data_TVG # _chem_comp.id TVG _chem_comp.name "propyl beta-D-galactofuranoside" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C9 H18 O6" _chem_comp.mon_nstd_parent_comp_id GZL _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-01 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 222.236 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TVG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5LSH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TVG O3 O3 O 0 1 N N N -8.186 10.477 6.425 2.098 2.488 1.132 O3 TVG 1 TVG C3 C3 C 0 1 N N R -9.542 10.314 6.831 1.546 1.573 0.183 C3 TVG 2 TVG C2 C2 C 0 1 N N R -10.511 9.991 5.696 0.075 1.938 -0.130 C2 TVG 3 TVG O2 O2 O 0 1 N N N -10.650 8.580 5.528 -0.027 2.611 -1.387 O2 TVG 4 TVG C1 C1 C 0 1 N N R -11.839 10.573 6.156 -0.599 0.544 -0.192 C1 TVG 5 TVG O1 O1 O 0 1 N N N -12.524 11.191 5.096 -1.997 0.648 0.089 O1 TVG 6 TVG O4 O4 O 0 1 N N N -11.520 11.323 7.340 0.074 -0.202 0.845 O4 TVG 7 TVG C4 C4 C 0 1 N N S -10.110 11.604 7.402 1.464 0.156 0.784 C4 TVG 8 TVG C5 C5 C 0 1 N N R -9.547 11.900 8.794 2.218 -0.832 -0.108 C5 TVG 9 TVG O5 O5 O 0 1 N N N -9.907 10.839 9.689 1.659 -0.810 -1.423 O5 TVG 10 TVG C6 C6 C 0 1 N N N -9.928 13.265 9.358 2.096 -2.241 0.475 C6 TVG 11 TVG O6 O6 O 0 1 N N N -11.343 13.408 9.412 2.895 -3.145 -0.291 O6 TVG 12 TVG C7 C7 C 0 1 N N N -12.754 10.450 3.893 -2.712 -0.580 -0.059 C7 TVG 13 TVG C8 C8 C 0 1 N N N -13.910 10.979 3.045 -4.190 -0.352 0.265 C8 TVG 14 TVG C9 C9 C 0 1 N N N -13.938 12.493 3.088 -4.956 -1.667 0.106 C9 TVG 15 TVG H3 H3 H 0 1 N N N -9.616 9.525 7.594 2.142 1.566 -0.730 H3 TVG 16 TVG H2 H2 H 0 1 N N N -10.183 10.480 4.767 -0.354 2.543 0.669 H2 TVG 17 TVG HO2 HO2 H 0 1 N Y N -9.823 8.212 5.241 -0.937 2.780 -1.669 HO2 TVG 18 TVG H1 H1 H 0 1 N N N -12.447 9.715 6.478 -0.436 0.082 -1.166 H1 TVG 19 TVG H4 H4 H 0 1 N N N -9.858 12.437 6.729 1.892 0.154 1.787 H4 TVG 20 TVG H5 H5 H 0 1 N N N -8.451 11.896 8.695 3.270 -0.549 -0.156 H5 TVG 21 TVG HO5 HO5 H 0 1 N Y N -9.558 11.021 10.554 0.758 -1.159 -1.472 HO5 TVG 22 TVG H61 H61 H 0 1 N N N -9.516 13.365 10.373 2.441 -2.238 1.509 H61 TVG 23 TVG H62 H62 H 0 1 N N N -9.510 14.052 8.713 1.054 -2.559 0.441 H62 TVG 24 TVG HO6 HO6 H 0 1 N Y N -11.562 14.262 9.765 2.865 -4.059 0.022 HO6 TVG 25 TVG H71 H71 H 0 1 N N N -12.975 9.408 4.166 -2.616 -0.935 -1.086 H71 TVG 26 TVG H72 H72 H 0 1 N N N -11.837 10.483 3.286 -2.301 -1.325 0.623 H72 TVG 27 TVG H82 H82 H 0 1 N N N -14.859 10.586 3.439 -4.286 0.003 1.291 H82 TVG 28 TVG H81 H81 H 0 1 N N N -13.779 10.647 2.004 -4.601 0.393 -0.417 H81 TVG 29 TVG H91 H91 H 0 1 N N N -14.773 12.862 2.475 -4.860 -2.022 -0.920 H91 TVG 30 TVG H92 H92 H 0 1 N N N -14.070 12.828 4.127 -4.545 -2.411 0.788 H92 TVG 31 TVG H93 H93 H 0 1 N N N -12.991 12.888 2.693 -6.009 -1.504 0.337 H93 TVG 32 TVG HO3 HO3 H 0 1 N Y N -7.649 10.675 7.184 2.172 3.395 0.806 HO3 TVG 