data_TN4 # _chem_comp.id TN4 _chem_comp.name ;(1R,2S,3S,4R)-4-hydroxy-2-methoxy-4-methyl-3-[(2R,3R)-2-methyl-3-(3-methylbut-2-en-1-yl)oxiran-2-yl]cyclohexyl (chloroacetyl)carbamate ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAD _chem_comp.formula "C19 H30 Cl N O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "TNP-470 (Open form)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-04-24 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 403.898 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TN4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1B6A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TN4 C1 C1 C 0 1 N N R N N N 18.391 29.209 18.975 -1.413 -1.415 -1.500 C1 TN4 1 TN4 C2 C2 C 0 1 N N S N N N 16.941 29.759 19.006 -1.261 -0.821 -0.099 C2 TN4 2 TN4 C3 C3 C 0 1 N N S N N N 15.989 28.621 19.447 -0.325 -1.703 0.730 C3 TN4 3 TN4 C4 C4 C 0 1 N N R N N N 16.403 28.123 20.853 1.045 -1.771 0.053 C4 TN4 4 TN4 CL4 CL4 CL 0 0 N N N N N N 14.144 32.690 25.918 7.310 2.163 -0.099 CL4 TN4 5 TN4 C5 C5 C 0 1 N N N N N N 17.855 27.625 20.876 0.893 -2.365 -1.349 C5 TN4 6 TN4 C6 C6 C 0 1 N N N N N N 18.808 28.698 20.355 -0.043 -1.482 -2.178 C6 TN4 7 TN4 C11 C11 C 0 1 N N N N N N 19.420 30.261 18.522 -2.349 -0.533 -2.329 C11 TN4 8 TN4 O11 O11 O 0 1 N N N N N N 18.473 28.177 18.098 -1.961 -2.731 -1.403 O11 TN4 9 TN4 C21 C21 C 0 1 N N R N N N 16.496 30.329 17.675 -2.631 -0.754 0.578 C21 TN4 10 TN4 C22 C22 C 0 1 N N R N N N 16.648 31.863 17.543 -3.267 0.625 0.765 C22 TN4 11 TN4 C23 C23 C 0 1 N N N N N N 16.841 32.395 16.141 -4.791 0.725 0.674 C23 TN4 12 TN4 C24 C24 C 0 1 N N N N N N 18.192 32.076 15.557 -5.205 2.172 0.762 C24 TN4 13 TN4 C25 C25 C 0 1 N N N N N N 19.361 32.717 15.552 -5.989 2.685 -0.154 C25 TN4 14 TN4 C2A C2A C 0 1 N N N N N N 16.103 29.455 16.512 -3.561 -1.939 0.314 C2A TN4 15 TN4 O2A O2A O 0 1 N N N N N N 15.432 31.303 17.844 -2.713 -0.116 1.854 O2A TN4 16 TN4 C2B C2B C 0 1 N N N N N N 20.663 32.068 15.143 -6.258 4.168 -0.169 C2B TN4 17 TN4 C2C C2C C 0 1 N N N N N N 19.533 34.054 16.263 -6.622 1.793 -1.190 C2C TN4 18 TN4 C31 C31 C 0 1 N N N N N N 13.701 28.052 19.506 0.057 -2.120 3.059 C31 TN4 19 TN4 O31 O31 O 0 1 N N N N N N 14.664 29.116 19.496 -0.183 -1.148 2.039 O31 TN4 20 TN4 C41 C41 C 0 1 N N N N N N 15.162 29.324 22.527 2.944 -0.326 -0.015 C41 TN4 21 TN4 O41 O41 O 0 1 N N N N N N 16.254 29.228 21.793 1.602 -0.433 -0.046 O41 TN4 22 TN4 N42 N42 N 0 1 N N N N N N 15.005 30.553 23.025 3.525 0.886 -0.102 N42 TN4 23 TN4 C43 C43 C 0 1 N N N N N N 14.004 30.980 23.816 4.868 0.994 -0.071 C43 TN4 24 TN4 C44 C44 C 0 1 N N N N N N 14.161 32.459 24.146 5.518 2.350 -0.169 C44 TN4 25 TN4 O4A O4A O 0 1 N N N N N N 14.463 28.346 22.732 3.630 -1.323 0.092 O4A TN4 26 TN4 O4B O4B O 0 1 N N N N N N 13.064 30.329 24.259 5.553 -0.001 0.036 O4B TN4 27 TN4 H2 H2 H 0 1 N N N N N N 16.911 