data_TRK # _chem_comp.id TRK _chem_comp.name "TIRANDAMYCIN D" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H27 N O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-12-22 _chem_comp.pdbx_modified_date 2011-06-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 401.453 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TRK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2Y3R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TRK N N N 0 1 N N N 16.206 -28.114 1.762 7.570 0.012 0.748 N TRK 1 TRK C1 C1 C 0 1 N N R 26.453 -26.923 2.644 -2.830 0.289 -0.699 C1 TRK 2 TRK O1 O1 O 0 1 N N N 26.103 -25.499 2.584 -3.144 -1.103 -0.576 O1 TRK 3 TRK C2 C2 C 0 1 N N R 26.031 -27.535 1.314 -1.684 0.468 -1.697 C2 TRK 4 TRK O2 O2 O 0 1 N N N 16.909 -26.809 -0.008 6.574 -1.996 1.097 O2 TRK 5 TRK C3 C3 C 0 1 N N N 26.981 -27.036 0.192 -2.145 0.029 -3.088 C3 TRK 6 TRK O3 O3 O 0 1 N N N 19.293 -29.093 3.268 4.930 2.016 -0.559 O3 TRK 7 TRK C4 C4 C 0 1 N N N 24.618 -27.067 0.934 -0.509 -0.372 -1.269 C4 TRK 8 TRK O4 O4 O 0 1 N N N 19.612 -26.547 -0.298 3.879 -2.052 0.402 O4 TRK 9 TRK C5 C5 C 0 1 N N N 23.527 -27.804 1.169 0.696 0.189 -1.122 C5 TRK 10 TRK O5 O5 O 0 1 N N N 25.455 -25.393 4.855 -3.768 -0.915 1.654 O5 TRK 11 TRK C6 C6 C 0 1 N N N 22.230 -27.288 0.697 1.774 -0.573 -0.605 C6 TRK 12 TRK O6 O6 O 0 1 N N N 27.642 -27.706 6.365 -5.016 2.278 1.969 O6 TRK 13 TRK C7 C7 C 0 1 N N N 21.108 -27.705 1.268 2.998 -0.003 -0.455 C7 TRK 14 TRK C8 C8 C 0 1 N N N 19.779 -27.286 0.757 4.069 -0.760 0.059 C8 TRK 15 TRK C9 C9 C 0 1 N N N 18.543 -27.778 1.379 5.333 -0.171 0.213 C9 TRK 16 TRK C10 C10 C 0 1 N N N 17.153 -27.499 1.004 6.529 -0.836 0.731 C10 TRK 17 TRK C11 C11 C 0 1 N N N 16.856 -28.865 2.842 7.133 1.315 0.236 C11 TRK 18 TRK C12 C12 C 0 1 N N N 18.311 -28.607 2.554 5.668 1.164 -0.105 C12 TRK 19 TRK C13 C13 C 0 1 N N N 23.611 -29.198 1.851 0.907 1.631 -1.505 C13 TRK 20 TRK C14 C14 C 0 1 N N R 25.803 -27.609 3.864 -2.406 0.827 0.670 C14 TRK 21 TRK C15 C15 C 0 1 N N N 26.372 -29.015 4.084 -2.239 2.346 0.590 C15 TRK 22 TRK C16 C16 C 0 1 N N S 25.839 -26.770 5.157 -3.472 0.487 1.711 C16 TRK 23 TRK C17 C17 C 0 1 N N S 26.278 -24.798 3.835 -4.204 -1.347 0.362 C17 TRK 24 TRK C18 C18 C 0 1 N N N 25.841 -23.361 3.608 -4.526 -2.843 0.399 C18 TRK 25 TRK C19 C19 C 0 1 N N N 27.760 -24.825 4.271 -5.410 -0.559 -0.075 C19 TRK 26 TRK C20 C20 C 0 1 N N N 28.673 -23.807 3.666 -6.356 -1.159 -1.083 C20 TRK 27 TRK C21 C21 C 0 1 N N N 28.230 -25.724 5.201 -5.660 0.657 0.409 C21 TRK 28 TRK C22 