data_TP4
#
_chem_comp.id TP4
_chem_comp.name "N-[4-[[GLUTAMIC ACID]-CARBONYL]-BENZENE-SULFONYL-D-PROLINYL]-3-AMINO-PROPANOIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H25 N3 O10 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms SP-876
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2000-06-13
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 499.492
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code TP4
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1F4G
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TP4 C1 C1 C 0 1 N N N 15.862 13.779 30.158 3.477 -1.848 -3.155 C1 TP4 1
TP4 C2 C2 C 0 1 N N N 16.992 13.970 31.185 3.519 -0.309 -2.984 C2 TP4 2
TP4 N3 N3 N 0 1 N N N 16.837 15.384 31.564 2.110 0.087 -2.784 N3 TP4 3
TP4 C4 C4 C 0 1 N N R 15.829 16.088 30.734 1.246 -0.938 -3.386 C4 TP4 4
TP4 C5 C5 C 0 1 N N N 15.759 15.163 29.493 2.165 -2.037 -3.960 C5 TP4 5
TP4 C6 C6 C 0 1 N N N 16.161 17.586 30.422 0.422 -0.330 -4.492 C6 TP4 6
TP4 O7 O7 O 0 1 N N N 17.360 17.892 30.370 0.818 0.659 -5.069 O7 TP4 7
TP4 N8 N8 N 0 1 N N N 15.201 18.494 30.184 -0.755 -0.886 -4.838 N8 TP4 8
TP4 S9 S9 S 0 1 N N N 17.096 15.863 33.193 1.594 1.460 -2.015 S9 TP4 9
TP4 C10 C10 C 0 1 Y N N 16.053 15.027 34.330 1.481 1.090 -0.296 C10 TP4 10
TP4 O11 O11 O 0 1 N N N 18.605 15.642 33.564 2.656 2.395 -2.140 O11 TP4 11
TP4 O12 O12 O 0 1 N N N 16.669 17.375 33.268 0.258 1.669 -2.454 O12 TP4 12
TP4 C13 C13 C 0 1 Y N N 14.699 15.139 34.075 2.556 1.347 0.534 C13 TP4 13
TP4 C14 C14 C 0 1 Y N N 13.823 14.548 34.970 2.474 1.060 1.881 C14 TP4 14
TP4 C15 C15 C 0 1 Y N N 14.338 13.884 36.104 1.303 0.510 2.405 C15 TP4 15
TP4 C16 C16 C 0 1 Y N N 15.717 13.799 36.329 0.222 0.253 1.560 C16 TP4 16
TP4 C17 C17 C 0 1 Y N N 16.605 14.386 35.431 0.315 0.549 0.216 C17 TP4 17
TP4 C18 C18 C 0 1 N N N 13.349 13.227 37.048 1.209 0.199 3.847 C18 TP4 18
TP4 N19 N19 N 0 1 N N N 13.821 12.721 38.201 0.077 -0.332 4.349 N19 TP4 19
TP4 C20 C20 C 0 1 N N S 12.847 12.033 39.131 -0.016 -0.639 5.778 C20 TP4 20
TP4 C21 C21 C 0 1 N N N 13.106 10.513 39.251 -1.470 -0.501 6.235 C21 TP4 21
TP4 C22 C22 C 0 1 N N N 14.019 9.895 38.172 -1.948 0.930 5.989 C22 TP4 22
TP4 C23 C23 C 0 1 N N N 14.672 8.631 38.746 -3.380 1.066 6.440 C23 TP4 23
TP4 O24 O24 O 0 1 N N N 12.181 13.039 36.677 2.152 0.424 4.580 O24 TP4 24
TP4 C25 C25 C 0 1 N N N 13.043 12.798 40.488 0.454 -2.050 6.021 C25 TP4 25
TP4 O26 O26 O 0 1 N N N 12.132 12.746 41.315 0.969 -2.342 7.074 O26 TP4 26
TP4 O27 O27 O 0 1 N N N 14.140 13.379 40.625 0.301 -2.982 5.066 O27 TP4 27
TP4 O28 O28 O 0 1 N N N 15.184 8.640 39.887 -4.012 2.244 6.319 O28 TP4 28
TP4 O29 O29 O 0 1 N N N 14.683 7.593 38.058 -3.958 0.115 6.909 O29 TP4 29