30.593 19.723 -0.843 0.183 -0.173 H2 TN4 28 TN4 H3 H3 H 0 1 N N N N N N 16.048 27.789 18.730 -0.743 -2.707 0.804 H3 TN4 29 TN4 H4 H4 H 0 1 N N N N N N 15.757 27.277 21.132 1.712 -2.399 0.643 H4 TN4 30 TN4 H5 H5 H 0 1 N N N N N N 18.131 27.373 21.911 1.869 -2.413 -1.831 H5 TN4 31 TN4 H5A H5A H 0 1 N N N N N N 17.937 26.733 20.238 0.475 -3.368 -1.274 H5A TN4 32 TN4 H6 H6 H 0 1 N N N N N N 19.817 28.267 20.281 -0.151 -1.906 -3.176 H6 TN4 33 TN4 H6A H6A H 0 1 N N N N N N 18.806 29.543 21.059 0.375 -0.479 -2.252 H6A TN4 34 TN4 H11 H11 H 0 1 N N N N N N 19.391 31.122 19.206 -1.978 0.492 -2.328 H11 TN4 35 TN4 H11A H11A H 0 0 N N N N N N 20.427 29.818 18.534 -2.387 -0.905 -3.353 H11A TN4 36 TN4 H11B H11B H 0 0 N N N N N N 19.178 30.595 17.502 -3.349 -0.557 -1.897 H11B TN4 37 TN4 HO11 HO11 H 0 0 N N N N N N 17.851 27.502 18.343 -2.086 -3.170 -2.256 HO11 TN4 38 TN4 H22 H22 H 0 1 N N N N N N 17.281 32.637 18.003 -2.713 1.493 0.407 H22 TN4 39 TN4 H23 H23 H 0 1 N N N N N N 16.074 31.944 15.495 -5.127 0.308 -0.276 H23 TN4 40 TN4 H23A H23A H 0 0 N N N N N N 16.731 33.489 16.172 -5.242 0.168 1.495 H23A TN4 41 TN4 H24 H24 H 0 1 N N N N N N 18.220 31.132 15.033 -4.856 2.785 1.579 H24 TN4 42 TN4 H2A H2A H 0 1 N N N N N N 15.818 30.087 15.658 -3.041 -2.869 0.545 H2A TN4 43 TN4 H2AA H2AA H 0 0 N N N N N N 16.953 28.817 16.229 -4.448 -1.854 0.942 H2AA TN4 44 TN4 H2AB H2AB H 0 0 N N N N N N 15.250 28.823 16.800 -3.859 -1.941 -0.735 H2AB TN4 45 TN4 H2B H2B H 0 1 N N N N N N 21.480 32.800 15.224 -5.512 4.666 -0.789 H2B TN4 46 TN4 H2BA H2BA H 0 0 N N N N N N 20.870 31.214 15.804 -7.252 4.353 -0.578 H2BA TN4 47 TN4 H2BB H2BB H 0 0 N N N N N N 20.587 31.717 14.103 -6.205 4.558 0.847 H2BB TN4 48 TN4 H2C H2C H 0 1 N N N N N N 20.567 34.407 16.136 -6.383 0.753 -0.970 H2C TN4 49 TN4 H2CA H2CA H 0 0 N N N N N N 18.839 34.790 15.832 -7.704 1.929 -1.175 H2CA TN4 50 TN4 H2CB H2CB H 0 0 N N N N N N 19.317 33.930 17.334 -6.237 2.053 -2.177 H2CB TN4 51 TN4 H31 H31 H 0 1 N N N N N N 12.686 28.475 19.544 0.154 -1.619 4.023 H31 TN4 52 TN4 H31A H31A H 0 0 N N N N N N 13.812 27.449 18.593 -0.776 -2.822 3.096 H31A TN4 53 TN4 H31B H31B H 0 0 N N N N N N 13.866 27.416 20.388 0.978 -2.660 2.837 H31B TN4 54 TN4 HN42 HN42 H 0 0 N N N N N N 15.704 31.226 22.785 2.977 1.682 -0.188 HN42 TN4 55 TN4 H44 H44 H 0 1 N N N N N N 13.330 33.023 23.697 5.185 2.973 0.661 H44 TN4 56 TN4 H44A H44A H 0 0 N N N N N N 15.116 32.824 23.740 5.239 2.819 -1.112 H44A TN4 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TN4 O11 C1 SING N N 1 TN4 C11 C1 SING N N 2 TN4 C1 C2 SING N N 3 TN4 C1 C6 SING N N 4 TN4 C21 C2 SING N N 5 TN4 C2 C3 SING N N 6 TN4 C2 H2 SING N N 7 TN4 C3 O31 SING N N 8 TN4 C3 C4 SING N N 9 TN4 C3 H3 SING N N 10 TN4 C4 C5 SING N N 11 TN4 C4 O41 SING N N 12 TN4 C4 H4 SING N N 13 TN4 C44 CL4 SING N N 14 TN4 C6 C5 SING N N 15 TN4 C5 H5 SING N N 