C22 C 0 1 N N N 27.278 -26.770 5.691 -4.750 1.236 1.407 C22 TRK 29 TRK H H H 0 1 N N N 15.219 -28.062 1.607 8.466 -0.202 1.053 H TRK 30 TRK H111 H111 H 0 0 N N N 16.559 -28.503 3.837 7.263 2.080 1.001 H111 TRK 31 TRK H112 H112 H 0 0 N N N 16.609 -29.937 2.810 7.701 1.576 -0.657 H112 TRK 32 TRK H1 H1 H 0 1 N N N 27.534 -27.066 2.786 -3.707 0.831 -1.051 H1 TRK 33 TRK H2 H2 H 0 1 N N N 26.064 -28.630 1.417 -1.389 1.517 -1.727 H2 TRK 34 TRK H14 H14 H 0 1 N N N 24.736 -27.702 3.613 -1.459 0.373 0.961 H14 TRK 35 TRK H31C H31C H 0 0 N N N 26.678 -27.477 -0.769 -2.497 -1.002 -3.046 H31C TRK 36 TRK H32C H32C H 0 0 N N N 26.926 -25.939 0.126 -2.956 0.676 -3.423 H32C TRK 37 TRK H33C H33C H 0 0 N N N 28.013 -27.338 0.424 -1.312 0.100 -3.787 H33C TRK 38 TRK H4 H4 H 0 1 N N N 24.501 -26.105 0.458 -0.639 -1.428 -1.081 H4 TRK 39 TRK H6 H6 H 0 1 N N N 22.193 -26.573 -0.111 1.622 -1.607 -0.330 H6 TRK 40 TRK H131 H131 H 0 0 N N N 22.601 -29.623 1.944 0.669 2.271 -0.655 H131 TRK 41 TRK H132 H132 H 0 0 N N N 24.235 -29.868 1.241 1.948 1.781 -1.793 H132 TRK 42 TRK H133 H133 H 0 0 N N N 24.057 -29.091 2.851 0.258 1.883 -2.343 H133 TRK 43 TRK H16 H16 H 0 1 N N N 25.146 -27.194 5.899 -3.109 0.746 2.705 H16 TRK 44 TRK H7 H7 H 0 1 N N N 21.162 -28.363 2.123 3.149 1.030 -0.729 H7 TRK 45 TRK H151 H151 H 0 0 N N N 25.888 -29.474 4.959 -3.148 2.791 0.185 H151 TRK 46 TRK H152 H152 H 0 0 N N N 26.180 -29.632 3.193 -2.054 2.744 1.588 H152 TRK 47 TRK H153 H153 H 0 0 N N N 27.456 -28.949 4.257 -1.397 2.586 -0.059 H153 TRK 48 TRK H181 H181 H 0 0 N N N 25.959 -22.790 4.541 -3.639 -3.398 0.704 H181 TRK 49 TRK H182 H182 H 0 0 N N N 26.462 -22.909 2.820 -5.331 -3.023 1.112 H182 TRK 50 TRK H183 H183 H 0 0 N N N 24.786 -23.343 3.298 -4.838 -3.172 -0.592 H183 TRK 51 TRK H201 H201 H 0 0 N N N 29.689 -23.943 4.064 -7.133 -1.719 -0.564 H201 TRK 52 TRK H202 H202 H 0 0 N N N 28.688 -23.931 2.573 -6.813 -0.363 -1.670 H202 TRK 53 TRK H203 H203 H 0 0 N N N 28.313 -22.798 3.916 -5.805 -1.828 -1.745 H203 TRK 54 TRK H21 H21 H 0 1 N N N 29.246 -25.677 5.563 -6.523 1.211 0.071 H21 TRK 55 TRK HO4 HO4 H 0 1 N N N 18.683 -26.446 -0.470 4.671 -2.488 0.744 HO4 TRK 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TRK N C10 SING N N 1 TRK N C11 SING N N 2 TRK C1 O1 SING N N 3 TRK C1 C2 SING N N 4 TRK C1 C14 SING N N 5 TRK O1 C17 SING N N 6 TRK C2 C3 SING N N 7 TRK C2 C4 SING N N 8 TRK O2 C10 DOUB N N 9 TRK O3 C12 DOUB N N 10 TRK C4 C5 DOUB N N 11 TRK O4 C8 SING N N 12 TRK C5 C6 SING N N 13 TRK C5 C13 SING N N 14 TRK O5 C16 SING