data_TPG # _chem_comp.id TPG _chem_comp.name "2,2,7-TRIMETHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE" _chem_comp.type "RNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C23 H35 N10 O18 P3" _chem_comp.mon_nstd_parent_comp_id G _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-10-01 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 832.501 _chem_comp.one_letter_code G _chem_comp.three_letter_code TPG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1XK5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TPG OBB OBB O 0 1 N N N 13.343 40.165 11.728 -10.777 -2.654 -0.634 OBB TPG 1 TPG CBF CBF C 0 1 N N N 13.120 38.960 11.831 -9.859 -1.957 -0.230 CBF TPG 2 TPG NBE NBE N 0 1 N N N 13.660 38.236 12.903 -9.119 -2.343 0.830 NBE TPG 3 TPG CBM CBM C 0 1 N N N 13.402 36.863 13.007 -8.101 -1.554 1.274 CBM TPG 4 TPG NBV NBV N 0 1 N N N 13.938 36.146 13.993 -7.363 -1.960 2.356 NBV TPG 5 TPG CBZ CBZ C 0 1 N N N 13.670 34.704 14.094 -6.260 -1.127 2.844 CBZ TPG 6 TPG CBW CBW C 0 1 N N N 14.811 36.787 14.987 -7.676 -3.225 3.025 CBW TPG 7 TPG NBN NBN N 0 1 N N N 12.636 36.268 12.080 -7.807 -0.417 0.685 NBN TPG 8 TPG CBO CBO C 0 1 N N N 12.105 36.940 11.045 -8.503 0.020 -0.378 CBO TPG 9 TPG CBG CBG C 0 1 N N N 12.332 38.306 10.888 -9.551 -0.744 -0.864 CBG TPG 10 TPG NBH NBH N 0 1 N N N 11.796 38.701 9.736 -10.136 -0.101 -1.976 NBH TPG 11 TPG CBC CBC C 0 1 N N N 11.941 40.044 9.131 -11.269 -0.584 -2.770 CBC TPG 12 TPG CBI CBI C 0 1 N N N 11.018 37.607 9.142 -9.389 1.148 -2.183 CBI TPG 13 TPG NBP NBP N 0 1 N N N 11.409 36.484 10.006 -8.361 1.171 -1.135 NBP TPG 14 TPG CBQ CBQ C 0 1 N N R 11.064 35.068 9.738 -7.364 2.223 -0.928 CBQ TPG 15 TPG OBR OBR O 0 1 N N N 12.135 34.523 8.945 -6.038 1.654 -0.858 OBR TPG 16 TPG CBX CBX C 0 1 N N R 9.799 34.877 8.898 -7.576 2.903 0.443 CBX TPG 17 TPG OCA OCA O 0 1 N N N 9.336 33.530 9.029 -8.303 4.125 0.296 OCA TPG 18 TPG CBY CBY C 0 1 N N S 10.363 35.140 7.505 -6.141 3.183 0.948 CBY TPG 19 TPG OCB OCB O 0 1 N N N 9.489 34.600 6.510 -5.938 4.587 1.125 OCB TPG 20 TPG CBS CBS C 0 1 N N R 11.648 34.321 7.607 -5.234 2.643 -0.180 CBS TPG 21 TPG CBT CBT C 0 1 N N N 12.665 34.735 6.543 -3.978 1.997 0.408 CBT TPG 22 TPG OBU OBU O 0 1 N N N 12.089 34.611 5.241 -3.135 1.544 -0.653 OBU TPG 23 TPG PBK PBK P 0 1 N N S 12.635 35.519 4.030 -1.839 0.878 0.034 PBK TPG 24 TPG OBL OBL O 0 1 N N N 13.873 36.369 4.613 -2.270 -0.174 0.981 OBL TPG 25 TPG OBJ OBJ O 0 1 N N N 11.577 36.403 3.492 -1.012 2.009 0.828 OBJ TPG 26 TPG OBD OBD O 0 1 N N N 13.231 34.495 2.939 -0.904 0.228 -1.103 OBD TPG 27 TPG PAZ PAZ P 0 1 N N N 14.794 34.107 2.933 0.045 -0.845 -0.367 PAZ TPG 28 TPG OBA OBA O 0 1 N N N 15.179 33.205 1.655 0.491 -0.298 0.934 OBA TPG 29 TPG OAY OAY O 0 1 N N N 15.807 34.894 3.671 -0.775 -2.209 -0.124 OAY TPG 30 TPG OAX OAX O 0 1 N N N 14.610 32.854 3.929 1.329 -1.148 -1.290 OAX TPG 31 TPG PAT PAT P 0 1 N N S 15.878 32.212 4.689 2.409 -1.891 -0.356 PAT TPG 32 TPG OAU OAU O 0 1 N N N 16.500 30.965 3.880 2.416 -1.264 0.985 OAU TPG 33 TPG OAS OAS O 0 1 N N N 16.657 32.962 5.698 2.019 -3.447 -0.218 OAS TPG 34 TPG "O5'" O5* O 0 1 N N N 14.985 31.281 5.653 3.871 -1.761 -1.017 "O5'" TPG 35 TPG "C5'" C5* C 0 1 N N N 14.158 31.834 6.682 4.796 -2.332 -0.090 "C5'" TPG 36 TPG "C4'" C4* C 0 1 N N R 14.854 31.847 8.045 6.213 -2.240 -0.661 "C4'" TPG 37 TPG "O4'" O4* O 0 1 N N N 15.877 32.851 8.153 6.618 -0.863 -0.743 "O4'" TPG 38 TPG "C3'" C3* C 0 1 N N S 13.883 32.243 9.156 7.203 -2.958 0.277 "C3'" TPG 39 TPG "O3'" O3* O 0 1 N N N 13.026 31.137 9.452 7.860 -4.029 -0.404 "O3'" TPG 40 TPG "C2'" C2* C 0 1 N N R 14.908 32.400 10.276 8.222 -1.854 0.664 "C2'" TPG 41 TPG "O2'" O2* O 0 1 N N N 15.403 31.115 10.662 9.554 -2.372 0.675 "O2'" TPG 42 TPG "C1'" C1* C 0 1 N N R 16.009 33.179 9.551 8.038 -0.826 -0.482 "C1'" TPG 43 TPG N9 N9 N 0 1 Y N N 15.823 34.640 9.718 8.448 0.513 -0.049 N9 TPG 44 TPG C8 C8 C 0 1 Y N N 15.274 35.468 8.832 7.646 1.456 0.526 C8 TPG 45 TPG N7 N7 N 0 1 Y N N 15.352 36.718 9.283 8.339 2.526 0.783 N7 TPG 46 TPG C5 C5 C 0 1 Y N N 15.950 36.689 10.470 9.622 2.335 0.390 C5 TPG 47 TPG C4 C4 C 0 1 Y N N 16.244 35.360 10.755 9.706 1.043 -0.141 C4 TPG 48 TPG N3 N3 N 0 1 N N N 16.847 35.020 11.905 10.875 0.596 -0.614 N3 TPG 49 TPG C2 C2 C 0 1 N N N 17.193 35.938 12.820 11.953 1.346 -0.581 C2 TPG 50 TPG N2 N2 N 0 1 N N N 17.778 35.563 13.954 13.131 0.842 -1.073 N2 TPG 51 TPG N1 N1 N 0 1 N N N 16.927 37.293 12.583 11.936 2.610 -0.071 N1 TPG 52 TPG C6 C6 C 0 1 N N N 16.298 37.671 11.390 10.790 3.132 0.420 C6 TPG 53 TPG O6 O6 O 0 1 N N N 16.079 38.858 11.153 10.765 4.262 0.878 O6 TPG 54 TPG HBE HBE H 0 1 N N N 14.236 38.705 13.602 -9.316 -3.178 1.282 HBE TPG 55 TPG HBZ1 1HBZ H 0 0 N N N 13.946 34.228 13.124 -5.794 -1.608 3.704 HBZ1 TPG 56 TPG HBZ2 2HBZ H 0 0 N N N 14.119 34.104 14.920 -5.521 -1.003 2.052 HBZ2 TPG 57 TPG HBZ3 3HBZ H 0 0 N N N 12.565 34.554 14.112 -6.645 -0.150 3.138 HBZ3 TPG 58 TPG HBW1 1HBW H 0 0 N N N 14.259 37.645 15.437 -6.988 -3.377 3.856 HBW1 TPG 59 TPG HBW2 2HBW H 0 0 N N N 15.260 36.187 15.813 -8.699 -3.194 3.401 HBW2 TPG 60 TPG HBW3 3HBW H 0 0 N N N 15.634 37.309 14.446 -7.575 -4.046 2.315 HBW3 TPG 61 TPG HBC1 1HBC H 0 0 N N N 13.036 40.240 9.054 -11.609 -1.540 -2.372 HBC1 TPG 62 TPG HBC2 2HBC H 0 0 N N N 11.492 40.375 8.166 -12.081 0.141 -2.721 HBC2 TPG 63 TPG HBC3 3HBC H 0 0 N N N 11.608 40.776 9.903 -10.957 -0.712 -3.806 HBC3 TPG 64 TPG HBI1 1HBI H 0 0 N N N 11.172 37.447 8.049 -8.923 1.149 -3.168 HBI1 TPG 65 TPG HBI2 2HBI H 0 0 N N N 9.921 37.789 9.059 -10.053 2.006 -2.078 HBI2 TPG 66 TPG HBQ HBQ H 0 1 N N N 10.902 34.581 10.728 -7.418 