data_TUB # _chem_comp.id TUB _chem_comp.name "(1beta,1'alpha)-7',12'-dihydroxy-6,6'-dimethoxy-2,2',2'-trimethyltubocuraran-2'-ium" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C37 H41 N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms d-tubocurarine _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2010-11-23 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 609.731 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TUB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3PMZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TUB C1 C1 C 0 1 Y N N 8.173 1.399 -7.984 4.242 -1.567 -0.285 C1 TUB 1 TUB C2 C2 C 0 1 Y N N 7.605 2.343 -7.115 3.176 -1.081 0.475 C2 TUB 2 TUB C3 C3 C 0 1 Y N N 6.241 2.295 -6.799 3.143 0.272 0.789 C3 TUB 3 TUB C4 C4 C 0 1 Y N N 5.434 1.310 -7.308 4.150 1.120 0.359 C4 TUB 4 TUB C5 C5 C 0 1 Y N N 6.021 0.317 -8.178 5.207 0.634 -0.381 C5 TUB 5 TUB C6 C6 C 0 1 Y N N 7.356 0.368 -8.497 5.246 -0.712 -0.706 C6 TUB 6 TUB C7 C7 C 0 1 N N S 4.056 1.432 -6.816 4.059 2.576 0.714 C7 TUB 7 TUB N8 N8 N 0 1 N N N 3.194 0.527 -7.599 5.394 3.222 0.747 N8 TUB 8 TUB C9 C9 C 0 1 N N N 3.873 -0.700 -8.106 6.057 2.998 -0.558 C9 TUB 9 TUB C10 C10 C 0 1 N N N 5.049 -0.460 -9.063 6.324 1.532 -0.830 C10 TUB 10 TUB C11 C11 C 0 1 Y N N 6.727 3.210 0.522 -3.821 2.349 -0.195 C11 TUB 11 TUB C12 C12 C 0 1 Y N N 6.493 4.037 1.686 -5.197 2.355 -0.407 C12 TUB 12 TUB C13 C13 C 0 1 Y N N 6.857 5.378 1.673 -5.900 1.162 -0.369 C13 TUB 13 TUB C14 C14 C 0 1 Y N N 7.483 5.871 0.540 -5.240 -0.034 -0.116 C14 TUB 14 TUB C15 C15 C 0 1 Y N N 7.731 5.072 -0.564 -3.886 -0.044 0.094 C15 TUB 15 TUB C16 C16 C 0 1 Y N N 7.315 3.742 -0.579 -3.159 1.170 0.054 C16 TUB 16 TUB C17 C17 C 0 1 N N N 7.898 7.313 0.539 -6.055 -1.299 -0.061 C17 TUB 17 TUB C18 C18 C 0 1 N N N 8.860 7.751 -0.569 -5.146 -2.524 -0.027 C18 TUB 18 TUB C20 C20 C 0 1 N N S 8.283 5.817 -1.732 -3.097 -1.308 0.379 C20 TUB 19 TUB O21 O21 O 0 1 N N N 8.349 3.451 -6.514 2.213 -1.903 0.905 O21 TUB 20 TUB C22 C22 C 0 1 Y N N 8.361 4.991 -6.562 1.165 -2.469 0.293 C22 TUB 21 TUB C23 C23 C 0 1 N N N 4.026 0.741 -5.425 3.178 3.322 -0.299 C23 TUB 22 TUB C24 C24 C 0 1 Y N N 4.979 1.309 -4.389 1.785 2.758 -0.190 C24 TUB 23 TUB C25 C25 C 0 1 Y N N 8.342 4.831 -5.164 -0.012 -1.785 0.030 C25 TUB 24 TUB C26 C26 C 0 1 Y N N 7.927 5.860 -4.356 -1.059 -2.408 -0.614 C26 TUB 25 TUB C27 C27 C 0 1 Y N N 7.542 7.085 -4.915 -0.929 -3.726 -1.028 C27 TUB 26 TUB C28 C28 C 0 1 Y N N 7.555 7.273 -6.287 0.219 -4.433 -0.740 C28 TUB 27 TUB C29 C29 C 0 1 Y N N 7.987 6.227 -7.114 1.263 -3.820 -0.073 C29 TUB 28 TUB C30 C30 C 0 1 Y N N 4.553 2.333 -3.545 1.197 2.684 1.062 C30 TUB 29 