data_TQP # _chem_comp.id TQP _chem_comp.name ;(2R,3R,4S,5S,6R)-3,5-dihydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H35 N4 O19 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-01-12 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 776.471 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TQP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3FRK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TQP O2P O2P O 0 1 N N N 34.866 -15.432 -14.739 3.236 -6.970 -0.742 O2P TQP 1 TQP P P P 0 1 N N N 34.372 -14.149 -15.569 2.833 -5.423 -0.553 P TQP 2 TQP O3P O3P O 0 1 N N N 34.535 -12.885 -14.612 1.958 -4.938 -1.815 O3P TQP 3 TQP O1P O1P O 0 1 N N N 32.969 -14.324 -15.989 2.040 -5.267 0.686 O1P TQP 4 TQP O4P O4P O 0 1 N N N 35.290 -13.909 -16.878 4.169 -4.529 -0.452 O4P TQP 5 TQP "C5'" "C5'" C 0 1 N N N 36.638 -14.350 -16.621 4.148 -3.127 -0.177 "C5'" TQP 6 TQP C5P C5P C 0 1 Y N N 37.515 -13.706 -17.665 5.560 -2.599 -0.151 C5P TQP 7 TQP C4P C4P C 0 1 Y N N 37.578 -12.307 -17.767 5.806 -1.244 0.100 C4P TQP 8 TQP "C4'" "C4'" C 0 1 N N N 36.854 -11.421 -16.853 4.696 -0.303 0.345 "C4'" TQP 9 TQP C3P C3P C 0 1 Y N N 38.391 -11.739 -18.763 7.141 -0.807 0.113 C3P TQP 10 TQP "O3'" "O3'" O 0 1 N N N 38.457 -10.390 -18.906 7.438 0.495 0.352 "O3'" TQP 11 TQP C2P C2P C 0 1 Y N N 39.113 -12.565 -19.608 8.150 -1.730 -0.122 C2P TQP 12 TQP "C2'" "C2'" C 0 1 N N N 39.973 -11.967 -20.698 9.588 -1.280 -0.112 "C2'" TQP 13 TQP N1P N1P N 0 1 Y N N 39.036 -13.869 -19.476 7.867 -2.996 -0.353 N1P TQP 14 TQP C6P C6P C 0 1 Y N N 38.271 -14.444 -18.555 6.627 -3.446 -0.368 C6P TQP 15 TQP O4 O4 O 0 1 N N N 27.438 -5.111 -10.345 -9.197 -1.845 3.459 O4 TQP 16 TQP C4 C4 C 0 1 N N N 28.273 -4.288 -10.715 -8.372 -1.849 2.562 C4 TQP 17 TQP N3 N3 N 0 1 N N N 27.920 -2.993 -10.838 -8.329 -0.837 1.673 N3 TQP 18 TQP C2 C2 C 0 1 N N N 28.815 -2.085 -11.269 -7.418 -0.842 0.683 C2 TQP 19 TQP O2 O2 O 0 1 N N N 28.496 -0.910 -11.385 -7.390 0.078 -0.112 O2 TQP 20 TQP C5 C5 C 0 1 N N N 29.603 -4.676 -11.020 -7.447 -2.915 2.447 C5 TQP 21 TQP C5M C5M C 0 1 N N N 30.017 -6.116 -10.873 -7.470 -4.056 3.431 C5M TQP 22 TQP C6 C6 C 0 1 N N N 30.478 -3.743 -11.458 -6.543 -2.895 1.444 C6 TQP 23 TQP N1 N1 N 0 1 N N N 30.063 -2.447 -11.586 -6.536 -1.851 0.559 N1 TQP 24 TQP "C1'" "C1'" C 0 1 N N R 30.993 -1.440 -12.098 -5.556 -1.830 -0.529 "C1'" TQP 25 TQP "O4'" "O4'" O 0 1 N N N 31.621 -1.985 -13.272 -4.840 -0.583 -0.517 "O4'" TQP 26 TQP C2H C2H C 0 1 N N N 32.069 -1.047 -11.098 -6.278 -1.931 -1.887 C2H TQP 27 TQP "C3'" "C3'" C 0 1 N N S 33.402 -1.325 -11.815 -5.850 -0.648 -2.641 "C3'" TQP 28 TQP O3H O3H O 0 1 N N N 34.179 -0.131 -11.777 -5.580 -0.931 -4.015 O3H TQP 29 TQP C4H C4H C 0 1 N N R 33.060 -1.690 -13.279 -4.552 -0.250 -1.892 C4H TQP 30 TQP C5H C5H C 0 1 N N N 33.979 -2.855 -13.706 -4.285 1.250 -2.039 C5H TQP 31 TQP "O5'" "O5'" O 0 1 N N N 33.695 -3.723 -12.564 -3.079 1.588 -1.351 "O5'" TQP 32 TQP PA PA P 0 1 N N R 34.955 -4.633 -11.977 -2.492 3.086 -1.296 PA TQP 33 TQP O1A O1A O 0 1 N N N 34.153 -5.519 -11.064 -3.510 4.032 -0.484 O1A TQP 34 TQP O2A O2A O 0 1 N N N 36.001 -3.687 -11.166 -2.329 3.603 -2.673 O2A TQP 35 TQP O3A O3A O 0 1 N N N 35.882 -5.739 -12.713 -1.063 3.075 -0.554 O3A TQP 36 TQP PB PB P 0 1 N N S 36.937 -5.232 -13.800 0.148 4.131 -0.443 PB TQP 37 TQP O1B O1B O 0 1 N N N 38.293 -5.168 -13.145 -0.211 5.245 0.662 O1B TQP 38 TQP O2B O2B O 0 1 N N N 36.637 -3.752 -14.336 0.354 4.785 -1.755 O2B TQP 39 TQP O3B O3B O 0 1 N N N 37.058 -6.381 -14.878 1.494 3.360 -0.011 O3B TQP 40 TQP O4Q O4Q O 0 1 N N N 35.268 -10.416 -14.824 3.903 1.486 3.204 O4Q TQP 41 TQP C4Q C4Q C 0 1 N N S 36.541 -9.822 -14.529 4.000 2.506 2.207 C4Q TQP 42 TQP C5Q C5Q C 0 1 N N R 36.409 -8.748 -13.444 2.890 3.538 2.421 C5Q TQP 43 TQP O5Q O5Q O 0 1 N N N 37.660 -8.067 -13.187 2.954 4.524 1.389 O5Q TQP 44 TQP C6Q C6Q C 0 1 N N N 35.951 -9.494 -12.175 3.074 4.211 3.782 C6Q TQP 45 TQP C3Q C3Q C 0 1 N N S 37.129 -9.237 -15.812 3.844 1.879 0.818 C3Q TQP 46 TQP N3Q N3Q N 0 1 N N N 37.483 -10.336 -16.724 4.946 0.945 0.575 N3Q TQP 47 TQP C2Q C2Q C 0 1 N N R 38.388 -8.427 -15.489 3.872 2.990 -0.237 C2Q TQP 48 TQP O2Q O2Q O 0 1 N N N 38.745 -7.705 -16.673 3.655 2.425 -1.531 O2Q TQP 49 TQP C1Q C1Q C 0 1 N N R 38.023 -7.414 -14.406 2.767 4.004 0.071 C1Q TQP 50 TQP HO2P HO2P H 0 0 N N N 34.964 -16.172 -15.327 2.479 -7.568 -0.811 HO2P TQP 51 TQP HO3P HO3P H 0 0 N N N 34.567 -13.174 -13.708 2.416 -5.012 -2.663 HO3P TQP 52 TQP "H5'" "H5'" H 0 1 N N N 36.955 -14.044 -15.613 3.582 -2.613 -0.954 "H5'" TQP 53 TQP "H5'A" "H5'A" H 0 0 N N N 36.709 -15.447 -16.670 3.677 -2.953 0.791 "H5'A" TQP 54 TQP "H4'" "H4'" H 0 1 N N N 35.922 -11.661 -16.363 3.676 -0.656 0.332 "H4'" TQP 55 TQP "HO3'" "HO3'" H 0 0 N N N 38.472 -9.981 -18.049 7.572 0.704 1.286 "HO3'" TQP 56 TQP "H2'" "H2'" H 0 1 N N N 39.368 -11.822 -21.605 9.990 -1.367 0.897 "H2'" TQP 57 TQP "H2'A" "H2'A" H 0 0 N N N 40.369 -10.997 -20.362 10.169 -1.905 -0.790 "H2'A" TQP 58 TQP "H2'B" "H2'B" H 0 0 N N N 40.809 -12.647 -20.920 9.645 -0.241 -0.437 "H2'B" TQP 59 TQP H6P H6P H 0 1 N N N 38.239 -15.522 -18.500 6.444 -4.492 -0.562 H6P TQP 60 TQP HN3 HN3 H 0 1 N N N 26.990 -2.706 -10.608 -8.957 -0.101 1.747 HN3 TQP 61 TQP H5M H5M H 0 1 N N N 30.118 -6.573 -11.869 -8.265 -3.891 4.160 H5M TQP 62 TQP H5MA H5MA H 0 0 N N N 30.981 -6.168 -10.346 -7.653 -4.990 2.900 H5MA TQP 63 TQP H5MB H5MB H 0 0 N N N 29.254 -6.660 -10.296 -6.511 -4.111 3.946 H5MB TQP 64 TQP H6 H6 H 0 1 N N N 31.493 -4.019 -11.704 -5.830 -3.699 1.341 H6 TQP 65 TQP "H1'" "H1'" H 0 1 N N N 30.419 -0.527 -12.314 -4.859 -2.661 -0.417 "H1'" TQP 66 TQP H2H H2H H 0 1 N N N 31.983 0.015 -10.824 -5.950 -2.819 -2.428 H2H TQP 67 TQP H2AA H2AA H 0 0 N N N 31.982 -1.612 -10.158 -7.358 -1.949 -1.744 H2AA TQP 68 TQP "H3'" "H3'" H 0 1 N N N 33.967 -2.141 -11.342 -6.608 0.129 -2.547 "H3'" TQP 69 TQP HO3A HO3A H 0 0 N N N 34.352 0.106 -10.873 -6.342 -1.270 -4.504 HO3A TQP 70 TQP "H4'A" "H4'A" H 0 0 N N N 33.240 -0.898 -14.021 -3.705 -0.829 -2.259 "H4'A" TQP 71 TQP H5H H5H H 0 1 N N N 33.718 -3.297 -14.679 -4.184 1.500 -3.095 H5H TQP 72 TQP H5AA H5AA H 0 0 N N N 35.036 -2.607 -13.884 -5.116 1.810 -1.611 H5AA TQP 73 TQP HO1A HO1A H 0 0 N N N 33.984 -6.348 -11.495 -3.665 3.752 0.429 HO1A TQP 74 TQP HO1B HO1B H 0 0 N N N 38.968 -5.155 -13.814 -0.359 4.887 1.548 HO1B TQP 75 TQP HO4Q HO4Q H 0 0 N N N 34.785 -10.547 -14.017 3.988 1.813 4.110 HO4Q TQP 76 TQP H4Q H4Q H 0 1 N N N 37.220 -10.595 -14.140 4.971 2.995 2.280 H4Q TQP 77 TQP H5Q H5Q H 0 1 N N N 35.698 -7.971 -13.762 1.920 3.041 2.389 H5Q TQP 78 TQP H6Q H6Q H 0 1 N N N 35.842 -10.566 -12.398 4.043 4.708 3.814 H6Q TQP 79 TQP H6QA H6QA H 0 0 N N N 36.700 -9.360 -11.380 2.283 4.946 3.934 H6QA TQP 80 