data_TRD
#

_chem_comp.id                                   TRD
_chem_comp.name                                 TRIDECANE
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H28"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "LIPID FRAGMENT"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-09-17
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       184.361
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    TRD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1CWQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TRD  C1    C1    C  0  1  N  N  N  -34.169  37.671   -3.111  -0.403   0.000   7.495  C1    TRD   1  
TRD  C2    C2    C  0  1  N  N  N  -34.704  36.988   -4.339   0.480   0.000   6.246  C2    TRD   2  
TRD  C3    C3    C  0  1  N  N  N  -33.905  35.796   -4.791  -0.403   0.000   4.997  C3    TRD   3  
TRD  C4    C4    C  0  1  N  N  N  -33.924  35.515   -6.265   0.480   0.000   3.747  C4    TRD   4  
TRD  C5    C5    C  0  1  N  N  N  -33.694  34.082   -6.654  -0.403   0.000   2.498  C5    TRD   5  
TRD  C6    C6    C  0  1  N  N  N  -33.725  33.835   -8.122   0.480   0.000   1.249  C6    TRD   6  
TRD  C7    C7    C  0  1  N  N  N  -32.659  32.947   -8.682  -0.403   0.000   0.000  C7    TRD   7  
TRD  C8    C8    C  0  1  N  N  N  -32.757  32.760  -10.163   0.480   0.000  -1.249  C8    TRD   8  
TRD  C9    C9    C  0  1  N  N  N  -31.888  31.698  -10.760  -0.403   0.000  -2.498  C9    TRD   9  
TRD  C10   C10   C  0  1  N  N  N  -32.012  31.542  -12.254   0.480   0.000  -3.747  C10   TRD  10  
TRD  C11   C11   C  0  1  N  N  N  -33.352  31.075  -12.754  -0.403   0.000  -4.997  C11   TRD  11  
TRD  C12   C12   C  0  1  N  N  N  -33.491  30.912  -14.248   0.480   0.000  -6.246  C12   TRD  12  
TRD  C13   C13   C  0  1  N  N  N  -34.789  30.301  -14.687  -0.403   0.000  -7.495  C13   TRD  13  
TRD  H11   1H1   H  0  1  N  N  N  -34.761  38.554   -2.776  -1.032  -0.890   7.495  H11   TRD  14  
TRD  H12   2H1   H  0  1  N  N  N  -34.059  36.939   -2.277   0.226   0.000   8.385  H12   TRD  15  
TRD  H13   3H1   H  0  1  N  N  N  -33.100  37.954   -3.259  -1.032   0.890   7.495  H13   TRD  16  
TRD  H21   1H2   H  0  1  N  N  N  -35.772  36.704   -4.190   1.109   0.890   6.246  H21   TRD  17  
TRD  H22   2H2   H  0  1  N  N  N  -34.813  37.720   -5.172   1.109  -0.890   6.246  H22   TRD  18  
TRD  H31   1H3   H  0  1  N  N  N  -32.852  35.888   -4.436  -1.032  -0.890   4.997  H31   TRD  19  
TRD  H32   2H3   H  0  1  N  N  N  -34.226  34.888   -4.228  -1.032   0.890   4.997  H32   TRD  20  
TRD  H41   1H4   H  0  1  N  N  N  -34.877  35.883   -6.711   1.109   0.890   3.747  H41   TRD  21  
TRD  H42   2H4   H  0  1  N  N  N  -33.193  36.174   -6.788   1.109  -0.890   3.747  H42   TRD  22  
TRD  H51   1H5   H  0  1  N  N  N  -32.739  33.707   -6.215  -1.032  -0.890   2.498  H51   TRD  23  
TRD  H52   2H5   H  0  1  N  N  N  -34.418  33.414   -6.130  -1.032   0.890   2.498  H52   TRD  24  
TRD  H61   1H6   H  0  1  N  N  N  -34.727  33.442   -8.412   1.109   0.890   1.249  H61   TRD  25  
TRD  H62   2H6   H  0  1  N  N  N  -33.720  34.809   -8.663   1.109  -0.890   1.249  H62   TRD  26  
TRD  H71   1H7   H  0  1  N  N  N  -31.646  33.316   -8.396  -1.032  -0.890   0.000  H71   TRD  27  
TRD  H72   2H7   H  0  1  N  N  N  -32.650  31.962   -8.159  -1.032   0.890   0.000  H72   TRD  28  
TRD  H81   1H8   H  0  1  N  N  N  -33.819  32.580  -10.449   1.109   0.890  -1.249  H81   TRD  29  
TRD  H82   2H8   H  0  1  N  N  N  -32.569  33.731  -10.677   1.109  -0.890  -1.249  H82   TRD  30  
TRD  H91   1H9   H  0  1  N  N  N  -30.822  31.867  -10.477  -1.032  -0.890  -2.498  H91   TRD  31  
TRD  H92   2H9   H  0  1  N  N  N  -32.070  30.721  -10.254  -1.032   0.890  -2.498  H92   TRD  32  
TRD  H101  1H10  H  0  0  N  N  N  -31.728  32.494  -12.760   1.109   0.890  -3.747  H101  TRD  33  
TRD  H102  2H10  H  0  0  N  N  N  -31.209  30.867  -12.633   1.109  -0.890  -3.747  H102  TRD  34  
TRD  H111  1H11  H  0  0  N  N  N  -33.632  30.123  -12.244  -1.032  -0.890  -4.997  H111  TRD  35  
TRD  H112  2H11  H  0  0  N  N  N  -34.151  31.752  -12.373  -1.032   0.890  -4.997  H112  TRD  36  
TRD  H121  1H12  H  0  0  N  N  N  -33.326  31.887  -14.762   1.109   0.890  -6.246  H121  TRD  37  
TRD  H122  2H12  H  0  0  N  N  N  -32.630  30.333  -14.657   1.109  -0.890  -6.246  H122  TRD  38  
TRD  H131  1H13  H  0  0  N  N  N  -34.891  30.180  -15.790   0.226   0.000  -8.385  H131  TRD  39  
TRD  H132  2H13  H  0  0  N  N  N  -34.953  29.325  -14.172  -1.032  -0.890  -7.495  H132  TRD  40  
TRD  H133  3H13  H  0  0  N  N  N  -35.649  30.880  -14.277  -1.032   0.890  -7.495  H133  TRD  41  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TRD  C1   C2    SING  N  N   1  
TRD  C1   H11   SING  N  N   2  
TRD  C1   H12   SING  N  N   3  
TRD  C1   H13   SING  N  N   4  
TRD  C2   C3    SING  N  N   5  
TRD  C2   H21   SING  N  N   6  
TRD  C2   H22   SING  N  N   7  
TRD  C3   C4    SING  N  N   8  
TRD  C3   H31   SING  N  N   9  
TRD  C3   H32   SING  N  N  10  
TRD  C4   C5    SING  N  N  11  
TRD  C4   H41   SING  N  N  12  
TRD  C4   H42   SING  N  N  13  
TRD  C5   C6    SING  N  N  14  
TRD  C5   H51   SING  N  N  15  
TRD  C5   H52   SING  N  N  16  
TRD  C6   C7    SING  N  N  17  
TRD  C6   H61   SING  N  N  18  
TRD  C6   H62   SING  N  N  19  
TRD  C7   C8    SING  N  N  20  
TRD  C7   H71   SING  N  N  21  
TRD  C7   H72   SING  N  N  22  
TRD  C8   C9    SING  N  N  23  
TRD  C8   H81   SING  N  N  24  
TRD  C8   H82   SING  N  N  25  
TRD  C9   C10   SING  N  N  26  
TRD  C9   H91   SING  N  N  27  
TRD  C9   H92   SING  N  N  28  
TRD  C10  C11   SING  N  N  29  
TRD  C10  H101  SING  N  N  30  
TRD  C10  H102  SING  N  N  31  
TRD  C11  C12   SING  N  N  32  
TRD  C11  H111  SING  N  N  33  
TRD  C11  H112  SING  N  N  34  
TRD  C12  C13   SING  N  N  35  
TRD  C12  H121  SING  N  N  36  
TRD  C12  H122  SING  N  N  37  
TRD  C13  H131  SING  N  N  38  
TRD  C13  H132  SING  N  N  39  
TRD  C13  H133  SING  N  N  40  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TRD  SMILES            ACDLabs               10.04  "C(CCCCCCCC)CCCC"  
TRD  SMILES_CANONICAL  CACTVS                3.341  CCCCCCCCCCCCC  
TRD  SMILES            CACTVS                3.341  CCCCCCCCCCCCC  
TRD  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  CCCCCCCCCCCCC  
TRD  SMILES            "OpenEye OEToolkits"  1.5.0  CCCCCCCCCCCCC  
TRD  InChI             InChI                 1.03   "InChI=1S/C13H28/c1-3-5-7-9-11-13-12-10-8-6-4-2/h3-13H2,1-2H3"  
TRD  InChIKey          InChI                 1.03   IIYFAKIEWZDVMP-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TRD  "SYSTEMATIC NAME"  ACDLabs               10.04  tridecane  
TRD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  tridecane  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TRD  "Create component"   1999-09-17  EBI   
TRD  "Modify descriptor"  2011-06-04  RCSB  
TRD  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     TRD
_pdbx_chem_comp_synonyms.name        "LIPID FRAGMENT"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##