data_TXG # _chem_comp.id TXG _chem_comp.name "(3S,6S,9S,15aR)-6,9-dibenzyl-3-{6,6-dihydroxy-6-[(2S)-oxiran-2-yl]hexyl}octahydro-2H-pyrido[1,2-a][1,4,7,10]tetraazacyclododecine-1,4,7,10(3H,12H)-tetrone" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H44 N4 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-04-17 _chem_comp.pdbx_modified_date 2017-09-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 620.736 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TXG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5VI6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TXG O01 O1 O 0 1 N N N 4.407 -7.320 -37.964 -3.097 -2.331 -2.251 O01 TXG 1 TXG C02 C1 C 0 1 N N N 5.004 -7.223 -36.906 -3.189 -2.223 -1.046 C02 TXG 2 TXG C03 C2 C 0 1 N N S 5.774 -5.930 -36.677 -4.100 -1.168 -0.489 C03 TXG 3 TXG C04 C3 C 0 1 N N N 7.257 -6.118 -36.979 -5.331 -1.015 -1.385 C04 TXG 4 TXG C05 C4 C 0 1 Y N N 7.953 -4.873 -37.391 -6.294 -0.044 -0.752 C05 TXG 5 TXG C06 C5 C 0 1 Y N N 8.634 -4.099 -36.453 -6.204 1.306 -1.040 C06 TXG 6 TXG C07 C6 C 0 1 Y N N 9.246 -2.913 -36.808 -7.087 2.197 -0.460 C07 TXG 7 TXG C08 C7 C 0 1 Y N N 9.222 -2.481 -38.113 -8.061 1.739 0.408 C08 TXG 8 TXG C09 C8 C 0 1 Y N N 8.549 -3.236 -39.051 -8.151 0.390 0.696 C09 TXG 9 TXG C10 C9 C 0 1 Y N N 7.926 -4.423 -38.696 -7.272 -0.502 0.111 C10 TXG 10 TXG N11 N1 N 0 1 N N N 5.618 -5.326 -35.371 -3.321 0.109 -0.469 N11 TXG 11 TXG C12 C10 C 0 1 N N N 4.511 -4.611 -34.995 -3.054 0.573 0.798 C12 TXG 12 TXG C13 C11 C 0 1 N N S 4.472 -3.917 -33.607 -2.147 1.772 0.947 C13 TXG 13 TXG C14 C12 C 0 1 N N N 5.412 -2.709 -33.651 -2.129 2.573 -0.357 C14 TXG 14 TXG C15 C13 C 0 1 Y N N 5.080 -1.712 -34.734 -1.269 3.798 -0.181 C15 TXG 15 TXG C16 C14 C 0 1 Y N N 5.818 -1.642 -35.915 -1.831 4.978 0.272 C16 TXG 16 TXG C17 C15 C 0 1 Y N N 5.473 -0.760 -36.934 -1.041 6.100 0.438 C17 TXG 17 TXG C18 C16 C 0 1 Y N N 4.359 0.053 -36.810 0.310 6.043 0.152 C18 TXG 18 TXG C19 C17 C 0 1 Y N N 3.589 -0.044 -35.673 0.872 4.864 -0.301 C19 TXG 19 TXG C20 C18 C 0 1 Y N N 3.930 -0.927 -34.660 0.082 3.741 -0.468 C20 TXG 20 TXG N21 N2 N 0 1 N N N 4.844 -4.949 -32.703 -0.783 1.270 1.248 N21 TXG 21 TXG C22 C19 C 0 1 N N N 3.936 -5.615 -31.926 -0.243 0.491 0.273 C22 TXG 22 TXG C23 C20 C 0 1 N N S 4.421 -6.918 -31.340 1.010 -0.307 0.516 C23 TXG 23 TXG C24 C21 C 0 1 N N N 5.287 -6.764 -30.125 2.221 0.424 -0.067 C24 TXG 24 TXG C25 C22 C 0 1 N N N 4.572 -6.175 -28.931 3.499 -0.335 0.296 C25 TXG 25 TXG C26 C23 C 0 1 N N N 5.484 -6.069 -27.743 4.710 0.396 -0.287 C26 TXG 26 TXG C27 C24 C 0 1 N N N 4.774 -5.637 -26.472 5.988 -0.363 0.075 C27 TXG 27 TXG C28 C25 C 0 1 N N N 5.742 -5.327 -25.346 7.198 0.368 -0.508 C28 TXG 28 TXG C29 C26 C 0 1 N N N 5.124 -5.352 -23.951 8.476 -0.391 -0.145 C29 TXG 29 TXG O30 O2 O 0 1 N N N 4.075 -4.396 -23.887 8.601 -0.461 1.277 O30 TXG 30 TXG O31 O3 O 0 1 N N N 4.531 -6.584 -23.671 8.414 -1.713 -0.683 O31 TXG 31 TXG C32 C27 C 0 1 N N S 6.110 -5.042 -22.811 9.687 0.340 -0.728 C32 TXG 32 TXG O33 O4 O 0 1 N N N 7.362 -5.767 -22.885 10.542 1.041 0.178 O33 TXG 33 TXG C34 C28 C 0 1 N N N 7.403 -4.338 -23.019 11.079 -0.174 -0.354 C34 TXG 34 TXG N35 N3 N 0 1 N N N 5.179 -7.585 -32.420 0.815 -1.613 -0.181 N35 TXG 35 TXG C36 C29 C 0 1 N N N 4.690 -7.774 -33.688 -0.255 -2.316 0.298 C36 TXG 36 TXG C37 C30 C 0 1 N N R 5.666 -8.314 -34.746 -1.049 -3.219 -0.598 C37 TXG 37 TXG C38 C31 C 0 1 N N N 6.232 -9.685 -34.387 -0.645 -4.670 -0.443 C38 TXG 38 TXG C39 C32 C 0 1 N N N 5.233 -10.804 -34.566 -1.082 -5.225 0.914 C39 TXG 39 TXG C40 C33 C 0 1 N N N 4.729 -10.839 -35.980 -2.608 -5.153 1.002 C40 TXG 40 TXG C41 C34 C 0 1 N N N 4.166 -9.491 -36.405 -3.043 -3.690 0.901 C41 TXG 41 TXG N42 N4 N 0 1 N N N 5.006 -8.336 -36.040 -2.476 -3.056 -0.273 N42 TXG 42 TXG O43 O5 O 0 1 N N N 3.515 -7.523 -33.932 -0.567 -2.208 1.465 O43 TXG 43 TXG O44 O6 O 0 1 N N N 2.798 -5.200 -31.724 -0.781 0.439 -0.813 O44 TXG 44 TXG O45 O7 O 0 1 N N N 3.568 -4.528 -35.774 -3.534 0.032 1.772 O45 TXG 45 TXG H031 H1 H 0 0 N N N 5.396 -5.209 -37.417 -4.405 -1.435 0.522 H031 TXG 46 TXG H041 H2 H 0 0 N N N 7.354 -6.853 -37.791 -5.026 -0.640 -2.362 H041 TXG 47 TXG H042 H3 H 0 0 N N N 7.748 -6.505 -36.074 -5.817 -1.984 -1.503 H042 TXG 48 TXG H061 H4 H 0 0 N N N 8.684 -4.434 -35.427 -5.443 1.663 -1.718 H061 TXG 49 TXG H071 H5 H 0 0 N N N 9.747 -2.321 -36.056 -7.016 3.251 -0.685 H071 TXG 50 TXG H081 H6 H 0 0 N N N 9.721 -1.567 -38.399 -8.750 2.435 0.862 H081 TXG 51 TXG H091 H7 H 0 0 N N N 8.507 -2.898 -40.076 -8.915 0.032 1.370 H091 TXG 52 TXG H101 H8 H 0 0 N N N 7.413 -5.003 -39.450 -7.342 -1.556 0.336 H101 TXG 53 TXG H111 H9 H 0 0 N N N 6.358 -5.436 -34.707 -3.032 0.567 -1.273 H111 TXG 54 TXG H131 H10 H 0 0 N N N 3.447 -3.572 -33.407 -2.499 2.402 1.764 H131 TXG 55 TXG H142 H11 H 0 0 N N N 6.436 -3.074 -33.819 -1.722 1.956 -1.157 H142 TXG 56 TXG H141 H12 H 0 0 N N N 5.360 -2.195 -32.680 -3.145 2.876 -0.611 H141 TXG 57 TXG H161 H13 H 0 0 N N N 6.676 -2.286 -36.041 -2.886 5.022 0.496 H161 TXG 58 TXG H171 H14 H 0 0 N N N 6.078 -0.709 -37.827 -1.480 7.021 0.792 H171 TXG 59 TXG H181 H15 H 0 0 N N N 4.099 0.751 -37.592 0.927 6.920 0.281 H181 TXG 60 TXG H191 H16 H 0 0 N N N 2.710 0.574 -35.569 1.927 4.819 -0.525 H191 TXG 61 TXG H201 H17 H 0 0 N N N 3.290 -1.009 -33.794 0.521 2.819 -0.818 H201 TXG 62 TXG H211 H18 H 0 0 N N N 5.810 -5.199 -32.632 -0.315 1.480 2.072 H211 TXG 63 TXG H231 H19 H 0 0 N N N 3.548 -7.534 -31.078 1.150 -0.468 1.585 H231 TXG 64 TXG H242 H20 H 0 0 N N N 5.669 -7.757 -29.844 2.126 0.477 -1.152 H242 TXG 65 TXG H241 H21 H 0 0 N N N 6.130 -6.106 -30.382 2.269 1.433 0.343 H241 TXG 66 TXG H252 H22 H 0 0 N N N 4.207 -5.171 -29.192 3.594 -0.388 1.380 H252 TXG 67 TXG H251 H23 H 0 0 N N N 3.719 -6.819 -28.671 3.451 -1.344 -0.115 H251 TXG 68 TXG H262 H24 H 0 0 N N N 5.944 -7.053 -27.568 4.614 0.449 -1.372 H262 TXG 69 TXG H261 H25 H 0 0 N N N 6.269 -5.333 -27.971 4.758 1.405 0.123 H261 TXG 70 TXG H271 H26 H 0 0 N N N 4.182 -4.735 -26.687 6.083 -0.416 1.160 H271 TXG 71 TXG H272 H27 H 0 0 N N N 4.104 -6.447 -26.149 5.940 -1.372 -0.335 H272 TXG 72 TXG H281 H28 H 0 0 N N N 6.552 -6.071 -25.376 7.103 0.421 -1.592 H281 TXG 73 TXG H282 H29 H 0 0 N N N 6.159 -4.324 -25.519 7.246 1.377 -0.097 H282 TXG 74 TXG H301 H30 H 0 0 N N N 3.687 -4.408 -23.020 8.649 0.402 1.711 H301 TXG 75 TXG H311 H31 H 0 0 N N N 4.157 -6.565 -22.798 8.328 -1.742 -1.646 H311 TXG 76 TXG H321 H32 H 0 0 N N N 5.655 -4.936 -21.815 9.551 0.759 -1.725 H321 TXG 77 TXG H341 H33 H 0 0 N N N 7.831 -3.721 -22.215 11.140 -1.036 0.310 H341 TXG 78 TXG H342 H34 H 0 0 N N N 7.632 -3.882 -23.993 11.867 -0.096 -1.102 H342 TXG 79 TXG H351 H35 H 0 0 N N N 6.100 -7.917 -32.215 1.387 -1.929 -0.898 H351 TXG 80 TXG H371 H36 H 0 0 N N N 6.511 -7.612 -34.800 -0.902 -2.905 -1.639 H371 TXG 81 TXG H382 H37 H 0 0 N N N 7.101 -9.885 -35.032 -1.110 -5.256 -1.236 H382 TXG 82 TXG H381 H38 H 0 0 N N N 6.553 -9.667 -33.335 0.439 -4.750 -0.529 H381 TXG 83 TXG H392 H39 H 0 0 N N N 4.385 -10.645 -33.884 -0.759 -6.261 1.007 H392 TXG 84 TXG H391 H40 H 0 0 N N N 5.718 -11.763 -34.331 -0.639 -4.630 1.712 H391 TXG 85 TXG H401 H41 H 0 0 N N N 3.937 -11.598 -36.058 -3.048 -5.722 0.183 H401 TXG 86 TXG H402 H42 H 0 0 N N N 5.560 -11.106 -36.649 -2.938 -5.569 1.954 H402 TXG 87 TXG H412 H43 H 0 0 N N N 3.182 -9.364 -35.930 -4.130 -3.638 0.846 H412 TXG 88 TXG H411 H44 H 0 0 N N N 4.047 -9.498 -37.499 -2.706 -3.158 1.792 H411 TXG 89 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TXG