TQP H6QB H6QB H 0 0 N N N 34.984 -9.089 -11.841 3.026 3.458 4.569 H6QB TQP 81 TQP H3Q H3Q H 0 1 N N N 36.386 -8.578 -16.284 2.894 1.348 0.762 H3Q TQP 82 TQP H2Q H2Q H 0 1 N N N 39.212 -9.075 -15.156 4.841 3.489 -0.214 H2Q TQP 83 TQP HO2Q HO2Q H 0 0 N N N 38.824 -6.781 -16.469 3.660 3.073 -2.249 HO2Q TQP 84 TQP H1Q H1Q H 0 1 N N N 38.926 -6.832 -14.170 2.810 4.819 -0.651 H1Q TQP 85 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TQP P O2P SING N N 1 TQP O2P HO2P SING N N 2 TQP O4P P SING N N 3 TQP O1P P DOUB N N 4 TQP P O3P SING N N 5 TQP O3P HO3P SING N N 6 TQP O4P "C5'" SING N N 7 TQP C5P "C5'" SING N N 8 TQP "C5'" "H5'" SING N N 9 TQP "C5'" "H5'A" SING N N 10 TQP C6P C5P DOUB Y N 11 TQP C4P C5P SING Y N 12 TQP C3P C4P DOUB Y N 13 TQP C4P "C4'" SING N N 14 TQP "C4'" N3Q DOUB N N 15 TQP "C4'" "H4'" SING N N 16 TQP C2P C3P SING Y N 17 TQP "O3'" C3P SING N N 18 TQP "O3'" "HO3'" SING N N 19 TQP "C2'" C2P SING N N 20 TQP C2P N1P DOUB Y N 21 TQP "C2'" "H2'" SING N N 22 TQP "C2'" "H2'A" SING N N 23 TQP "C2'" "H2'B" SING N N 24 TQP N1P C6P SING Y N 25 TQP C6P H6P SING N N 26 TQP C4 O4 DOUB N N 27 TQP C5 C4 SING N N 28 TQP N3 C4 SING N N 29 TQP C2 N3 SING N N 30 TQP N3 HN3 SING N N 31 TQP N1 C2 SING N N 32 TQP O2 C2 DOUB N N 33 TQP C6 C5 DOUB N N 34 TQP C5 C5M SING N N 35 TQP C5M H5M SING N N 36 TQP C5M H5MA SING N N 37 TQP C5M H5MB SING N N 38 TQP N1 C6 SING N N 39 TQP C6 H6 SING N N 40 TQP "C1'" N1 SING N N 41 TQP "O4'" "C1'" SING N N 42 TQP "C1'" C2H SING N N 43 TQP "C1'" "H1'" SING N N 44 TQP C4H "O4'" SING N N 45 TQP "C3'" C2H SING N N 46 TQP C2H H2H SING N N 47 TQP C2H H2AA SING N N 48 TQP C4H "C3'" SING N N 49 TQP "C3'" O3H SING N N 50 TQP "C3'" "H3'" SING N N 51 TQP O3H HO3A SING N N 52 TQP C5H C4H SING N N 53 TQP C4H "H4'A" SING N N 54 TQP C5H "O5'" SING N N 55 TQP C5H H5H SING N N 56 TQP C5H H5AA SING N N 57 TQP "O5'" PA SING N N 58 TQP O3A PA SING N N 59 TQP PA O2A DOUB N N 60 TQP PA O1A SING N N 61 TQP O1A HO1A SING N N 62 TQP PB O3A SING N N 63 TQP O3B PB SING N N 64 TQP O2B PB DOUB N N 65 TQP PB O1B SING N N 66 TQP O1B HO1B SING N N 67 TQP O3B C1Q SING N N 68 TQP O4Q C4Q SING N N 69 TQP O4Q HO4Q SING N N 70 TQP C3Q C4Q SING N N 71 TQP C4Q C5Q SING N N 72 TQP C4Q H4Q SING N N 73 TQP