data_TRR # _chem_comp.id TRR _chem_comp.name "2,4-DIAMINO-5-(3,4,5-TRIMETHOXY-BENZYL)-PYRIMIDIN-1-IUM" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H19 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2002-05-27 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 291.326 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TRR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1LUD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TRR N1 N1 N 1 1 Y N N 3.949 -4.770 1.234 3.635 1.429 0.331 N1 TRR 1 TRR C2 C2 C 0 1 Y N N 3.850 -3.450 1.614 4.099 0.320 0.888 C2 TRR 2 TRR N2 N2 N 0 1 N N N 4.830 -2.887 2.401 5.132 0.406 1.805 N2 TRR 3 TRR N3 N3 N 0 1 Y N N 2.769 -2.695 1.205 3.600 -0.869 0.588 N3 TRR 4 TRR C4 C4 C 0 1 Y N N 1.787 -3.260 0.416 2.605 -0.985 -0.286 C4 TRR 5 TRR N4 N4 N 0 1 N N N 0.711 -2.504 0.010 2.084 -2.230 -0.598 N4 TRR 6 TRR C5 C5 C 0 1 Y N N 1.886 -4.590 0.033 2.099 0.166 -0.893 C5 TRR 7 TRR C6 C6 C 0 1 Y N N 2.977 -5.342 0.449 2.648 1.387 -0.551 C6 TRR 8 TRR C7 C7 C 0 1 N N N 0.818 -5.211 -0.829 0.974 0.080 -1.892 C7 TRR 9 TRR C11 C11 C 0 1 Y N N 0.749 -6.707 -0.701 -0.345 0.059 -1.164 C11 TRR 10 TRR C12 C12 C 0 1 Y N N 1.099 -7.514 -1.780 -0.995 1.246 -0.882 C12 TRR 11 TRR C13 C13 C 0 1 Y N N 1.036 -8.909 -1.661 -2.209 1.231 -0.212 C13 TRR 12 TRR C14 C14 C 0 1 Y N N 0.623 -9.484 -0.460 -2.769 0.021 0.181 C14 TRR 13 TRR C15 C15 C 0 1 Y N N 0.273 -8.677 0.621 -2.115 -1.170 -0.110 C15 TRR 14 TRR C16 C16 C 0 1 Y N N 0.338 -7.283 0.498 -0.901 -1.146 -0.780 C16 TRR 15 TRR O13 O13 O 0 1 N N N 1.381 -9.731 -2.732 -2.848 2.399 0.066 O13 TRR 16 TRR O14 O14 O 0 1 N N N 0.560 -10.857 -0.341 -3.960 0.002 0.840 O14 TRR 17 TRR O15 O15 O 0 1 N N N -0.133 -9.269 1.816 -2.661 -2.357 0.268 O15 TRR 18 TRR C17 C17 C 0 1 N N N 1.795 -9.144 -3.940 -2.030 3.450 -0.452 C17 TRR 19 TRR C18 C18 C 0 1 N N N 1.739 -11.543 -0.024 -3.661 0.067 2.236 C18 TRR 20 TRR C19 C19 C 0 1 N N N -0.473 -8.448 2.905 -1.762 -3.381 -0.161 C19 TRR 21 TRR H1 H1 H 0 1 N N N 4.720 -5.307 1.527 4.024 2.284 0.574 H1 TRR 22 TRR H21 1H2 H 0 1 N N N 5.611 -3.426 2.699 5.506 1.271 2.034 H21 TRR 23 TRR H22 2H2 H 0 1 N N N 4.767 -1.939 2.679 5.481 -0.398 2.220 H22 TRR 24 TRR H41 1H4 H 0 1 N N N 0.004 -2.900 -0.555 2.446 -3.026 -0.177 H41 TRR 25 TRR H42 2H4 H 0 1 N N N 0.634 -1.558 0.279 1.358 -2.306 -1.236 H42 TRR 26 TRR H6 H6 H 0 1 N N N 3.064 -6.396 0.151 2.277 2.297 -0.999 H6 TRR 27 TRR H71 1H7 H 0 1 N N N 1.012 -4.949 -1.872 1.080 -0.832 -2.480 H71 TRR 28 TRR H72 2H7 H 0 1 N N N -0.146 -4.798 -0.548 1.010 0.945 -2.555 H72 TRR 29 TRR H12 H12 H 0 1 N N N 1.423 -7.055 -2.724 -0.557 2.186 -1.184 H12 TRR 30 TRR H16 H16 H 0 1 N N N 0.063 -6.641 1.348 -0.390 -2.071 -1.003 H16 TRR 