16 TN4 C5 H5A SING N N 17 TN4 C6 H6 SING N N 18 TN4 C6 H6A SING N N 19 TN4 C11 H11 SING N N 20 TN4 C11 H11A SING N N 21 TN4 C11 H11B SING N N 22 TN4 O11 HO11 SING N N 23 TN4 C2A C21 SING N N 24 TN4 C22 C21 SING N N 25 TN4 C21 O2A SING N N 26 TN4 C23 C22 SING N N 27 TN4 C22 O2A SING N N 28 TN4 C22 H22 SING N N 29 TN4 C24 C23 SING N N 30 TN4 C23 H23 SING N N 31 TN4 C23 H23A SING N N 32 TN4 C25 C24 DOUB N N 33 TN4 C24 H24 SING N N 34 TN4 C2B C25 SING N N 35 TN4 C25 C2C SING N N 36 TN4 C2A H2A SING N N 37 TN4 C2A H2AA SING N N 38 TN4 C2A H2AB SING N N 39 TN4 C2B H2B SING N N 40 TN4 C2B H2BA SING N N 41 TN4 C2B H2BB SING N N 42 TN4 C2C H2C SING N N 43 TN4 C2C H2CA SING N N 44 TN4 C2C H2CB SING N N 45 TN4 O31 C31 SING N N 46 TN4 C31 H31 SING N N 47 TN4 C31 H31A SING N N 48 TN4 C31 H31B SING N N 49 TN4 O41 C41 SING N N 50 TN4 C41 O4A DOUB N N 51 TN4 C41 N42 SING N N 52 TN4 N42 C43 SING N N 53 TN4 N42 HN42 SING N N 54 TN4 C43 C44 SING N N 55 TN4 C43 O4B DOUB N N 56 TN4 C44 H44 SING N N 57 TN4 C44 H44A SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TN4 SMILES ACDLabs 12.01 "ClCC(=O)NC(=O)OC2CCC(O)(C(C1(OC1C/C=C(/C)C)C)C2OC)C" TN4 InChI InChI 1.03 "InChI=1S/C19H30ClNO6/c1-11(2)6-7-13-19(4,27-13)16-15(25-5)12(8-9-18(16,3)24)26-17(23)21-14(22)10-20/h6,12-13,15-16,24H,7-10H2,1-5H3,(H,21,22,23)/t12-,13-,15-,16+,18-,19+/m1/s1" TN4 InChIKey InChI 1.03 OUUSPVSSNHLIGE-AGYLCKTBSA-N TN4 SMILES_CANONICAL CACTVS 3.370 "CO[C@@H]1[C@@H](CC[C@@](C)(O)[C@H]1[C@@]2(C)O[C@@H]2CC=C(C)C)OC(=O)NC(=O)CCl" TN4 SMILES CACTVS 3.370 "CO[CH]1[CH](CC[C](C)(O)[CH]1[C]2(C)O[CH]2CC=C(C)C)OC(=O)NC(=O)CCl" TN4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CC(=CC[C@@H]1C(O1)(C)[C@H]2[C@@H]([C@@H](CC[C@@]2(C)O)OC(=O)NC(=O)CCl)OC)C" TN4 SMILES "OpenEye OEToolkits" 1.7.2 "CC(=CCC1C(O1)(C)C2C(C(CCC2(C)O)OC(=O)NC(=O)CCl)OC)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TN4 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,3S,4R)-4-hydroxy-2-methoxy-4-methyl-3-[(2R,3R)-2-methyl-3-(3-methylbut-2-en-1-yl)oxiran-2-yl]cyclohexyl (chloroacetyl)carbamate" TN4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "[(1R,2S,3S,4R)-2-methoxy-4-methyl-3-[(3R)-2-methyl-3-(3-methylbut-2-enyl)oxiran-2-yl]-4-oxidanyl-cyclohexyl] N-(2-chloranylethanoyl)carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TN4 "Create component" 2003-04-24 EBI TN4 "Modify descriptor" 2011-06-04 RCSB TN4 "Other modification" 2011-08-23 RCSB TN4 "Modify synonyms" 2020-06-05 PDBE TN4 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id TN4 _pdbx_chem_comp_synonyms.name "TNP-470 (Open form)" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id TN4 _pdbx_chem_comp_pcm.modified_residue_id HIS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C11 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NE2 _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #