 H16 SING N N 37 TMV "C7'" H18 SING N N 38 TMV "C7'" H19 SING N N 39 TMV "N4'" H20 SING N N 40 TMV "N4'" H21 SING N N 41 TMV CM2 H22 SING N N 42 TMV CM2 H23 SING N N 43 TMV CM2 H24 SING N N 44 TMV "C6'" H25 SING N N 45 TMV O2B H2B SING N N 46 TMV O1B H1B SING N N 47 TMV O4B H4B SING N N 48 TMV O3B H3B SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TMV SMILES ACDLabs 12.01 "O=P(O[V](O)(O)(O)O)(O)OCCc1sc[n+](c1C)Cc2c(nc(nc2)C)N" TMV InChI InChI 1.03 "InChI=1S/C12H17N4O4PS.4H2O.V/c1-8-11(3-4-20-21(17,18)19)22-7-16(8)6-10-5-14-9(2)15-12(10)13;;;;;/h5,7H,3-4,6H2,1-2H3,(H3-,13,14,15,17,18,19);4*1H2;/q;;;;;+5/p-4" TMV InChIKey InChI 1.03 FXAJDHPXAUOYGO-UHFFFAOYSA-J TMV SMILES_CANONICAL CACTVS 3.385 "Cc1ncc(C[n+]2csc(CCO[P](O)(=O)O[V](O)(O)(O)O)c2C)c(N)n1" TMV SMILES CACTVS 3.385 "Cc1ncc(C[n+]2csc(CCO[P](O)(=O)O[V](O)(O)(O)O)c2C)c(N)n1" TMV SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cc1c(sc[n+]1Cc2cnc(nc2N)C)CCOP(=O)(O)O[V](O)(O)(O)O" TMV SMILES "OpenEye OEToolkits" 1.9.2 "Cc1c(sc[n+]1Cc2cnc(nc2N)C)CCOP(=O)(O)O[V](O)(O)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TMV "SYSTEMATIC NAME" ACDLabs 12.01 "For multi-component charged structures, a total zero charge is required!" TMV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "[2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-1,3-thiazol-3-ium-5-yl]ethoxy-oxidanyl-phosphoryl]oxy-tetrakis(oxidanyl)vanadium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TMV "Create component" 2013-06-05 EBI TMV "Other modification" 2013-06-19 EBI TMV "Initial release" 2013-07-17 RCSB TMV "Modify descriptor" 2014-09-05 RCSB #