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TVG C8 C9 SING N N 1 TVG C8 C7 SING N N 2 TVG C7 O1 SING N N 3 TVG O1 C1 SING N N 4 TVG O2 C2 SING N N 5 TVG C2 C1 SING N N 6 TVG C2 C3 SING N N 7 TVG C1 O4 SING N N 8 TVG O3 C3 SING N N 9 TVG C3 C4 SING N N 10 TVG O4 C4 SING N N 11 TVG C4 C5 SING N N 12 TVG C5 C6 SING N N 13 TVG C5 O5 SING N N 14 TVG C6 O6 SING N N 15 TVG C3 H3 SING N N 16 TVG C2 H2 SING N N 17 TVG O2 HO2 SING N N 18 TVG C1 H1 SING N N 19 TVG C4 H4 SING N N 20 TVG C5 H5 SING N N 21 TVG O5 HO5 SING N N 22 TVG C6 H61 SING N N 23 TVG C6 H62 SING N N 24 TVG O6 HO6 SING N N 25 TVG C7 H71 SING N N 26 TVG C7 H72 SING N N 27 TVG C8 H82 SING N N 28 TVG C8 H81 SING N N 29 TVG C9 H91 SING N N 30 TVG C9 H92 SING N N 31 TVG C9 H93 SING N N 32 TVG O3 HO3 SING N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TVG SMILES ACDLabs 12.01 "OC1C(OC(C1O)OCCC)C(CO)O" TVG InChI InChI 1.03 "InChI=1S/C9H18O6/c1-2-3-14-9-7(13)6(12)8(15-9)5(11)4-10/h5-13H,2-4H2,1H3/t5-,6-,7-,8+,9-/m1/s1" TVG InChIKey InChI 1.03 HCLWENMJMONBDC-GOFVFXDOSA-N TVG SMILES_CANONICAL CACTVS 3.385 "CCCO[C@@H]1O[C@@H]([C@H](O)CO)[C@H](O)[C@H]1O" TVG SMILES CACTVS 3.385 "CCCO[CH]1O[CH]([CH](O)CO)[CH](O)[CH]1O" TVG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCO[C@H]1[C@@H]([C@H]([C@@H](O1)[C@@H](CO)O)O)O" TVG SMILES "OpenEye OEToolkits" 2.0.7 "CCCOC1C(C(C(O1)C(CO)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TVG "SYSTEMATIC NAME" ACDLabs 12.01 "propyl beta-D-galactofuranoside" TVG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},3~{R},4~{R},5~{R})-2-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-propoxy-oxolane-3,4-diol" # _pdbx_chem_comp_related.comp_id TVG _pdbx_chem_comp_related.related_comp_id GZL _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 TVG C1 GZL C1 "Carbohydrate core" 2 TVG C2 GZL C2 "Carbohydrate core" 3 TVG C3 GZL C3 "Carbohydrate core" 4 TVG C4 GZL C4 "Carbohydrate core" 5 TVG C5 GZL C5 "Carbohydrate core" 6 TVG C6 GZL C6 "Carbohydrate core" 7 TVG O1 GZL O1 "Carbohydrate core" 8 TVG O2 GZL O2 "Carbohydrate core" 9 TVG O3 GZL O3 "Carbohydrate core" 10 TVG O4 GZL O4 "Carbohydrate core" 11 TVG O5 GZL O5 "Carbohydrate core" 12 TVG O6 GZL O6 "Carbohydrate core" 13 TVG H1 GZL H1 "Carbohydrate core" 14 TVG H2 GZL H2 "Carbohydrate core" 15 TVG H3 GZL H3 "Carbohydrate core" 16 TVG H4 GZL H4 "Carbohydrate core" 17 TVG H5 GZL H5 "Carbohydrate core" 18 TVG H61 GZL H61 "Carbohydrate core" 19 TVG H62 GZL H62 "Carbohydrate core" 20 TVG HO2 GZL HO2 "Carbohydrate core" 21 TVG HO3 GZL HO3 "Carbohydrate core" 22 TVG HO5 GZL HO5 "Carbohydrate core" 23 TVG HO6 GZL HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support TVG "CARBOHYDRATE ISOMER" D PDB ? TVG "CARBOHYDRATE RING" pyranose PDB ? TVG "CARBOHYDRATE ANOMER" beta PDB ? TVG "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TVG "Create component" 2020-04-01 RCSB TVG "Initial release" 2020-07-29 RCSB ##