data_TTE
#
_chem_comp.id TTE
_chem_comp.name "PHOSPHOMETHYL PHOSPHONIC ACID DEOXYTHYMIDYLATE ESTER"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H19 N2 O13 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2001-01-16
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 480.195
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code TTE
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1HUO
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TTE N1 N1 N 0 1 N N N -22.776 34.717 58.413 0.172 0.443 -5.001 N1 TTE 1
TTE C2 C2 C 0 1 N N N -22.911 34.576 57.084 0.534 -0.844 -4.857 C2 TTE 2
TTE O2 O2 O 0 1 N N N -24.044 34.494 56.590 -0.061 -1.550 -4.066 O2 TTE 3
TTE N3 N3 N 0 1 N N N -21.862 34.521 56.274 1.546 -1.363 -5.578 N3 TTE 4
TTE C4 C4 C 0 1 N N N -20.577 34.596 56.689 2.213 -0.595 -6.463 C4 TTE 5
TTE O4 O4 O 0 1 N N N -19.638 34.538 55.938 3.129 -1.063 -7.115 O4 TTE 6
TTE C5 C5 C 0 1 N N N -20.417 34.758 58.174 1.846 0.762 -6.620 C5 TTE 7
TTE C5M C5M C 0 1 N N N -19.052 34.863 58.763 2.578 1.643 -7.599 C5M TTE 8
TTE C6 C6 C 0 1 N N N -21.521 34.805 58.927 0.827 1.256 -5.885 C6 TTE 9
TTE "C1'" C1* C 0 1 N N R -23.894 34.763 59.243 -0.933 0.979 -4.203 "C1'" TTE 10
TTE "C2'" C2* C 0 1 N N N -23.820 33.796 60.429 -2.223 0.190 -4.500 "C2'" TTE 11
TTE "C3'" C3* C 0 1 N N S -23.302 34.665 61.563 -2.649 -0.372 -3.122 "C3'" TTE 12
TTE "O3'" O3* O 0 1 N N N -23.793 34.164 62.799 -4.064 -0.278 -2.948 "O3'" TTE 13
TTE "C4'" C4* C 0 1 N N R -23.778 36.058 61.395 -1.906 0.571 -2.142 "C4'" TTE 14
TTE "O4'" O4* O 0 1 N N N -24.116 35.985 59.789 -0.646 0.824 -2.803 "O4'" TTE 15
TTE "C5'" C5* C 0 1 N N N -22.729 37.118 61.703 -1.684 -0.117 -0.794 "C5'" TTE 16
TTE "O5'" O5* O 0 1 N N N -21.420 36.543 61.834 -0.999 0.772 0.088 "O5'" TTE 17
TTE PA PA P 0 1 N N S -20.364 36.947 63.011 -0.799 -0.013 1.479 PA TTE 18
TTE O1A O1A O 0 1 N N N -20.904 38.094 63.984 -0.000 -1.237 1.243 O1A TTE 19
TTE O2A O2A O 0 1 N N N -18.975 37.192 62.234 -2.237 -0.418 2.078 O2A TTE 20
TTE O3A O3A O 0 1 N N N -20.153 35.550 63.801 -0.029 0.936 2.526 O3A TTE 21
TTE PB PB P 0 1 N N R -20.970 34.798 64.991 0.135 0.091 3.887 PB TTE 22
TTE O1B O1B O 0 1 N N N -21.477 33.460 64.237 0.919 -1.134 3.614 O1B TTE 23
TTE O2B O2B O 0 1 N N N -22.270 35.701 65.221 -1.318 -0.315 4.445 O2B TTE 24
TTE CC CC C 0 1 N N N -19.577 34.166 66.028 1.003 1.103 5.130 CC TTE 25
TTE PG PG P 0 1 N N N -18.641 35.616 66.704 1.189 0.146 6.670 PG TTE 26
TTE O1G O1G O 0 1 N N N -18.812 36.709 65.521 1.973 -1.078 6.398 O1G TTE 27
TTE O2G O2G O 0 1 N N N -19.537 36.181 67.909 1.956 1.040 7.768 O2G TTE 28
TTE O3G O3G O 0 1 N N N -17.113 35.147 66.467 -0.264 -0.259 7.229 O3G TTE 29
TTE HN3 HN3 H 0 1 N N N -22.053 34.415 55.277 1.794 -2.293 -5.462 HN3 TTE 30
TTE H5M1 1H5M H 0 0 N N N -18.933 34.983 59.865 3.361 1.066 -8.092 H5M1 TTE 31
TTE H5M2 2H5M H 0 0 N N N -18.456 33.978 58.436 1.878 2.017 -8.346 H5M2 TTE 32
TTE H5M3 3H5M H 0 0 N N N -18.510 35.694 58.255 3.026 2.483 -7.068 H5M3 TTE 33
TTE H6 H6 H 0 1 N N N -21.391 34.921 60.016 0.530 2.289 -5.994 H6 TTE 34
TTE "H1'" H1* H 0 1 N N N -24.717 34.479 58.546 -1.081 2.033 -4.437 "H1'" TTE 35
TTE "H2'1" 1H2* H 0 0 N N N -24.774 33.265 60.652 -2.993 0.853 -4.895 "H2'1" TTE 36
TTE "H2'2" 2H2* H 0 0 N N N -23.217 32.877 60.239 -2.022 -0.621 -5.198 "H2'2" TTE 37
TTE "H3'" H3* H 0 1 N N N -22.187 34.647 61.551 -2.311 -1.401 -3.001 "H3'" TTE 38