TP4 C30 C30 C 0 1 N N N 15.270 19.948 30.037 -1.556 -0.295 -5.913 C30 TP4 30
TP4 C31 C31 C 0 1 N N N 15.090 20.627 31.412 -2.835 -1.113 -6.104 C31 TP4 31
TP4 C32 C32 C 0 1 N N N 15.430 22.125 31.254 -3.659 -0.504 -7.210 C32 TP4 32
TP4 O33 O33 O 0 1 N N N 14.532 22.956 31.502 -4.832 -1.058 -7.555 O33 TP4 33
TP4 O34 O34 O 0 1 N N N 16.581 22.408 30.877 -3.264 0.481 -7.785 O34 TP4 34
TP4 HC11 1HC1 H 0 0 N N N 16.016 12.932 29.448 3.417 -2.347 -2.187 HC11 TP4 35
TP4 HC12 2HC1 H 0 0 N N N 14.905 13.395 30.584 4.338 -2.202 -3.722 HC12 TP4 36
TP4 HC21 1HC2 H 0 0 N N N 16.979 13.251 32.037 4.115 -0.040 -2.112 HC21 TP4 37
TP4 HC22 2HC2 H 0 0 N N N 18.008 13.689 30.822 3.924 0.160 -3.880 HC22 TP4 38
TP4 HC41 1HC4 H 0 0 N N N 14.847 16.221 31.245 0.590 -1.363 -2.626 HC41 TP4 39
TP4 HC51 1HC5 H 0 0 N N N 16.511 15.370 28.696 1.742 -3.025 -3.782 HC51 TP4 40
TP4 HC52 2HC5 H 0 0 N N N 14.874 15.313 28.831 2.339 -1.877 -5.024 HC52 TP4 41
TP4 HN81 1HN8 H 0 0 N N N 14.302 18.017 30.104 -1.072 -1.678 -4.376 HN81 TP4 42
TP4 H131 1H13 H 0 0 N N N 14.330 15.681 33.188 3.462 1.773 0.128 H131 TP4 43
TP4 H141 1H14 H 0 0 N N N 12.737 14.605 34.783 3.315 1.261 2.530 H141 TP4 44
TP4 H161 1H16 H 0 0 N N N 16.104 13.268 37.215 -0.686 -0.172 1.958 H161 TP4 45
TP4 H171 1H17 H 0 0 N N N 17.696 14.345 35.584 -0.519 0.351 -0.438 H171 TP4 46
TP4 H191 1H19 H 0 0 N N N 14.821 12.846 38.355 -0.675 -0.511 3.764 H191 TP4 47
TP4 H201 1H20 H 0 0 N N N 11.795 12.078 38.763 0.608 0.053 6.341 H201 TP4 48
TP4 H211 1H21 H 0 0 N N N 13.504 10.276 40.264 -2.095 -1.194 5.673 H211 TP4 49
TP4 H212 2H21 H 0 0 N N N 12.135 9.965 39.284 -1.540 -0.730 7.299 H212 TP4 50
TP4 H221 1H22 H 0 0 N N N 13.478 9.699 37.216 -1.323 1.624 6.552 H221 TP4 51
TP4 H222 2H22 H 0 0 N N N 14.768 10.621 37.779 -1.878 1.159 4.926 H222 TP4 52
TP4 H271 1H27 H 0 0 N N N 14.258 13.841 41.446 0.603 -3.887 5.222 H271 TP4 53
TP4 H281 1H28 H 0 0 N N N 15.588 7.857 40.242 -4.931 2.331 6.608 H281 TP4 54
TP4 H301 1H30 H 0 0 N N N 16.208 20.272 29.530 -0.981 -0.298 -6.839 H301 TP4 55
TP4 H302 2H30 H 0 0 N N N 14.539 20.327 29.284 -1.817 0.730 -5.650 H302 TP4 56
TP4 H311 1H31 H 0 0 N N N 14.077 20.458 31.846 -3.411 -1.110 -5.179 H311 TP4 57
TP4 H312 2H31 H 0 0 N N N 15.682 20.133 32.217 -2.575 -2.138 -6.367 H312 TP4 58
TP4 H331 1H33 H 0 0 N N N 14.741 23.877 31.404 -5.361 -0.668 -8.264 H331 TP4 59
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TP4 C1 C2 SING N N 1
TP4 C1 C5 SING N N 2
TP4 C1 HC11 SING N N 3
TP4 C1 HC12 SING N N 4
TP4 C2 N3 SING N N 5
TP4 C2 HC21 SING N N 6
TP4 C2 HC22 SING N N 7
TP4 N3 C4 SING N N 8
TP4 N3 S9 SING N N 9
TP4 C4 C5 SING N N 10
TP4 C4 C6 SING N N 11
TP4 C4 HC41 SING N N 12
