data_TNV
#

_chem_comp.id                                   TNV
_chem_comp.name                                 "[2-(6-AMINO-9H-PURIN-9-YL)-1-METHYLETHOXY]METHYL-TRIPHOSPHATE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C9 H16 N5 O10 P3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        TENOFOVIR-DIPHOSPHATE
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-04-21
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       447.172
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    TNV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1T05
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TNV  PA      PA      P  0  1  N  N  S  70.122  57.567  -63.971   1.525  -0.296   0.204  PA      TNV   1  
TNV  O1A     O1A     O  0  1  N  N  N  71.173  56.546  -63.481   0.850   0.974   0.548  O1A     TNV   2  
TNV  O2A     O2A     O  0  1  N  N  N  69.998  58.732  -62.957   0.506  -1.522   0.425  O2A     TNV   3  
TNV  O3A     O3A     O  0  1  N  N  N  70.582  58.132  -65.326   1.990  -0.256  -1.336  O3A     TNV   4  
TNV  PB      PB      P  0  1  N  N  S  71.071  57.146  -66.478   0.658  -0.059  -2.219  PB      TNV   5  
TNV  O1B     O1B     O  0  1  N  N  N  70.185  57.359  -67.751  -0.003   1.208  -1.837  O1B     TNV   6  
TNV  O2B     O2B     O  0  1  N  N  N  70.935  55.704  -65.955  -0.346  -1.289  -1.957  O2B     TNV   7  
TNV  O3B     O3B     O  0  1  N  N  N  72.580  57.431  -66.864   1.051  -0.010  -3.780  O3B     TNV   8  
TNV  PG      PG      P  0  1  N  N  N  73.773  57.275  -65.801  -0.320   0.187  -4.599  PG      TNV   9  
TNV  O1G     O1G     O  0  1  N  N  N  73.828  55.888  -65.320  -0.966   1.451  -4.181  O1G     TNV  10  
TNV  O2G     O2G     O  0  1  N  N  N  75.069  57.600  -66.468   0.000   0.245  -6.176  O2G     TNV  11  
TNV  O3G     O3G     O  0  1  N  N  N  73.552  58.228  -64.575  -1.308  -1.046  -4.297  O3G     TNV  12  
TNV  "C9'"   "C9'"   C  0  1  N  N  N  68.547  56.744  -64.065   2.985  -0.518   1.273  "C9'"   TNV  13  
TNV  "O9'"   "O9'"   O  0  1  N  N  N  68.108  56.744  -65.359   2.561  -0.686   2.628  "O9'"   TNV  14  
TNV  "C8'"   "C8'"   C  0  1  N  N  N  67.476  58.854  -66.358   3.474   1.289   3.680  "C8'"   TNV  15  
TNV  "C7'"   "C7'"   C  0  1  N  N  R  66.963  57.574  -65.653   2.222   0.612   3.118  "C7'"   TNV  16  
TNV  "C6'"   "C6'"   C  0  1  N  N  N  66.032  57.890  -64.389   1.173   0.481   4.224  "C6'"   TNV  17  
TNV  N9      N9      N  0  1  Y  N  N  65.851  59.301  -64.139  -0.025  -0.166   3.687  N9      TNV  18  
TNV  C4      C4      C  0  1  Y  N  N  65.031  60.200  -64.787  -1.104   0.463   3.120  C4      TNV  19  
TNV  N3      N3      N  0  1  Y  N  N  64.196  59.926  -65.827  -1.424   1.728   2.865  N3      TNV  20  
TNV  C2      C2      C  0  1  Y  N  N  63.544  61.048  -66.237  -2.568   2.026   2.285  C2      TNV  21  
TNV  N1      N1      N  0  1  Y  N  N  63.647  62.329  -65.742  -3.442   1.104   1.926  N1      TNV  22  
TNV  C6      C6      C  0  1  Y  N  N  64.498  62.573  -64.691  -3.207  -0.186   2.136  C6      TNV  23  
TNV  N6      N6      N  0  1  N  N  N  64.574  63.823  -64.244  -4.129  -1.145   1.757  N6      TNV  24  
TNV  C5      C5      C  0  1  Y  N  N  65.249  61.449  -64.157  -1.999  -0.555   2.752  C5      TNV  25  
TNV  N7      N7      N  0  1  Y  N  N  66.184  61.313  -63.123  -1.434  -1.732   3.114  N7      TNV  26  
TNV  C8      C8      C  0  1  Y  N  N  66.509  60.022  -63.154  -0.276  -1.506   3.663  C8      TNV  27  
TNV  H2A     H2A     H  0  1  N  N  N  69.351  59.359  -63.258   1.008  -2.334   0.270  H2A     TNV  28  
TNV  H2B     H2B     H  0  1  N  N  N  71.226  55.116  -66.641   0.122  -2.093  -2.218  H2B     TNV  29  
TNV  H2G     H2G     H  0  1  N  N  N  75.774  57.507  -65.839  -0.845   0.364  -6.629  H2G     TNV  30  
TNV  H3G     H3G     H  0  1  N  N  N  74.257  58.135  -63.946  -0.849  -1.848  -4.584  H3G     TNV  31  
TNV  "H9'1"  "1H9'"  H  0  0  N  N  N  68.582  55.717  -63.632   3.626   0.359   1.199  "H9'1"  TNV  32  
TNV  "H9'2"  "2H9'"  H  0  0  N  N  N  67.798  57.186  -63.366   3.538  -1.401   0.954  "H9'2"  TNV  33  