2.960 -1.729 HBQ TPG 67 TPG HBX HBX H 0 1 N N N 8.929 35.520 9.170 -8.096 2.230 1.125 HBX TPG 68 TPG HCA HCA H 0 1 N N N 8.551 33.411 8.508 -8.350 4.529 1.173 HCA TPG 69 TPG HBY HBY H 0 1 N N N 10.500 36.211 7.225 -5.952 2.650 1.879 HBY TPG 70 TPG HCB HCB H 0 1 N N N 9.840 34.764 5.643 -6.528 4.867 1.838 HCB TPG 71 TPG HBS HBS H 0 1 N N N 11.463 33.238 7.415 -4.962 3.446 -0.865 HBS TPG 72 TPG HBT1 1HBT H 0 0 N N N 13.619 34.166 6.634 -3.442 2.728 1.012 HBT1 TPG 73 TPG HBT2 2HBT H 0 0 N N N 13.068 35.759 6.726 -4.263 1.150 1.032 HBT2 TPG 74 TPG HBJ HBJ H 0 1 N N N 11.899 36.939 2.777 -0.752 2.674 0.176 HBJ TPG 75 TPG HAY HAY H 0 1 N N N 16.729 34.665 3.668 -1.046 -2.531 -0.994 HAY TPG 76 TPG HAS HAS H 0 1 N N N 17.404 32.584 6.146 2.026 -3.817 -1.111 HAS TPG 77 TPG "H5'" 1H5* H 0 1 N N N 13.177 31.307 6.736 4.749 -1.788 0.853 "H5'" TPG 78 TPG "H5''" 2H5* H 0 0 N N N 13.798 32.852 6.405 4.541 -3.378 0.081 "H5''" TPG 79 TPG "H4'" H4* H 0 1 N N N 15.266 30.815 8.141 6.244 -2.695 -1.651 "H4'" TPG 80 TPG "H3'" H3* H 0 1 N N N 13.219 33.116 8.956 6.688 -3.329 1.163 "H3'" TPG 81 TPG H2 H2 H 0 1 N N N 12.422 31.383 10.143 8.507 -4.397 0.213 H2 TPG 82 TPG H1 H1 H 0 1 N N N 14.520 32.886 11.201 7.971 -1.411 1.628 H1 TPG 83 TPG "H2'" H2* H 0 1 N N N 16.041 31.213 11.359 9.603 -3.002 1.406 "H2'" TPG 84 TPG "H1'" H1* H 0 1 N N N 17.011 32.912 9.961 8.599 -1.131 -1.365 "H1'" TPG 85 TPG H8 H8 H 0 1 N N N 14.824 35.165 7.872 6.594 1.332 0.736 H8 TPG 86 TPG HN21 1HN2 H 0 0 N N N 18.605 35.012 13.723 13.935 1.384 -1.055 HN21 TPG 87 TPG HN22 2HN2 H 0 0 N N N 18.041 36.261 14.650 13.159 -0.056 -1.438 HN22 TPG 88 TPG HN1 HN1 H 0 1 N N N 17.189 37.998 13.273 12.750 3.138 -0.062 HN1 TPG 89 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TPG OBB CBF DOUB N N 1 TPG CBF NBE SING N N 2 TPG CBF CBG SING N N 3 TPG NBE CBM SING N N 4 TPG NBE HBE SING N N 5 TPG CBM NBV SING N N 6 TPG CBM NBN DOUB N N 7 TPG NBV CBZ SING N N 8 TPG NBV CBW SING N N 9 TPG CBZ HBZ1 SING N N 10 TPG CBZ HBZ2 SING N N 11 TPG CBZ HBZ3 SING N N 12 TPG CBW HBW1 SING N N 13 TPG CBW HBW2 SING N N 14 TPG CBW HBW3 SING N N 15 TPG NBN CBO SING N N 16 TPG CBO CBG DOUB N N 17 TPG CBO NBP SING N N 18 TPG CBG NBH SING N N 19 TPG NBH CBC SING N N 20 TPG NBH CBI SING N N 21 TPG CBC HBC1 SING N N 22 TPG CBC HBC2 SING N N 23 TPG CBC HBC3 SING N N 24 TPG CBI NBP SING N N 25 TPG CBI HBI1 SING N N 26 TPG CBI HBI2 SING N N 27 TPG NBP CBQ SING N N 28 TPG CBQ OBR SING N N 29 TPG CBQ CBX SING N N 30 TPG CBQ HBQ SING N N 31 TPG OBR CBS SING N N 32 TPG CBX OCA SING N N 33 TPG CBX CBY SING N N 34 TPG CBX HBX SING N N 35 TPG OCA HCA SING N N 36 TPG CBY OCB SING N N 37 TPG CBY CBS SING N N 38 TPG CBY HBY SING N N 39 TPG OCB HCB SING N N 40 TPG CBS CBT SING N N 41 TPG CBS HBS SING N N 42 TPG CBT OBU SING N N 43 TPG CBT HBT1 