data_TNV # _chem_comp.id TNV _chem_comp.name "[2-(6-AMINO-9H-PURIN-9-YL)-1-METHYLETHOXY]METHYL-TRIPHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H16 N5 O10 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms TENOFOVIR-DIPHOSPHATE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-04-21 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 447.172 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TNV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1T05 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TNV PA PA P 0 1 N N S 70.122 57.567 -63.971 1.525 -0.296 0.204 PA TNV 1 TNV O1A O1A O 0 1 N N N 71.173 56.546 -63.481 0.850 0.974 0.548 O1A TNV 2 TNV O2A O2A O 0 1 N N N 69.998 58.732 -62.957 0.506 -1.522 0.425 O2A TNV 3 TNV O3A O3A O 0 1 N N N 70.582 58.132 -65.326 1.990 -0.256 -1.336 O3A TNV 4 TNV PB PB P 0 1 N N S 71.071 57.146 -66.478 0.658 -0.059 -2.219 PB TNV 5 TNV O1B O1B O 0 1 N N N 70.185 57.359 -67.751 -0.003 1.208 -1.837 O1B TNV 6 TNV O2B O2B O 0 1 N N N 70.935 55.704 -65.955 -0.346 -1.289 -1.957 O2B TNV 7 TNV O3B O3B O 0 1 N N N 72.580 57.431 -66.864 1.051 -0.010 -3.780 O3B TNV 8 TNV PG PG P 0 1 N N N 73.773 57.275 -65.801 -0.320 0.187 -4.599 PG TNV 9 TNV O1G O1G O 0 1 N N N 73.828 55.888 -65.320 -0.966 1.451 -4.181 O1G TNV 10 TNV O2G O2G O 0 1 N N N 75.069 57.600 -66.468 0.000 0.245 -6.176 O2G TNV 11 TNV O3G O3G O 0 1 N N N 73.552 58.228 -64.575 -1.308 -1.046 -4.297 O3G TNV 12 TNV "C9'" "C9'" C 0 1 N N N 68.547 56.744 -64.065 2.985 -0.518 1.273 "C9'" TNV 13 TNV "O9'" "O9'" O 0 1 N N N 68.108 56.744 -65.359 2.561 -0.686 2.628 "O9'" TNV 14 TNV "C8'" "C8'" C 0 1 N N N 67.476 58.854 -66.358 3.474 1.289 3.680 "C8'" TNV 15 TNV "C7'" "C7'" C 0 1 N N R 66.963 57.574 -65.653 2.222 0.612 3.118 "C7'" TNV 16 TNV "C6'" "C6'" C 0 1 N N N 66.032 57.890 -64.389 1.173 0.481 4.224 "C6'" TNV 17 TNV N9 N9 N 0 1 Y N N 65.851 59.301 -64.139 -0.025 -0.166 3.687 N9 TNV 18 TNV C4 C4 C 0 1 Y N N 65.031 60.200 -64.787 -1.104 0.463 3.120 C4 TNV 19 TNV N3 N3 N 0 1 Y N N 64.196 59.926 -65.827 -1.424 1.728 2.865 N3 TNV 20 TNV C2 C2 C 0 1 Y N N 63.544 61.048 -66.237 -2.568 2.026 2.285 C2 TNV 21 TNV N1 N1 N 0 1 Y N N 63.647 62.329 -65.742 -3.442 1.104 1.926 N1 TNV 22 TNV C6 C6 C 0 1 Y N N 64.498 62.573 -64.691 -3.207 -0.186 2.136 C6 TNV 23 TNV N6 N6 N 0 1 N N N 64.574 63.823 -64.244 -4.129 -1.145 1.757 N6 TNV 24 TNV C5 C5 C 0 1 Y N N 65.249 61.449 -64.157 -1.999 -0.555 2.752 C5 TNV 25 TNV N7 N7 N 0 1 Y N N 66.184 61.313 -63.123 -1.434 -1.732 3.114 N7 TNV 26 TNV C8 C8 C 0 1 Y N N 66.509 60.022 -63.154 -0.276 -1.506 3.663 C8 TNV 27 TNV H2A H2A H 0 1 N N N 69.351 59.359 -63.258 1.008 -2.334 0.270 H2A TNV 28 TNV H2B H2B H 0 1 N N N 71.226 55.116 -66.641 0.122 -2.093 -2.218 H2B TNV 29 TNV H2G H2G H 0 1 N N N 75.774 57.507 -65.839 -0.845 0.364 -6.629 H2G TNV 30 TNV H3G H3G H 0 1 N N N 74.257 58.135 -63.946 -0.849 -1.848 -4.584 H3G TNV 31 TNV "H9'1" "1H9'" H 0 0 N N N 68.582 55.717 -63.632 3.626 0.359 1.199 "H9'1" TNV 32 TNV "H9'2" "2H9'" H 0 0 N N N 67.798 57.186 -63.366 3.538 -1.401 0.954 "H9'2" TNV 33 TNV "H8'1" "1H8'" H 0 0 N N N 66.592 59.494 -66.584 3.920 0.651 4.443 "H8'1" TNV 34 TNV "H8'2" "2H8'" H 0 0 N N N 68.258 59.388 -65.770 4.191 1.450 2.875 "H8'2" TNV 35 TNV "H8'3" "3H8'" H 0 0 N N N 68.093 58.633 -67.259 3.201 2.248 4.121 "H8'3" TNV 36 TNV "H7'" "H7'" H 0 1 N N N 66.280 57.008 -66.329 1.818 1.214 2.304 "H7'" TNV 37 TNV "H6'1" "1H6'" H 0 0 N N N 65.046 57.378 -64.489 1.577 -0.120 5.039 "H6'1" TNV 38 TNV "H6'2" "2H6'" H 0 0 N N N 66.417 57.375 -63.478 0.914 1.471 4.598 "H6'2" TNV 39 TNV H2 H2 H 0 1 N N N 62.843 60.900 -67.076 -2.799 3.064 2.095 H2 TNV 40 TNV HN61 1HN6 H 0 0 N N N 65.205 64.004 -63.463 -4.960 -0.878 1.332 HN61 TNV 41 TNV HN62 2HN6 H 0 0 N N N 63.639 64.154 -64.006 -3.946 -2.084 1.916 HN62 TNV 42 TNV H8 H8 H 0 1 N N N 67.239 59.598 -62.444 0.388 -2.268 4.043 H8 TNV 43 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TNV PA O1A DOUB N N 1 TNV PA O2A SING N N 2 TNV PA O3A SING N N 3 TNV PA "C9'" SING N N 4 TNV O2A H2A SING N N 5 TNV O3A PB SING N N 6 TNV PB O1B DOUB N N 7 TNV PB O2B SING N N 8 TNV PB O3B SING N N 9 TNV O2B H2B SING N N 10 TNV O3B PG SING N N 11 TNV PG O1G DOUB N N 12 TNV PG O2G SING N N 13 TNV PG O3G SING N N 14 TNV O2G H2G SING N N 15 TNV O3G H3G SING N N 16 TNV "C9'" "O9'" SING N N 17 TNV "C9'" "H9'1" SING N N 18 TNV "C9'" "H9'2" SING N N 19 TNV "O9'" "C7'" SING N N 20 TNV "C8'" "C7'" SING N N 21 TNV "C8'" "H8'1" SING N N 22 TNV "C8'" "H8'2" SING N N 23 TNV "C8'" "H8'3" SING N N 24 TNV "C7'" "C6'" SING N N 25 TNV "C7'" "H7'" SING N N 26 TNV "C6'" N9 SING N N 27 TNV "C6'" "H6'1" SING N N 28 TNV "C6'" "H6'2" SING N N 29 TNV N9 C4 SING Y N 30 TNV N9 C8 SING Y N 31 TNV C4 N3 SING Y N 32 TNV C4 C5 DOUB Y N 33 TNV N3 C2 DOUB Y N 34 TNV C2 N1 SING Y N 35 TNV C2 H2 SING N N 36 TNV N1 C6 DOUB Y N 37 TNV C6 N6 SING N N 38 TNV C6 C5 SING Y N 39 TNV N6 HN61 SING N N 40 TNV N6 HN62 SING N N 41 TNV C5 N7 SING Y N 42 TNV N7 C8 DOUB Y N 43 TNV C8 H8 SING N N 44 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TNV SMILES_CANONICAL CACTVS 3.341 "C[C@H](Cn1cnc2c(N)ncnc12)OC[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O" TNV SMILES CACTVS 3.341 "C[CH](Cn1cnc2c(N)ncnc12)OC[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O" TNV SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H](Cn1cnc2c1ncnc2N)OC[P@](=O)(O)O[P@](=O)(O)OP(=O)(O)O" TNV SMILES "OpenEye OEToolkits" 1.5.0 "CC(Cn1cnc2c1ncnc2N)OCP(=O)(O)OP(=O)(O)OP(=O)(O)O" TNV InChI InChI 1.03 "InChI=1S/C9H16N5O10P3/c1-6(2-14-4-13-7-8(10)11-3-12-9(7)14)22-5-25(15,16)23-27(20,21)24-26(17,18)19/h3-4,6H,2,5H2,1H3,(H,15,16)(H,20,21)(H2,10,11,12)(H2,17,18,19)/t6-/m1/s1" TNV InChIKey InChI 1.03 IACQCQDWSIQSRP-ZCFIWIBFSA-N # _pdbx_chem_comp_identifier.comp_id TNV _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 1.5.0 _pdbx_chem_comp_identifier.identifier "[(2R)-1-(6-aminopurin-9-yl)propan-2-yl]oxymethyl-(hydroxy-phosphonooxy-phosphoryl)oxy-phosphinic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TNV "Create component" 2004-04-21 EBI TNV "Modify descriptor" 2011-06-04 RCSB TNV "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id TNV _pdbx_chem_comp_synonyms.name TENOFOVIR-DIPHOSPHATE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##