N N 15 TRK O5 C17 SING N N 16 TRK C6 C7 DOUB N E 17 TRK O6 C22 DOUB N N 18 TRK C7 C8 SING N N 19 TRK C8 C9 DOUB N N 20 TRK C9 C10 SING N N 21 TRK C9 C12 SING N N 22 TRK C11 C12 SING N N 23 TRK C14 C15 SING N N 24 TRK C14 C16 SING N E 25 TRK C16 C22 SING N N 26 TRK C17 C18 SING N N 27 TRK C17 C19 SING N N 28 TRK C19 C20 SING N N 29 TRK C19 C21 DOUB N Z 30 TRK C21 C22 SING N N 31 TRK N H SING N N 32 TRK C11 H111 SING N N 33 TRK C11 H112 SING N N 34 TRK C1 H1 SING N N 35 TRK C2 H2 SING N N 36 TRK C14 H14 SING N N 37 TRK C3 H31C SING N N 38 TRK C3 H32C SING N N 39 TRK C3 H33C SING N N 40 TRK C4 H4 SING N N 41 TRK C6 H6 SING N N 42 TRK C13 H131 SING N N 43 TRK C13 H132 SING N N 44 TRK C13 H133 SING N N 45 TRK C16 H16 SING N N 46 TRK C7 H7 SING N N 47 TRK C15 H151 SING N N 48 TRK C15 H152 SING N N 49 TRK C15 H153 SING N N 50 TRK C18 H181 SING N N 51 TRK C18 H182 SING N N 52 TRK C18 H183 SING N N 53 TRK C20 H201 SING N N 54 TRK C20 H202 SING N N 55 TRK C20 H203 SING N N 56 TRK C21 H21 SING N N 57 TRK O4 HO4 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TRK SMILES ACDLabs 12.01 "O=C1/C(C(=O)NC1)=C(/O)\C=C\C(=C\C(C3OC2(OC(C(=O)C=C2C)C3C)C)C)C" TRK SMILES_CANONICAL CACTVS 3.370 "C[C@H](\C=C(C)\C=C\C(O)=C\1C(=O)CNC\1=O)[C@H]2O[C@@]3(C)O[C@@H]([C@@H]2C)C(=O)C=C3C" TRK SMILES CACTVS 3.370 "C[CH](C=C(C)C=CC(O)=C1C(=O)CNC1=O)[CH]2O[C]3(C)O[CH]([CH]2C)C(=O)C=C3C" TRK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[C@H]1[C@H]2C(=O)C=C([C@](O2)(O[C@@H]1[C@H](C)/C=C(\C)/C=C/C(=C/3\C(=O)CNC3=O)/O)C)C" TRK SMILES "OpenEye OEToolkits" 1.7.0 "CC1C2C(=O)C=C(C(O2)(OC1C(C)C=C(C)C=CC(=C3C(=O)CNC3=O)O)C)C" TRK InChI InChI 1.03 "InChI=1S/C22H27NO6/c1-11(6-7-15(24)18-17(26)10-23-21(18)27)8-12(2)19-14(4)20-16(25)9-13(3)22(5,28-19)29-20/h6-9,12,14,19-20,24H,10H2,1-5H3,(H,23,27)/b7-6+,11-8+,18-15-/t12-,14-,19-,20+,22+/m1/s1" TRK InChIKey InChI 1.03 WORJTWSOUPGODS-HYAARBKISA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TRK "SYSTEMATIC NAME" ACDLabs 12.01 "(3Z)-3-{(2E,4E,6R)-1-hydroxy-4-methyl-6-[(1S,3R,4R,5S)-1,4,8-trimethyl-6-oxo-2,9-dioxabicyclo[3.3.1]non-7-en-3-yl]hepta-2,4-dien-1-ylidene}pyrrolidine-2,4-dione" TRK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(3Z)-3-[(2E,4E,6R)-1-hydroxy-4-methyl-6-[(1S,5S,7R,8R)-4,5,8-trimethyl-2-oxo-6,9-dioxabicyclo[3.3.1]non-3-en-7-yl]hepta-2,4-dienylidene]pyrrolidine-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TRK "Create component" 2010-12-23 EBI TRK "Other modification" 2011-03-21 EBI TRK "Modify descriptor" 2011-06-04 RCSB #