data_TWY # _chem_comp.id TWY _chem_comp.name 4-thio-beta-D-xylopyranose _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C5 H10 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-02 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 166.195 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TWY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3CUJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TWY S4 S4 S 0 1 N N N 17.958 62.869 25.991 -2.837 -0.263 0.171 S4 TWY 1 TWY C4 C4 C 0 1 N N R 19.712 62.899 25.471 -1.110 -0.348 -0.376 C4 TWY 2 TWY C5 C5 C 0 1 N N N 19.754 63.103 23.943 -0.472 -1.639 0.142 C5 TWY 3 TWY O5 O5 O 0 1 N N N 20.964 62.678 23.259 0.904 -1.676 -0.241 O5 TWY 4 TWY C1 C1 C 0 1 N N R 21.426 61.353 23.681 1.687 -0.604 0.288 C1 TWY 5 TWY O1 O1 O 0 1 N Y N 22.504 60.850 22.865 3.044 -0.752 -0.133 O1 TWY 6 TWY C2 C2 C 0 1 N N R 21.802 61.509 25.162 1.135 0.729 -0.225 C2 TWY 7 TWY O2 O2 O 0 1 N N N 22.567 60.395 25.637 1.880 1.806 0.348 O2 TWY 8 TWY C3 C3 C 0 1 N N R 20.493 61.637 25.941 -0.337 0.853 0.179 C3 TWY 9 TWY O3 O3 O 0 1 N N N 20.769 61.635 27.352 -0.880 2.060 -0.359 O3 TWY 10 TWY H4 H4 H 0 1 N N N 20.151 63.783 25.957 -1.072 -0.333 -1.466 H4 TWY 11 TWY H51 H51 H 0 1 N N N 19.620 64.177 23.747 -0.547 -1.671 1.229 H51 TWY 12 TWY H52 H52 H 0 1 N N N 18.912 62.543 23.509 -0.991 -2.498 -0.284 H52 TWY 13 TWY H1 H1 H 0 1 N N N 20.580 60.653 23.623 1.640 -0.622 1.376 H1 TWY 14 TWY HO1 HO1 H 0 1 N Y N 22.766 59.992 23.179 3.458 -1.577 0.156 HO1 TWY 15 TWY H2 H2 H 0 1 N N N 22.377 62.439 25.282 1.221 0.765 -1.311 H2 TWY 16 TWY HO2 HO2 H 0 1 N Y N 22.781 60.525 26.553 2.823 1.788 0.138 HO2 TWY 17 TWY H3 H3 H 0 1 N N N 19.874 60.760 25.700 -0.417 0.867 1.266 H3 TWY 18 TWY HO3 HO3 H 0 1 N Y N 19.955 61.715 27.835 -1.813 2.200 -0.147 HO3 TWY 19 TWY HS4 HS4 H 0 1 N Y N 18.060 62.694 27.275 -3.384 -1.360 -0.381 HS4 TWY 20 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TWY O1 C1 SING N N 1 TWY O5 C1 SING N N 2 TWY O5 C5 SING N N 3 TWY C1 C2 SING N N 4 TWY C5 C4 SING N N 5 TWY C2 O2 SING N N 6 TWY C2 C3 SING N N 7 TWY C4 C3 SING N N 8 TWY C4 S4 SING N N 9 TWY C3 O3 SING N N 10 TWY C4 H4 SING N N 11 TWY C5 H51 SING N N 12 TWY C5 H52 SING N N 13 TWY C1 H1 SING N N 14 TWY O1 HO1 SING N N 15 TWY C2 H2 SING N N 16 TWY O2 HO2 SING N N 17 TWY C3 H3 SING N N 18 TWY O3 HO3 SING N N 19 TWY S4 HS4 SING N N 20 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TWY SMILES ACDLabs 12.01 "SC1C(C(C(OC1)O)O)O" TWY InChI InChI 1.03 "InChI=1S/C5H10O4S/c6-3-2(10)1-9-5(8)4(3)7/h2-8,10H,1H2/t2-,3+,4-,5-/m1/s1" TWY InChIKey InChI 1.03 MFDZOCXKSSGEBR-KKQCNMDGSA-N TWY SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1OC[C@@H](S)[C@H](O)[C@H]1O" TWY SMILES CACTVS 3.385 "O[CH]1OC[CH](S)[CH](O)[CH]1O" TWY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)S" TWY SMILES "OpenEye OEToolkits" 2.0.7 "C1C(C(C(C(O1)O)O)O)S" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TWY "SYSTEMATIC NAME" ACDLabs 12.01 4-thio-beta-D-xylopyranose TWY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{R},5~{R})-5-sulfanyloxane-2,3,4-triol" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support TWY "CARBOHYDRATE ISOMER" D PDB ? TWY "CARBOHYDRATE RING" pyranose PDB ? TWY "CARBOHYDRATE ANOMER" beta PDB ? TWY "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TWY "Create component" 2020-04-02 RCSB TWY "Modify atom id" 2020-05-09 RCSB TWY "Modify component atom id" 2020-07-17 RCSB TWY "Initial release" 2020-07-29 RCSB ##