data_TXD # _chem_comp.id TXD _chem_comp.name "1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H31 N7 O14 P2" _chem_comp.mon_nstd_parent_comp_id A _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-02-15 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 667.457 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TXD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TXD O7N O7N O 0 1 N N N 59.519 51.083 137.146 -5.560 0.054 -0.356 O7N TXD 1 TXD C7N C7N C 0 1 N N N 58.883 50.245 137.769 -5.514 1.183 0.125 C7N TXD 2 TXD N7N N7N N 0 1 N N N 59.159 49.995 139.047 -6.235 2.253 -0.349 N7N TXD 3 TXD C3N C3N C 0 1 N N R 57.771 49.498 137.074 -4.632 1.517 1.292 C3N TXD 4 TXD C2N C2N C 0 1 N N N 56.756 48.862 137.781 -3.265 2.022 0.828 C2N TXD 5 TXD C4N C4N C 0 1 N N N 57.766 49.445 135.567 -4.576 0.288 2.149 C4N TXD 6 TXD C5N C5N C 0 1 N N N 56.653 48.715 134.998 -3.498 -0.507 2.200 C5N TXD 7 TXD C6N C6N C 0 1 N N N 55.709 48.117 135.808 -2.262 -0.279 1.388 C6N TXD 8 TXD N1N N1N N 0 1 N N N 55.769 48.201 137.143 -2.389 0.876 0.459 N1N TXD 9 TXD "C1'A" C1* C 0 0 N N R 54.718 47.544 137.920 -1.616 0.912 -0.791 "C1'A" TXD 10 TXD "O4'A" O4* O 0 0 N N N 54.602 46.161 137.584 -0.806 -0.244 -1.075 "O4'A" TXD 11 TXD "C2'A" C2* C 0 0 N N R 53.332 48.116 137.663 -0.664 2.101 -0.746 "C2'A" TXD 12 TXD "O2'A" O2* O 0 0 N N N 53.142 49.377 138.301 -1.276 3.314 -1.145 "O2'A" TXD 13 TXD "C3'A" C3* C 0 0 N N S 52.467 47.000 138.206 0.423 1.674 -1.712 "C3'A" TXD 14 TXD "O3'A" O3* O 0 0 N N N 52.244 47.173 139.608 -0.027 1.866 -3.054 "O3'A" TXD 15 TXD "C4'A" C4* C 0 0 N N R 53.284 45.732 137.953 0.524 0.180 -1.439 "C4'A" TXD 16 TXD "C5'A" C5* C 0 0 N N N 52.692 44.815 136.880 1.464 -0.159 -0.290 "C5'A" TXD 17 TXD "O5'A" O5* O 0 0 N N N 52.467 45.503 135.649 1.476 -1.565 -0.115 "O5'A" TXD 18 TXD PN PN P 0 1 N N R 51.928 44.720 134.340 2.405 -2.190 1.054 PN TXD 19 TXD O1N O1N O 0 1 N N N 51.690 45.746 133.264 2.370 -3.684 1.184 O1N TXD 20 TXD O2N O2N O 0 1 N N N 52.815 43.542 134.050 3.868 -1.563 0.765 O2N TXD 21 TXD O3 O3 O 0 1 N N N 50.506 44.123 134.796 1.920 -1.388 2.371 O3 TXD 22 TXD PA PA P 0 1 N N S 49.932 42.761 134.150 2.495 -1.383 3.882 PA TXD 23 TXD O2P O2P O 0 1 N N N 50.261 41.614 135.075 3.972 -0.744 3.714 O2P TXD 24 TXD O1P O1P O 0 1 N N N 50.330 42.672 132.698 2.474 -2.726 4.553 O1P TXD 25 TXD "O5'" "O5'" O 0 1 N N N 48.343 43.002 134.212 1.642 -0.235 4.638 "O5'" TXD 26 TXD "C5'" "C5'" C 0 1 N N N 47.781 44.190 133.661 1.586 1.076 4.100 "C5'" TXD 27 TXD "C4'" "C4'" C 0 1 N N R 46.816 44.834 134.643 0.725 1.943 5.001 "C4'" TXD 28 TXD "C3'" "C3'" C 0 1 N N S 47.373 45.069 136.046 0.605 3.380 4.523 "C3'" TXD 29 TXD "O3'" "O3'" O 0 1 N N N 47.429 46.476 136.299 -0.361 3.522 3.504 "O3'" TXD 30 TXD "C2'" "C2'" C 0 1 N N R 46.399 44.363 136.972 0.248 4.116 5.801 "C2'" TXD 31 TXD "O2'" "O2'" O 0 1 N N N 46.112 45.113 138.150 -1.154 4.057 6.057 "O2'" TXD 32 TXD "C1'" "C1'" C 0 1 N N R 45.160 44.219 136.104 0.990 3.316 6.872 "C1'" TXD 33 TXD "O4'" "O4'" O 0 1 N N N 45.674 43.997 134.799 1.320 2.029 6.307 "O4'" TXD 34 TXD N9A N9A N 0 1 Y N N 44.228 43.135 136.499 2.212 3.966 7.349 N9A TXD 35 TXD C4A C4A C 0 1 Y N N 42.906 43.289 136.579 2.336 4.786 8.436 C4A TXD 36 TXD N3A N3A N 0 1 Y N N 42.081 44.349 136.363 1.370 5.165 9.287 N3A TXD 37 TXD C2A C2A C 0 1 Y N N 40.747 44.239 136.521 1.874 5.981 10.238 C2A TXD 38 TXD N1A N1A N 0 1 Y N N 40.168 43.078 136.886 3.148 6.414 10.400 N1A TXD 39 TXD C6A C6A C 0 1 Y N N 40.910 41.970 137.125 4.070 5.990 9.503 C6A TXD 40 TXD N6A N6A N 0 1 N N N 40.339 40.798 137.499 5.409 6.404 9.616 N6A TXD 41 TXD C5A C5A C 0 1 Y N N 42.380 42.070 136.960 3.674 5.144 8.473 C5A TXD 42 TXD N7A N7A N 0 1 Y N N 43.399 41.203 137.096 4.361 4.562 7.437 N7A TXD 43 TXD C8A C8A C 0 1 Y N N 44.533 41.868 136.806 3.456 3.863 6.783 C8A TXD 44 TXD H7N1 1H7N H 0 0 N N N 58.542 49.288 139.393 -6.855 2.111 -1.140 H7N1 TXD 45 TXD H7N2 2H7N H 0 0 N N N 59.875 50.446 139.580 -6.172 3.180 0.060 H7N2 TXD 46 TXD H2N1 1H2N H 0 0 N N N 56.758 48.898 138.860 -3.347 2.682 -0.043 H2N1 TXD 47 TXD H2N2 2H2N H 0 0 N N N 56.780 48.838 136.682 -2.749 2.558 1.631 H2N2 TXD 48 TXD H6N1 1H6N H 0 0 N N N 54.899 47.566 135.352 -1.407 -0.074 2.038 H6N1 TXD 49 TXD H6N2 2H6N H 0 0 N N N 56.536 48.669 136.279 -2.047 -1.164 0.781 H6N2 TXD 50 TXD H3N H3N H 0 1 N N N 57.637 49.407 138.162 -5.133 2.321 1.842 H3N TXD 51 TXD H4N H4N H 0 1 N N N 58.529 49.913 134.963 -5.444 0.045 2.756 H4N TXD 52 TXD H5N H5N H 0 1 N N N 56.560 48.637 133.925 -3.514 -1.378 2.850 H5N TXD 53 TXD "H1'A" H1* H 0 0 N N N 55.024 47.704 138.964 -2.353 1.015 -1.594 "H1'A" TXD 54 TXD "H2'A" H2* H 0 0 N N N 53.110 48.363 136.614 -0.236 2.239 0.255 "H2'A" TXD 55 TXD HO2A HO2* H 0 0 N N N 53.100 49.253 139.242 -1.139 3.402 -2.104 HO2A TXD 56 TXD "H3'A" H3* H 0 0 N N N 51.476 46.969 137.730 1.361 2.222 -1.593 "H3'A" TXD 57 TXD HO3A HO3* H 0 0 N N N 53.079 47.211 140.060 -0.387 1.015 -3.346 HO3A TXD 58 TXD "H4'A" H4* H 0 0 N N N 53.286 45.121 138.868 0.821 -0.382 -2.330 "H4'A" TXD 59 TXD "H5'1" 1H5* H 0 0 N N N 51.730 44.424 137.244 1.117 0.314 0.630 "H5'1" TXD 60 TXD "H5'2" 2H5* H 0 0 N N N 53.412 44.005 136.690 2.475 0.182 -0.518 "H5'2" TXD 61 TXD HO2N HO2N H 0 0 N N N 53.002 43.507 133.119 4.420 -1.953 0.054 HO2N TXD 62 TXD HO2P HO2P H 0 0 N N N 50.330 40.811 134.572 4.584 -0.759 4.480 HO2P TXD 63 TXD "H5'A" "1H5'" H 0 0 N N N 48.591 44.899 133.436 2.602 1.475 4.040 "H5'A" TXD 64 TXD "H5'B" "2H5'" H 0 0 N N N 47.232 43.930 132.744 1.159 1.026 3.094 "H5'B" TXD 65 TXD "H4'" "H4'" H 0 1 N N N 46.589 45.817 134.205 -0.261 1.474 5.102 "H4'" TXD 66 TXD "H3'" "H3'" H 0 1 N N N 48.394 44.684 136.185 1.572 3.738 4.151 "H3'" TXD 67 TXD "HO3'" "HO3'" H 0 0 N N N 47.441 46.629 137.236 -0.102 4.300 2.987 "HO3'" TXD 68 TXD "H2'" "H2'" H 0 1 N N N 46.798 43.410 137.349 0.521 5.175 5.767 "H2'" TXD 69 TXD "HO2'" "HO2'" H 0 0 N N N 46.048 44.524 138.893 -1.347 3.166 6.400 "HO2'" TXD 70 TXD "H1'" "H1'" H 0 1 N N N 44.536 45.120 136.197 0.384 3.152 7.769 "H1'" TXD 71 TXD H2A H2A H 0 1 N N N 40.125 45.105 136.350 1.162 6.339 10.975 H2A TXD 72 TXD H6A1 1H6A H 0 0 N N N 40.198 40.223 136.693 5.729 7.189 9.081 H6A1 TXD 73 TXD H6A2 2H6A H 0 0 N N N 40.939 40.326 138.144 6.050 5.855 10.157 H6A2 TXD 74 TXD H8A H8A H 0 1 N N N 45.528 41.448 136.819 3.640 3.266 5.899 H8A TXD 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TXD O7N C7N DOUB N N 1 TXD C7N C3N SING N N 2 TXD C7N N7N SING N N 3 TXD N7N H7N1 SING N N 4 TXD N7N H7N2 SING N N 5 TXD C3N C4N SING N N 6 TXD C3N C2N SING N N 7 TXD C3N H3N SING N N 8 TXD C2N N1N SING N N 9 TXD C2N H2N1 SING N N 10 TXD C2N H2N2 SING N N 11 TXD C4N C5N DOUB N N 12 TXD C4N H4N SING N N 13 TXD C5N C6N SING N N 14 TXD C5N H5N SING N N 15 TXD C6N N1N SING N N 16 TXD C6N H6N1 SING N N 17 TXD C6N H6N2 SING N N 18 TXD N1N "C1'A" SING N N 19 TXD "C1'A" "O4'A" SING N N 20 TXD "C1'A" "C2'A" SING N N 21 TXD "C1'A" "H1'A" SING N N 22 TXD "O4'A" "C4'A" SING N N 23 TXD "C2'A" "C3'A" SING N N 24 TXD "C2'A" "O2'A" SING N N 25 TXD "C2'A" "H2'A" SING N N 26 TXD "O2'A" HO2A SING N N 27 TXD "C3'A" "C4'A" SING