TNV  "H8'1"  "1H8'"  H  0  0  N  N  N  66.592  59.494  -66.584   3.920   0.651   4.443  "H8'1"  TNV  34  
TNV  "H8'2"  "2H8'"  H  0  0  N  N  N  68.258  59.388  -65.770   4.191   1.450   2.875  "H8'2"  TNV  35  
TNV  "H8'3"  "3H8'"  H  0  0  N  N  N  68.093  58.633  -67.259   3.201   2.248   4.121  "H8'3"  TNV  36  
TNV  "H7'"   "H7'"   H  0  1  N  N  N  66.280  57.008  -66.329   1.818   1.214   2.304  "H7'"   TNV  37  
TNV  "H6'1"  "1H6'"  H  0  0  N  N  N  65.046  57.378  -64.489   1.577  -0.120   5.039  "H6'1"  TNV  38  
TNV  "H6'2"  "2H6'"  H  0  0  N  N  N  66.417  57.375  -63.478   0.914   1.471   4.598  "H6'2"  TNV  39  
TNV  H2      H2      H  0  1  N  N  N  62.843  60.900  -67.076  -2.799   3.064   2.095  H2      TNV  40  
TNV  HN61    1HN6    H  0  0  N  N  N  65.205  64.004  -63.463  -4.960  -0.878   1.332  HN61    TNV  41  
TNV  HN62    2HN6    H  0  0  N  N  N  63.639  64.154  -64.006  -3.946  -2.084   1.916  HN62    TNV  42  
TNV  H8      H8      H  0  1  N  N  N  67.239  59.598  -62.444   0.388  -2.268   4.043  H8      TNV  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TNV  PA     O1A     DOUB  N  N   1  
TNV  PA     O2A     SING  N  N   2  
TNV  PA     O3A     SING  N  N   3  
TNV  PA     "C9'"   SING  N  N   4  
TNV  O2A    H2A     SING  N  N   5  
TNV  O3A    PB      SING  N  N   6  
TNV  PB     O1B     DOUB  N  N   7  
TNV  PB     O2B     SING  N  N   8  
TNV  PB     O3B     SING  N  N   9  
TNV  O2B    H2B     SING  N  N  10  
TNV  O3B    PG      SING  N  N  11  
TNV  PG     O1G     DOUB  N  N  12  
TNV  PG     O2G     SING  N  N  13  
TNV  PG     O3G     SING  N  N  14  
TNV  O2G    H2G     SING  N  N  15  
TNV  O3G    H3G     SING  N  N  16  
TNV  "C9'"  "O9'"   SING  N  N  17  
TNV  "C9'"  "H9'1"  SING  N  N  18  
TNV  "C9'"  "H9'2"  SING  N  N  19  
TNV  "O9'"  "C7'"   SING  N  N  20  
TNV  "C8'"  "C7'"   SING  N  N  21  
TNV  "C8'"  "H8'1"  SING  N  N  22  
TNV  "C8'"  "H8'2"  SING  N  N  23  
TNV  "C8'"  "H8'3"  SING  N  N  24  
TNV  "C7'"  "C6'"   SING  N  N  25  
TNV  "C7'"  "H7'"   SING  N  N  26  
TNV  "C6'"  N9      SING  N  N  27  
TNV  "C6'"  "H6'1"  SING  N  N  28  
TNV  "C6'"  "H6'2"  SING  N  N  29  
TNV  N9     C4      SING  Y  N  30  
TNV  N9     C8      SING  Y  N  31  
TNV  C4     N3      SING  Y  N  32  
TNV  C4     C5      DOUB  Y  N  33  
TNV  N3     C2      DOUB  Y  N  34  
TNV  C2     N1      SING  Y  N  35  
TNV  C2     H2      SING  N  N  36  
TNV  N1     C6      DOUB  Y  N  37  
TNV  C6     N6      SING  N  N  38  
TNV  C6     C5      SING  Y  N  39  
TNV  N6     HN61    SING  N  N  40  
TNV  N6     HN62    SING  N  N  41  
TNV  C5     N7      SING  Y  N  42  
TNV  N7     C8      DOUB  Y  N  43  
TNV  C8     H8      SING  N  N  44  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TNV  SMILES_CANONICAL  CACTVS                3.341  "C[C@H](Cn1cnc2c(N)ncnc12)OC[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O"  
TNV  SMILES            CACTVS                3.341  "C[CH](Cn1cnc2c(N)ncnc12)OC[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O"  
TNV  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@H](Cn1cnc2c1ncnc2N)OC[P@](=O)(O)O[P@](=O)(O)OP(=O)(O)O"  
TNV  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(Cn1cnc2c1ncnc2N)OCP(=O)(O)OP(=O)(O)OP(=O)(O)O"  
TNV  InChI             InChI                 1.03   "InChI=1S/C9H16N5O10P3/c1-6(2-14-4-13-7-8(10)11-3-12-9(7)14)22-5-25(15,16)23-27(20,21)24-26(17,18)19/h3-4,6H,2,5H2,1H3,(H,15,16)(H,20,21)(H2,10,11,12)(H2,17,18,19)/t6-/m1/s1"  
TNV  InChIKey          InChI                 1.03   IACQCQDWSIQSRP-ZCFIWIBFSA-N  
#
_pdbx_chem_comp_identifier.comp_id          TNV
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  1.5.0
_pdbx_chem_comp_identifier.identifier       "[(2R)-1-(6-aminopurin-9-yl)propan-2-yl]oxymethyl-(hydroxy-phosphonooxy-phosphoryl)oxy-phosphinic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TNV  "Create component"   2004-04-21  EBI   
TNV  "Modify descriptor"  2011-06-04  RCSB  
TNV  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     TNV
_pdbx_chem_comp_synonyms.name        TENOFOVIR-DIPHOSPHATE
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##