31 TRR H171 1H17 H 0 0 N N N 2.298 -9.867 -4.582 -1.053 3.421 0.028 H171 TRR 32 TRR H172 2H17 H 0 0 N N N 2.489 -8.322 -3.766 -1.911 3.321 -1.528 H172 TRR 33 TRR H173 3H17 H 0 0 N N N 0.948 -8.744 -4.498 -2.504 4.411 -0.253 H173 TRR 34 TRR H181 1H18 H 0 0 N N N 1.796 -11.763 1.042 -4.589 0.055 2.807 H181 TRR 35 TRR H182 2H18 H 0 0 N N N 2.622 -10.960 -0.285 -3.050 -0.791 2.517 H182 TRR 36 TRR H183 3H18 H 0 0 N N N 1.803 -12.491 -0.557 -3.116 0.987 2.448 H183 TRR 37 TRR H191 1H19 H 0 0 N N N 0.415 -8.023 3.375 -2.159 -4.356 0.121 H191 TRR 38 TRR H192 2H19 H 0 0 N N N -1.012 -9.006 3.671 -1.649 -3.334 -1.245 H192 TRR 39 TRR H193 3H19 H 0 0 N N N -1.108 -7.618 2.597 -0.791 -3.234 0.312 H193 TRR 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TRR N1 C2 DOUB Y N 1 TRR N1 C6 SING Y N 2 TRR N1 H1 SING N N 3 TRR C2 N2 SING N N 4 TRR C2 N3 SING Y N 5 TRR N2 H21 SING N N 6 TRR N2 H22 SING N N 7 TRR N3 C4 DOUB Y N 8 TRR C4 N4 SING N N 9 TRR C4 C5 SING Y N 10 TRR N4 H41 SING N N 11 TRR N4 H42 SING N N 12 TRR C5 C6 DOUB Y N 13 TRR C5 C7 SING N N 14 TRR C6 H6 SING N N 15 TRR C7 C11 SING N N 16 TRR C7 H71 SING N N 17 TRR C7 H72 SING N N 18 TRR C11 C12 DOUB Y N 19 TRR C11 C16 SING Y N 20 TRR C12 C13 SING Y N 21 TRR C12 H12 SING N N 22 TRR C13 C14 DOUB Y N 23 TRR C13 O13 SING N N 24 TRR C14 C15 SING Y N 25 TRR C14 O14 SING N N 26 TRR C15 C16 DOUB Y N 27 TRR C15 O15 SING N N 28 TRR C16 H16 SING N N 29 TRR O13 C17 SING N N 30 TRR O14 C18 SING N N 31 TRR O15 C19 SING N N 32 TRR C17 H171 SING N N 33 TRR C17 H172 SING N N 34 TRR C17 H173 SING N N 35 TRR C18 H181 SING N N 36 TRR C18 H182 SING N N 37 TRR C18 H183 SING N N 38 TRR C19 H191 SING N N 39 TRR C19 H192 SING N N 40 TRR C19 H193 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TRR SMILES ACDLabs 10.04 "O(c1cc(cc(OC)c1OC)Cc2c(nc(N)[nH+]c2)N)C" TRR SMILES_CANONICAL CACTVS 3.341 "COc1cc(Cc2c[nH+]c(N)nc2N)cc(OC)c1OC" TRR SMILES CACTVS 3.341 "COc1cc(Cc2c[nH+]c(N)nc2N)cc(OC)c1OC" TRR SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "COc1cc(cc(c1OC)OC)Cc2c[nH+]c(nc2N)N" TRR SMILES "OpenEye OEToolkits" 1.5.0 "COc1cc(cc(c1OC)OC)Cc2c[nH+]c(nc2N)N" TRR InChI InChI 1.03 "InChI=1S/C14H18N4O3/c1-19-10-5-8(6-11(20-2)12(10)21-3)4-9-7-17-14(16)18-13(9)15/h5-7H,4H2,1-3H3,(H4,15,16,17,18)/p+1" TRR InChIKey InChI 1.03 IEDVJHCEMCRBQM-UHFFFAOYSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TRR "SYSTEMATIC NAME" ACDLabs 10.04 "2,4-diamino-5-(3,4,5-trimethoxybenzyl)pyrimidin-1-ium" TRR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "5-[(3,4,5-trimethoxyphenyl)methyl]pyrimidin-1-ium-2,4-diamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TRR "Create component" 2002-05-27 EBI TRR "Modify descriptor" 2011-06-04 RCSB #