TUB C31 C31 C 0 1 Y N N 5.385 2.887 -2.591 -0.048 2.122 1.205 C31 TUB 30 TUB C32 C32 C 0 1 Y N N 7.155 1.388 -3.376 -0.164 1.774 -1.172 C32 TUB 31 TUB C33 C33 C 0 1 Y N N 6.281 0.818 -4.284 1.097 2.331 -1.308 C33 TUB 32 TUB O34 O34 O 0 1 N N N 7.561 2.866 -1.617 -1.871 1.010 0.278 O34 TUB 33 TUB C35 C35 C 0 1 N N N 8.137 5.045 -3.049 -2.356 -1.701 -0.896 C35 TUB 34 TUB O36 O36 O 0 1 N N N 5.859 3.441 2.724 -5.847 3.525 -0.650 O36 TUB 35 TUB O37 O37 O 0 1 N N N 9.556 1.400 -8.394 4.307 -2.884 -0.616 O37 TUB 36 TUB O38 O38 O 0 1 N N N 7.904 6.386 -8.532 2.374 -4.536 0.244 O38 TUB 37 TUB C39 C39 C 0 1 Y N N 6.687 2.390 -2.538 -0.725 1.633 0.091 C39 TUB 38 TUB C40 C40 C 0 1 N N N 10.595 5.979 -0.876 -3.309 -3.605 1.033 C40 TUB 39 TUB C41 C41 C 0 1 N N N 9.900 7.464 -2.605 -4.495 -1.919 2.197 C41 TUB 40 TUB C42 C42 C 0 1 N N N 2.528 1.224 -8.698 6.199 2.544 1.802 C42 TUB 41 TUB O43 O43 O 0 1 N N N 6.299 1.923 0.550 -3.130 3.521 -0.232 O43 TUB 42 TUB C45 C45 C 0 1 N N N 5.419 4.260 3.817 -7.259 3.452 -0.858 C45 TUB 43 TUB C46 C46 C 0 1 N N N 10.027 0.285 -9.181 5.429 -3.302 -1.397 C46 TUB 44 TUB H3 H3 H 0 1 N N N 5.819 3.044 -6.145 2.328 0.661 1.381 H3 TUB 45 TUB H6 H6 H 0 1 N N N 7.783 -0.384 -9.144 6.068 -1.099 -1.289 H6 TUB 46 TUB H7 H7 H 0 1 N N N 3.747 2.487 -6.843 3.614 2.662 1.705 H7 TUB 47 TUB H9 H9 H 0 1 N N N 4.263 -1.246 -7.234 5.428 3.412 -1.346 H9 TUB 48 TUB H9A H9A H 0 1 N N N 3.122 -1.293 -8.648 7.007 3.542 -0.550 H9A TUB 49 TUB H10 H10 H 0 1 N N N 4.749 0.115 -9.951 7.249 1.226 -0.341 H10 TUB 50 TUB H10A H10A H 0 0 N N N 5.484 -1.402 -9.428 6.459 1.395 -1.909 H10A TUB 51 TUB H13 H13 H 0 1 N N N 6.658 6.017 2.521 -6.968 1.155 -0.531 H13 TUB 52 TUB H17 H17 H 0 1 N N N 6.983 7.914 0.430 -6.712 -1.278 0.811 H17 TUB 53 TUB H18 H18 H 0 1 N N N 8.299 8.429 -1.229 -4.779 -2.739 -1.035 H18 TUB 54 TUB H20 H20 H 0 1 N N N 7.634 6.665 -1.997 -2.359 -1.078 1.159 H20 TUB 55 TUB H23 H23 H 0 1 N N N 3.006 0.844 -5.027 3.163 4.385 -0.069 H23 TUB 56 TUB H23A H23A H 0 0 N N N 4.293 -0.315 -5.575 3.556 3.162 -1.309 H23A TUB 57 TUB H25 H25 H 0 1 N N N 8.655 3.895 -4.725 -0.108 -0.754 0.337 H25 TUB 58 TUB H27 H27 H 0 1 N N N 7.231 7.892 -4.269 -1.738 -4.200 -1.564 H27 TUB 59 TUB H28 H28 H 0 1 N N N 7.237 8.213 -6.714 0.307 -5.466 -1.044 H28 TUB 60 TUB H30 H30 H 0 1 N N N 3.543 2.704 -3.639 1.716 3.072 1.926 H30 TUB 61 TUB H31 H31 H 0 1 N N N 5.045 3.664 -1.922 -0.502 2.060 2.183 H31 TUB 62 TUB H32 H32 H 0 1 N N N 8.182 1.059 -3.320 -0.703 1.435 -2.044 H32 TUB 63 TUB H33 H33 H 0 1 N N N 6.604 -0.002 -4.908 1.538 2.434 -2.289 H33 TUB 64 TUB H35 H35 H 0 1 N N N 7.257 4.394 -2.938 -2.989 -2.342 -1.513 H35 TUB 65 TUB H35A H35A H 0 0 N N N 9.064 4.468 -3.182 -2.140 -0.793 -1.472 H35A TUB 66 TUB HO38 HO38 H 0 0 N N N 7.640 7.275 -8.736 2.325 -4.977 1.103 HO38 TUB 67 TUB H40 H40 H 0 1 N N N 10.939 5.223 -1.598 -2.497 -3.484 1.751 H40 TUB 68 TUB H40A H40A H 0 0 N N N 11.408 6.693 -0.678 -2.901 -3.924 0.075 H40A TUB 69 TUB H40B H40B H 0 0 N N N 10.304 5.484 0.062 -4.008 -4.356 1.400 H40B TUB 70 TUB H41 H41 H 0 1 N N N 10.358 6.780 -3.334 -5.012 -0.962 2.118 H41 TUB 71 TUB H41A H41A H 0 0 N N N 9.043 7.974 -3.070 -3.649 -1.820 2.878 H41A TUB 72 TUB H41B H41B H 0 0 N N N 10.642 8.211 -2.286 -5.182 -2.674 2.578 H41B TUB 73 TUB H42 H42 H 0 1 N N N 1.897 0.515 -9.254 6.296 1.485 1.561 H42 TUB 74 TUB H42A H42A H 0 0 N N N 1.901 2.032 -8.293 7.189 2.997 1.851 H42A TUB 75 TUB H42B H42B H 0 0 N N N 3.284 1.650 -9.374 5.701 2.654 2.765 H42B TUB 76 TUB HO43 HO43 H 0 0 N N N 6.516 1.499 -0.272 -3.064 3.966 0.624 HO43 TUB 77 TUB H45 H45 H 0 1 N N N 4.927 3.630 4.573 -7.467 2.818 -1.719 H45 TUB 78 TUB H45A H45A H 0 0 N N N 6.286 4.765 4.269 -7.735 3.030 0.027 H45A TUB 79 TUB H45B H45B H 0 0 N N N 4.707 5.013 3.447 -7.651 4.452 -1.040 H45B TUB 80 TUB H46 H46 H 0 1 N N N 11.092 0.425 -9.416 5.435 -2.761 -2.343 H46 TUB 81 TUB H46A H46A H 0 0 N N N 9.897 -0.647 -8.611 6.350 -3.090 -0.852 H46A TUB 82 TUB H46B H46B H 0 0 N N N 9.450 0.227 -10.116 5.359 -4.372 -1.590 H46B TUB 83 TUB N19 N19 N 1 1 N N N 9.438 6.696 -1.430 -4.008 -2.325 0.866 N19 TUB 84 TUB H401 H401 H 0 0 N N N 8.399 7.507 1.499 -6.691 -1.348 -0.956 H401 TUB 85 TUB H411 H411 H 0 0 N N N 9.703 8.259 -0.077 -5.720 -3.394 0.316 H411 TUB 86 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TUB C1 C2 SING Y N 1 TUB C2 C3 DOUB Y N 2 TUB C2 O21 SING N N 3 TUB C3 H3 SING N N 4 TUB C4 C3 SING Y N 5 TUB C4 C7 SING N N 6 TUB C5 C4 DOUB Y N 7 TUB C6 C1 DOUB Y N 8 TUB C6 C5 SING Y N 9 TUB C6 H6 SING N N 10 TUB C7 C23 SING N N 11 TUB C7 H7 SING N N 12 TUB N8 C7 SING N N 13 TUB C9 N8 SING N N 14 TUB C9 H9 SING N N 15 TUB C9 H9A SING N N 16 TUB C10 C5 SING N N 17 TUB C10 C9 SING N N 18 TUB C10 H10 SING N N 19 TUB C10 H10A SING N N 20 TUB C11 O43 SING N N 21 TUB C11 C12 SING Y N 22 TUB C12 O36 SING N N 23 TUB C13 C12 DOUB Y N 24 TUB C13 H13 SING N N 25 TUB C14 C13 SING Y N 26 TUB C15 C14 DOUB Y N 27 TUB C16 C11 DOUB Y N 28 TUB C16 C15 SING Y N 29 TUB C17 C14 SING N N 30 TUB C17 H17 SING N N 31 TUB C18 C17 SING N N 32 TUB C18 H18 SING N N 33 TUB N19 C18 SING N N 34 TUB N19 C40 SING N N 35 TUB C20 C15 SING N N 36 TUB C20 N19 SING N N 37 TUB C20 H20 SING N N 38 TUB C22 O21 SING N N 39 TUB C22 C25 SING Y N 40 TUB C23 C24 SING N N 41 TUB C23 H23 SING N N 42 TUB C23 H23A SING N N 43 TUB C24 C33 DOUB Y N 44 TUB C24 C30 SING Y N 45 TUB C25 C26 DOUB Y N 46 TUB C25 H25 SING N N 47 TUB C26 C35 SING N N 48 TUB C27 C26 SING Y N 49 TUB C27 H27 SING N N 50 TUB C28 C27 DOUB Y N 51 TUB C28 H28 SING N N 52 TUB C29 C22 DOUB Y N 53 TUB C29 C28 SING Y N 54 TUB C30 C31 DOUB Y N 55 TUB C30 H30 SING N N 56 TUB C31 C39 SING Y N 57 TUB C31 H31 SING N N 58 TUB C32 C39 DOUB Y N 59 TUB C32 H32 SING N N 60 TUB C33 C32 SING Y N 61 TUB C33 H33 SING N N 62 TUB O34 C16 SING N N 63 TUB C35 C20 SING N N 64 TUB C35 H35 SING N N 65 TUB C35 H35A SING N N 66 TUB O36 C45 SING N N 67 TUB O37 C1 SING N N 68 TUB O38 C29 SING N N 69 TUB O38 HO38 SING N N 70 TUB C39 O34 SING N N 71 TUB C40 H40 SING N N 72 TUB C40 H40A SING N N 73 TUB C40 H40B SING N N 74 TUB C41 N19 SING N N 75 TUB C41 H41 SING N N 76 TUB C41 H41A SING N N 77 TUB C41 H41B SING N N 78 TUB C42 N8 SING N N 79 TUB C42 H42 SING N N 80 TUB C42 H42A SING N N 81 TUB C42 H42B SING N N 82 TUB O43 HO43 SING N N 83 TUB C45 H45 SING N N 84 TUB C45 H45A SING N N 85 TUB C45 H45B SING N N 86 TUB C46 O37 SING N N 87 TUB C46 H46 SING N N 88 TUB C46 H46A SING N N 89 TUB C46 H46B SING N N 90 TUB C17 H401 SING N N 91 TUB C18 H411 SING N N 92 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TUB SMILES ACDLabs 12.01 "Oc7ccc5cc7Oc1cc2c(cc1OC)CCN(C2Cc6ccc(Oc3c4c(cc(OC)c3O)CC[N+](C)(C)C4C5)cc6)C" TUB SMILES_CANONICAL CACTVS 3.370 "COc1cc2CC[N+](C)(C)[C@H]3Cc4ccc(O)c(Oc5cc6[C@H](Cc7ccc(Oc(c1O)c23)cc7)N(C)CCc6cc5OC)c4" TUB SMILES CACTVS 3.370 "COc1cc2CC[N+](C)(C)[CH]3Cc4ccc(O)c(Oc5cc6[CH](Cc7ccc(Oc(c1O)c23)cc7)N(C)CCc6cc5OC)c4" TUB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[N@]1CCc2cc(c3cc2[C@@H]1Cc4ccc(cc4)Oc5c6c(cc(c5O)OC)CC[N+]([C@H]6Cc7ccc(c(c7)O3)O)(C)C)OC" TUB SMILES "OpenEye OEToolkits" 1.7.0 "CN1CCc2cc(c3cc2C1Cc4ccc(cc4)Oc5c6c(cc(c5O)OC)CC[N+](C6Cc7ccc(c(c7)O3)O)(C)C)OC" TUB InChI InChI 1.03 "InChI=1S/C37H40N2O6/c1-38-14-12-24-19-32(42-4)33-21-27(24)28(38)16-22-6-9-26(10-7-22)44-37-35-25(20-34(43-5)36(37)41)13-15-39(2,3)29(35)17-23-8-11-30(40)31(18-23)45-33/h6-11,18-21,28-29H,12-17H2,1-5H3,(H-,40,41)/p+1/t28-,29-/m0/s1" TUB InChIKey InChI 1.03 JFJZZMVDLULRGK-VMPREFPWSA-O # _pdbx_chem_comp_identifier.comp_id TUB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "(1beta,1'alpha)-7',12'-dihydroxy-6,6'-dimethoxy-2,2',2'-trimethyltubocuraran-2'-ium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TUB "Create component" 2010-11-23 RCSB TUB "Other modification" 2010-12-03 RCSB TUB "Modify descriptor" 2011-06-04 RCSB TUB "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id TUB _pdbx_chem_comp_synonyms.name d-tubocurarine _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##