N N 28 TXD "C3'A" "O3'A" SING N N 29 TXD "C3'A" "H3'A" SING N N 30 TXD "O3'A" HO3A SING N N 31 TXD "C4'A" "C5'A" SING N N 32 TXD "C4'A" "H4'A" SING N N 33 TXD "C5'A" "O5'A" SING N N 34 TXD "C5'A" "H5'1" SING N N 35 TXD "C5'A" "H5'2" SING N N 36 TXD "O5'A" PN SING N N 37 TXD PN O1N DOUB N N 38 TXD PN O2N SING N N 39 TXD PN O3 SING N N 40 TXD O2N HO2N SING N N 41 TXD O3 PA SING N N 42 TXD PA O1P DOUB N N 43 TXD PA "O5'" SING N N 44 TXD PA O2P SING N N 45 TXD O2P HO2P SING N N 46 TXD "O5'" "C5'" SING N N 47 TXD "C5'" "C4'" SING N N 48 TXD "C5'" "H5'A" SING N N 49 TXD "C5'" "H5'B" SING N N 50 TXD "C4'" "O4'" SING N N 51 TXD "C4'" "C3'" SING N N 52 TXD "C4'" "H4'" SING N N 53 TXD "C3'" "O3'" SING N N 54 TXD "C3'" "C2'" SING N N 55 TXD "C3'" "H3'" SING N N 56 TXD "O3'" "HO3'" SING N N 57 TXD "C2'" "C1'" SING N N 58 TXD "C2'" "O2'" SING N N 59 TXD "C2'" "H2'" SING N N 60 TXD "O2'" "HO2'" SING N N 61 TXD "C1'" "O4'" SING N N 62 TXD "C1'" N9A SING N N 63 TXD "C1'" "H1'" SING N N 64 TXD N9A C4A SING Y N 65 TXD N9A C8A SING Y N 66 TXD C4A N3A SING Y N 67 TXD C4A C5A DOUB Y N 68 TXD N3A C2A DOUB Y N 69 TXD C2A N1A SING Y N 70 TXD C2A H2A SING N N 71 TXD N1A C6A DOUB Y N 72 TXD C6A C5A SING Y N 73 TXD C6A N6A SING N N 74 TXD N6A H6A1 SING N N 75 TXD N6A H6A2 SING N N 76 TXD C5A N7A SING Y N 77 TXD N7A C8A DOUB Y N 78 TXD C8A H8A SING N N 79 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TXD SMILES_CANONICAL CACTVS 3.341 "NC(=O)[C@H]1CN(CC=C1)[C@@H]2O[C@H](CO[P@](O)(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O" TXD SMILES CACTVS 3.341 "NC(=O)[CH]1CN(CC=C1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O" TXD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)N5CC=CC(C5)C(=O)N)O)O)O)O)N" TXD SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)N5CC=CC(C5)C(=O)N)O)O)O)O)N" TXD InChI InChI 1.03 ;InChI=1S/C21H31N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-2,7-11,13-16,20-21,29-32H,3-6H2,(H2,23,33)(H,34,35)(H,36,37)(H2,22,24,25)/t9?,10-,11-,13-,14-,15-,16-,20-,21-/m1/s1 ; TXD InChIKey InChI 1.03 GFDCQHGWOHYWLP-BFAIWXBASA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TXD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(3-aminocarbonyl-3,6-dihydro-2H-pyridin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TXD "Create component" 2007-02-15 RCSB TXD "Modify descriptor" 2011-06-04 RCSB #