TP4 C5 HC51 SING N N 13
TP4 C5 HC52 SING N N 14
TP4 C6 O7 DOUB N N 15
TP4 C6 N8 SING N N 16
TP4 N8 C30 SING N N 17
TP4 N8 HN81 SING N N 18
TP4 S9 C10 SING N N 19
TP4 S9 O11 DOUB N N 20
TP4 S9 O12 DOUB N N 21
TP4 C10 C13 DOUB Y N 22
TP4 C10 C17 SING Y N 23
TP4 C13 C14 SING Y N 24
TP4 C13 H131 SING N N 25
TP4 C14 C15 DOUB Y N 26
TP4 C14 H141 SING N N 27
TP4 C15 C16 SING Y N 28
TP4 C15 C18 SING N N 29
TP4 C16 C17 DOUB Y N 30
TP4 C16 H161 SING N N 31
TP4 C17 H171 SING N N 32
TP4 C18 N19 SING N N 33
TP4 C18 O24 DOUB N N 34
TP4 N19 C20 SING N N 35
TP4 N19 H191 SING N N 36
TP4 C20 C21 SING N N 37
TP4 C20 C25 SING N N 38
TP4 C20 H201 SING N N 39
TP4 C21 C22 SING N N 40
TP4 C21 H211 SING N N 41
TP4 C21 H212 SING N N 42
TP4 C22 C23 SING N N 43
TP4 C22 H221 SING N N 44
TP4 C22 H222 SING N N 45
TP4 C23 O28 SING N N 46
TP4 C23 O29 DOUB N N 47
TP4 C25 O26 DOUB N N 48
TP4 C25 O27 SING N N 49
TP4 O27 H271 SING N N 50
TP4 O28 H281 SING N N 51
TP4 C30 C31 SING N N 52
TP4 C30 H301 SING N N 53
TP4 C30 H302 SING N N 54
TP4 C31 C32 SING N N 55
TP4 C31 H311 SING N N 56
TP4 C31 H312 SING N N 57
TP4 C32 O33 SING N N 58
TP4 C32 O34 DOUB N N 59
TP4 O33 H331 SING N N 60
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TP4 SMILES ACDLabs 10.04 "O=C(NCCC(=O)O)C2N(S(=O)(=O)c1ccc(C(=O)NC(C(=O)O)CCC(=O)O)cc1)CCC2"
TP4 SMILES_CANONICAL CACTVS 3.341 "OC(=O)CCNC(=O)[C@H]1CCCN1[S](=O)(=O)c2ccc(cc2)C(=O)N[C@@H](CCC(O)=O)C(O)=O"
TP4 SMILES CACTVS 3.341 "OC(=O)CCNC(=O)[CH]1CCCN1[S](=O)(=O)c2ccc(cc2)C(=O)N[CH](CCC(O)=O)C(O)=O"
TP4 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1C(=O)N[C@@H](CCC(=O)O)C(=O)O)S(=O)(=O)[N@]2CCC[C@@H]2C(=O)NCCC(=O)O"
TP4 SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1C(=O)NC(CCC(=O)O)C(=O)O)S(=O)(=O)N2CCCC2C(=O)NCCC(=O)O"
TP4 InChI InChI 1.03 "InChI=1S/C20H25N3O10S/c24-16(25)8-7-14(20(30)31)22-18(28)12-3-5-13(6-4-12)34(32,33)23-11-1-2-15(23)19(29)21-10-9-17(26)27/h3-6,14-15H,1-2,7-11H2,(H,21,29)(H,22,28)(H,24,25)(H,26,27)(H,30,31)/t14-,15+/m0/s1"
TP4 InChIKey InChI 1.03 SRAHBOKVSSZEHQ-LSDHHAIUSA-N
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TP4 "SYSTEMATIC NAME" ACDLabs 10.04 "1-[(4-{[(1S)-1,3-dicarboxypropyl]carbamoyl}phenyl)sulfonyl]-D-prolyl-beta-alanine"
TP4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-[[4-[(1S,2R)-2-(2-carboxyethylcarbamoyl)pyrrolidin-1-yl]sulfonylphenyl]carbonylamino]pentanedioic acid"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TP4 "Create component" 2000-06-13 EBI
TP4 "Modify descriptor" 2011-06-04 RCSB
TP4 "Modify synonyms" 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id TP4
_pdbx_chem_comp_synonyms.name SP-876
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##