TTE "HO'3" 3HO* H 0 0 N N N -23.469 34.707 63.507 -4.468 -0.814 -3.644 "HO'3" TTE 39
TTE "H4'" H4* H 0 1 N N N -24.607 36.355 62.077 -2.461 1.500 -2.009 "H4'" TTE 40
TTE "H5'1" 1H5* H 0 0 N N N -22.740 37.935 60.944 -2.647 -0.389 -0.361 "H5'1" TTE 41
TTE "H5'2" 2H5* H 0 0 N N N -23.004 37.713 62.604 -1.085 -1.016 -0.941 "H5'2" TTE 42
TTE HOA2 2HOA H 0 0 N N N -18.360 37.427 62.919 -2.724 0.405 2.216 HOA2 TTE 43
TTE HOB2 2HOB H 0 0 N N N -22.746 35.262 65.915 -1.795 0.509 4.610 HOB2 TTE 44
TTE HCC1 1HCC H 0 0 N N N -19.920 33.468 66.827 1.987 1.378 4.751 HCC1 TTE 45
TTE HCC2 2HCC H 0 0 N N N -18.921 33.453 65.475 0.425 2.006 5.330 HCC2 TTE 46
TTE HOG2 2HOG H 0 0 N N N -19.057 36.924 68.255 2.033 0.498 8.565 HOG2 TTE 47
TTE HOG3 3HOG H 0 0 N N N -16.633 35.890 66.813 -0.741 0.565 7.393 HOG3 TTE 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TTE N1 C2 SING N N 1
TTE N1 C6 SING N N 2
TTE N1 "C1'" SING N N 3
TTE C2 O2 DOUB N N 4
TTE C2 N3 SING N N 5
TTE N3 C4 SING N N 6
TTE N3 HN3 SING N N 7
TTE C4 O4 DOUB N N 8
TTE C4 C5 SING N N 9
TTE C5 C5M SING N N 10
TTE C5 C6 DOUB N N 11
TTE C5M H5M1 SING N N 12
TTE C5M H5M2 SING N N 13
TTE C5M H5M3 SING N N 14
TTE C6 H6 SING N N 15
TTE "C1'" "C2'" SING N N 16
TTE "C1'" "O4'" SING N N 17
TTE "C1'" "H1'" SING N N 18
TTE "C2'" "C3'" SING N N 19
TTE "C2'" "H2'1" SING N N 20
TTE "C2'" "H2'2" SING N N 21
TTE "C3'" "O3'" SING N N 22
TTE "C3'" "C4'" SING N N 23
TTE "C3'" "H3'" SING N N 24
TTE "O3'" "HO'3" SING N N 25
TTE "C4'" "O4'" SING N N 26
TTE "C4'" "C5'" SING N N 27
TTE "C4'" "H4'" SING N N 28
TTE "C5'" "O5'" SING N N 29
TTE "C5'" "H5'1" SING N N 30
TTE "C5'" "H5'2" SING N N 31
TTE "O5'" PA SING N N 32
TTE PA O1A DOUB N N 33
TTE PA O2A SING N N 34
TTE PA O3A SING N N 35
TTE O2A HOA2 SING N N 36
TTE O3A PB SING N N 37
TTE PB O1B DOUB N N 38
TTE PB O2B SING N N 39
TTE PB CC SING N N 40
TTE O2B HOB2 SING N N 41
TTE CC PG SING N N 42
TTE CC HCC1 SING N N 43
TTE CC HCC2 SING N N 44
TTE PG O1G DOUB N N 45
TTE PG O2G SING N N 46
TTE PG O3G SING N N 47
TTE O2G HOG2 SING N N 48
TTE O3G HOG3 SING N N 49
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TTE SMILES ACDLabs 10.04 "O=P(O)(O)CP(=O)(O)OP(=O)(O)OCC2OC(N1C(=O)NC(=O)C(=C1)C)CC2O"
TTE SMILES_CANONICAL CACTVS 3.341 "CC1=CN([C@H]2C[C@H](O)[C@@H](CO[P@@](O)(=O)O[P@@](O)(=O)C[P](O)(O)=O)O2)C(=O)NC1=O"
TTE SMILES CACTVS 3.341 "CC1=CN([CH]2C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)C[P](O)(O)=O)O2)C(=O)NC1=O"
TTE SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CO[P@](=O)(O)O[P@@](=O)(CP(=O)(O)O)O)O"
TTE SMILES "OpenEye OEToolkits" 1.5.0 "CC1=CN(C(=O)NC1=O)C2CC(C(O2)COP(=O)(O)OP(=O)(CP(=O)(O)O)O)O"
TTE InChI InChI 1.03 "InChI=1S/C11H19N2O13P3/c1-6-3-13(11(16)12-10(6)15)9-2-7(14)8(25-9)4-24-29(22,23)26-28(20,21)5-27(17,18)19/h3,7-9,14H,2,4-5H2,1H3,(H,20,21)(H,22,23)(H,12,15,16)(H2,17,18,19)/t7-,8+,9+/m0/s1"
TTE InChIKey InChI 1.03 HEDAITKJNKXWIZ-DJLDLDEBSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TTE "SYSTEMATIC NAME" ACDLabs 10.04 "5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]thymidine"
TTE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[hydroxy-[hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-pyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl]oxy-phosphoryl]methylphosphonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TTE "Create component" 2001-01-16 PDBJ
TTE "Modify descriptor" 2011-06-04 RCSB
#