SING N N 44 TPG CBT HBT2 SING N N 45 TPG OBU PBK SING N N 46 TPG PBK OBL DOUB N N 47 TPG PBK OBJ SING N N 48 TPG PBK OBD SING N N 49 TPG OBJ HBJ SING N N 50 TPG OBD PAZ SING N N 51 TPG PAZ OBA DOUB N N 52 TPG PAZ OAY SING N N 53 TPG PAZ OAX SING N N 54 TPG OAY HAY SING N N 55 TPG OAX PAT SING N N 56 TPG PAT OAU DOUB N N 57 TPG PAT OAS SING N N 58 TPG PAT "O5'" SING N N 59 TPG OAS HAS SING N N 60 TPG "O5'" "C5'" SING N N 61 TPG "C5'" "C4'" SING N N 62 TPG "C5'" "H5'" SING N N 63 TPG "C5'" "H5''" SING N N 64 TPG "C4'" "O4'" SING N N 65 TPG "C4'" "C3'" SING N N 66 TPG "C4'" "H4'" SING N N 67 TPG "O4'" "C1'" SING N N 68 TPG "C3'" "O3'" SING N N 69 TPG "C3'" "C2'" SING N N 70 TPG "C3'" "H3'" SING N N 71 TPG "O3'" H2 SING N N 72 TPG "C2'" "O2'" SING N N 73 TPG "C2'" "C1'" SING N N 74 TPG "C2'" H1 SING N N 75 TPG "O2'" "H2'" SING N N 76 TPG "C1'" N9 SING N N 77 TPG "C1'" "H1'" SING N N 78 TPG N9 C8 SING Y N 79 TPG N9 C4 SING Y N 80 TPG C8 N7 DOUB Y N 81 TPG C8 H8 SING N N 82 TPG N7 C5 SING Y N 83 TPG C5 C4 DOUB Y N 84 TPG C5 C6 SING N N 85 TPG C4 N3 SING N N 86 TPG N3 C2 DOUB N N 87 TPG C2 N2 SING N N 88 TPG C2 N1 SING N N 89 TPG N2 HN21 SING N N 90 TPG N2 HN22 SING N N 91 TPG N1 C6 SING N N 92 TPG N1 HN1 SING N N 93 TPG C6 O6 DOUB N N 94 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TPG SMILES_CANONICAL CACTVS 3.341 "CN(C)C1=NC2=C(N(C)CN2[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@](O)(=O)O[P@](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6C(=O)NC(=Nc56)N)[C@@H](O)[C@H]3O)C(=O)N1" TPG SMILES CACTVS 3.341 "CN(C)C1=NC2=C(N(C)CN2[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6C(=O)NC(=Nc56)N)[CH](O)[CH]3O)C(=O)N1" TPG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CN1CN(C2=C1C(=O)NC(=N2)N(C)C)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(O)O[P@@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5N=C(NC6=O)N)O)O)O)O" TPG SMILES "OpenEye OEToolkits" 1.5.0 "CN1CN(C2=C1C(=O)NC(=N2)N(C)C)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5N=C(NC6=O)N)O)O)O)O" TPG InChI InChI 1.03 ;InChI=1S/C23H35N10O18P3/c1-30(2)23-27-17-11(19(39)29-23)31(3)7-33(17)21-15(37)13(35)9(49-21)5-47-53(42,43)51-54(44,45)50-52(40,41)46-4-8-12(34)14(36)20(48-8)32-6-25-10-16(32)26-22(24)28-18(10)38/h6,8-9,12-15,20-21,34-37H,4-5,7H2,1-3H3,(H,40,41)(H,42,43)(H,44,45)(H,27,29,39)(H3,24,26,28,38)/t8-,9-,12-,13-,14-,15-,20-,21-/m1/s1 ; TPG InChIKey InChI 1.03 QBEUSSFUVVPDGT-NAGRZYTCSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TPG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[[[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl] [(2R,3S,4R,5R)-5-(2-dimethylamino-7-methyl-6-oxo-1,8-dihydropurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TPG "Create component" 2004-10-01 EBI TPG "Modify descriptor" 2011-06-04 RCSB #