data_TO9
#
_chem_comp.id TO9
_chem_comp.name "(2~{R})-3-[3,4-bis(oxidanyl)phenyl]-2-oxidanyl-propanoic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C9 H10 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms Danshensu
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-04-28
_chem_comp.pdbx_modified_date 2024-01-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 198.173
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code TO9
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8J4H
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TO9 O3 O1 O 0 1 N N N N N N 49.991 -8.816 -20.809 -3.797 -1.502 -0.229 O3 TO9 1
TO9 C2 C1 C 0 1 N N N N N N 49.983 -7.659 -21.276 -3.431 -0.263 0.134 C2 TO9 2
TO9 O2 O2 O 0 1 N N N N N N 50.961 -6.901 -21.194 -4.262 0.608 0.236 O2 TO9 3
TO9 C1 C2 C 0 1 N N R N N N 48.742 -7.182 -21.957 -1.982 0.042 0.415 C1 TO9 4
TO9 O1 O3 O 0 1 N N N N N N 48.904 -6.119 -22.906 -1.861 1.384 0.892 O1 TO9 5
TO9 C3 C3 C 0 1 N N N N N N 47.728 -6.657 -21.010 -1.168 -0.117 -0.871 C3 TO9 6
TO9 C4 C4 C 0 1 Y N N N N N 46.885 -7.593 -20.206 0.296 0.067 -0.565 C4 TO9 7
TO9 C9 C5 C 0 1 Y N N N N N 45.752 -8.148 -20.706 0.860 1.327 -0.632 C9 TO9 8
TO9 C8 C6 C 0 1 Y N N N N N 44.864 -8.950 -20.032 2.204 1.502 -0.353 C8 TO9 9
TO9 C7 C7 C 0 1 Y N N N N N 45.182 -9.223 -18.742 2.986 0.412 -0.006 C7 TO9 10
TO9 O5 O4 O 0 1 N N N N N N 44.404 -9.998 -17.975 4.307 0.582 0.269 O5 TO9 11
TO9 C6 C8 C 0 1 Y N N N N N 46.398 -8.660 -18.164 2.417 -0.856 0.062 C6 TO9 12
TO9 O4 O5 O 0 1 N N N N N N 46.701 -8.937 -16.868 3.181 -1.929 0.402 O4 TO9 13
TO9 C5 C9 C 0 1 Y N N N N N 47.206 -7.853 -18.926 1.070 -1.023 -0.214 C5 TO9 14
TO9 H1 H1 H 0 1 N N N N N N 50.834 -8.990 -20.407 -4.738 -1.649 -0.398 H1 TO9 15
TO9 H2 H2 H 0 1 N N N N N N 48.298 -8.044 -22.477 -1.605 -0.647 1.171 H2 TO9 16
TO9 H3 H3 H 0 1 N N N N N N 49.783 -5.765 -22.838 -2.178 2.053 0.269 H3 TO9 17
TO9 H4 H4 H 0 1 N N N N N N 48.267 -6.022 -20.291 -1.331 -1.113 -1.282 H4 TO9 18
TO9 H5 H5 H 0 1 N N N N N N 47.036 -6.038 -21.600 -1.485 0.632 -1.597 H5 TO9 19
TO9 H6 H6 H 0 1 N N N N N N 45.525 -7.937 -21.741 0.251 2.177 -0.902 H6 TO9 20
TO9 H7 H7 H 0 1 N N N N N N 43.971 -9.338 -20.499 2.642 2.487 -0.406 H7 TO9 21
TO9 H8 H8 H 0 1 N N N N N N 44.787 -10.074 -17.109 4.495 0.763 1.201 H8 TO9 22
TO9 H9 H9 H 0 1 N N N N N N 46.035 -9.506 -16.501 3.208 -2.106 1.352 H9 TO9 23
TO9 H10 H10 H 0 1 N N N N N N 48.101 -7.426 -18.497 0.625 -2.006 -0.159 H10 TO9 24
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TO9 O1 C1 SING N N 1
TO9 C1 C2 SING N N 2
TO9 C1 C3 SING N N 3
TO9 C2 O2 DOUB N N 4
TO9 C2 O3 SING N N 5
TO9 C3 C4 SING N N 6
TO9 C9 C4 DOUB Y N 7
TO9 C9 C8 SING Y N 8
TO9 C4 C5 SING Y N 9
TO9 C8 C7 DOUB Y N 10
TO9 C5 C6 DOUB Y N 11
TO9 C7 C6 SING Y N 12
TO9 C7 O5 SING N N 13
TO9 C6 O4 SING N N 14
TO9 O3 H1 SING N N 15
TO9 C1 H2 SING N N 16
TO9 O1 H3 SING N N 17
TO9 C3 H4 SING N N 18
TO9 C3 H5 SING N N 19
TO9 C9 H6 SING N N 20
TO9 C8 H7 SING N N 21
TO9 O5 H8 SING N N 22
TO9 O4 H9 SING N N 23
TO9 C5 H10 SING N N 24
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TO9 InChI InChI 1.06 "InChI=1S/C9H10O5/c10-6-2-1-5(3-7(6)11)4-8(12)9(13)14/h1-3,8,10-12H,4H2,(H,13,14)/t8-/m1/s1"
TO9 InChIKey InChI 1.06 PAFLSMZLRSPALU-MRVPVSSYSA-N
TO9 SMILES_CANONICAL CACTVS 3.385 "O[C@H](Cc1ccc(O)c(O)c1)C(O)=O"
TO9 SMILES CACTVS 3.385 "O[CH](Cc1ccc(O)c(O)c1)C(O)=O"
TO9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C[C@H](C(=O)O)O)O)O"
TO9 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1CC(C(=O)O)O)O)O"
#
_pdbx_chem_comp_identifier.comp_id TO9
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(2~{R})-3-[3,4-bis(oxidanyl)phenyl]-2-oxidanyl-propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TO9 "Create component" 2023-04-28 PDBJ
TO9 "Modify synonyms" 2023-04-29 PDBJ
TO9 "Initial release" 2024-01-10 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id TO9
_pdbx_chem_comp_synonyms.name Danshensu
_pdbx_chem_comp_synonyms.provenance PUBCHEM
_pdbx_chem_comp_synonyms.type ?
#