C5Q O5Q SING N N 74 TQP C5Q C6Q SING N N 75 TQP C5Q H5Q SING N N 76 TQP C1Q O5Q SING N N 77 TQP C6Q H6Q SING N N 78 TQP C6Q H6QA SING N N 79 TQP C6Q H6QB SING N N 80 TQP N3Q C3Q SING N N 81 TQP C3Q C2Q SING N N 82 TQP C3Q H3Q SING N N 83 TQP O2Q C2Q SING N N 84 TQP C2Q C1Q SING N N 85 TQP C2Q H2Q SING N N 86 TQP O2Q HO2Q SING N N 87 TQP C1Q H1Q SING N N 88 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TQP SMILES ACDLabs 10.04 "O=P(OC2OC(C(O)C(/N=C/c1c(cnc(c1O)C)COP(=O)(O)O)C2O)C)(O)OP(=O)(O)OCC4OC(N3C=C(C(=O)NC3=O)C)CC4O" TQP SMILES_CANONICAL CACTVS 3.341 "C[C@H]1O[C@H](O[P@@](O)(=O)O[P@@](O)(=O)OC[C@H]2O[C@H](C[C@@H]2O)N3C=C(C)C(=O)NC3=O)[C@H](O)[C@@H](N=Cc4c(O)c(C)ncc4CO[P](O)(O)=O)[C@@H]1O" TQP SMILES CACTVS 3.341 "C[CH]1O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH](C[CH]2O)N3C=C(C)C(=O)NC3=O)[CH](O)[CH](N=Cc4c(O)c(C)ncc4CO[P](O)(O)=O)[CH]1O" TQP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1c(c(c(cn1)COP(=O)(O)O)\C=N\[C@H]2[C@@H]([C@H](O[C@@H]([C@@H]2O)O[P@](=O)(O)O[P@](=O)(O)OC[C@@H]3[C@H](C[C@@H](O3)N4C=C(C(=O)NC4=O)C)O)C)O)O" TQP SMILES "OpenEye OEToolkits" 1.5.0 "Cc1c(c(c(cn1)COP(=O)(O)O)C=NC2C(C(OC(C2O)OP(=O)(O)OP(=O)(O)OCC3C(CC(O3)N4C=C(C(=O)NC4=O)C)O)C)O)O" TQP InChI InChI 1.03 ;InChI=1S/C24H35N4O19P3/c1-10-7-28(24(34)27-22(10)33)17-4-15(29)16(45-17)9-43-49(38,39)47-50(40,41)46-23-21(32)18(20(31)12(3)44-23)26-6-14-13(8-42-48(35,36)37)5-25-11(2)19(14)30/h5-7,12,15-18,20-21,23,29-32H,4,8-9H2,1-3H3,(H,38,39)(H,40,41)(H,27,33,34)(H2,35,36,37)/b26-6+/t12-,15+,16-,17-,18+,20-,21-,23-/m1/s1 ; TQP InChIKey InChI 1.03 UJDWKFAFGYHSFM-HMSDFHDVSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TQP "SYSTEMATIC NAME" ACDLabs 10.04 ;(2R,3R,4S,5S,6R)-3,5-dihydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name) ; TQP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[[(2R,3R,4S,5S,6R)-3,5-dihydroxy-4-[[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-6-methyl-oxan-2-yl]oxy-hydroxy-phosphoryl] [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-pyrimidin-1-yl)oxolan-2-yl]methyl hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TQP "Create component" 2009-01-12 RCSB TQP "Modify aromatic_flag" 2011-06-04 RCSB TQP "Modify descriptor" 2011-06-04 RCSB #