C09 C10 DOUB Y N 1 TXG C09 C08 SING Y N 2 TXG C10 C05 SING Y N 3 TXG C08 C07 DOUB Y N 4 TXG O01 C02 DOUB N N 5 TXG C05 C04 SING N N 6 TXG C05 C06 DOUB Y N 7 TXG C04 C03 SING N N 8 TXG C17 C18 DOUB Y N 9 TXG C17 C16 SING Y N 10 TXG C02 C03 SING N N 11 TXG C02 N42 SING N N 12 TXG C18 C19 SING Y N 13 TXG C07 C06 SING Y N 14 TXG C03 N11 SING N N 15 TXG C41 N42 SING N N 16 TXG C41 C40 SING N N 17 TXG N42 C37 SING N N 18 TXG C40 C39 SING N N 19 TXG C16 C15 DOUB Y N 20 TXG O45 C12 DOUB N N 21 TXG C19 C20 DOUB Y N 22 TXG N11 C12 SING N N 23 TXG C12 C13 SING N N 24 TXG C37 C38 SING N N 25 TXG C37 C36 SING N N 26 TXG C15 C20 SING Y N 27 TXG C15 C14 SING N N 28 TXG C39 C38 SING N N 29 TXG O43 C36 DOUB N N 30 TXG C36 N35 SING N N 31 TXG C14 C13 SING N N 32 TXG C13 N21 SING N N 33 TXG N21 C22 SING N N 34 TXG N35 C23 SING N N 35 TXG C22 O44 DOUB N N 36 TXG C22 C23 SING N N 37 TXG C23 C24 SING N N 38 TXG C24 C25 SING N N 39 TXG C25 C26 SING N N 40 TXG C26 C27 SING N N 41 TXG C27 C28 SING N N 42 TXG C28 C29 SING N N 43 TXG C29 O30 SING N N 44 TXG C29 O31 SING N N 45 TXG C29 C32 SING N N 46 TXG C34 O33 SING N N 47 TXG C34 C32 SING N N 48 TXG O33 C32 SING N N 49 TXG C03 H031 SING N N 50 TXG C04 H041 SING N N 51 TXG C04 H042 SING N N 52 TXG C06 H061 SING N N 53 TXG C07 H071 SING N N 54 TXG C08 H081 SING N N 55 TXG C09 H091 SING N N 56 TXG C10 H101 SING N N 57 TXG N11 H111 SING N N 58 TXG C13 H131 SING N N 59 TXG C14 H142 SING N N 60 TXG C14 H141 SING N N 61 TXG C16 H161 SING N N 62 TXG C17 H171 SING N N 63 TXG C18 H181 SING N N 64 TXG C19 H191 SING N N 65 TXG C20 H201 SING N N 66 TXG N21 H211 SING N N 67 TXG C23 H231 SING N N 68 TXG C24 H242 SING N N 69 TXG C24 H241 SING N N 70 TXG C25 H252 SING N N 71 TXG C25 H251 SING N N 72 TXG C26 H262 SING N N 73 TXG C26 H261 SING N N 74 TXG C27 H271 SING N N 75 TXG C27 H272 SING N N 76 TXG C28 H281 SING N N 77 TXG C28 H282 SING N N 78 TXG O30 H301 SING N N 79 TXG O31 H311 SING N N 80 TXG C32 H321 SING N N 81 TXG C34 H341 SING N N 82 TXG C34 H342 SING N N 83 TXG N35 H351 SING N N 84 TXG C37 H371 SING N N 85 TXG C38 H382 SING N N 86 TXG C38 H381 SING N N 87 TXG C39 H392 SING N N 88 TXG C39 H391 SING N N 89 TXG C40 H401 SING N N 90 TXG C40 H402 SING N N 91 TXG C41 H412 SING N N 92 TXG C41 H411 SING N N 93 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TXG SMILES ACDLabs 12.01 "O=C2C(NC(C(NC(=O)C(CCCCCC(O)(O)C1OC1)NC(C3CCCCN23)=O)Cc4ccccc4)=O)Cc5ccccc5" TXG InChI InChI 1.03 ;InChI=1S/C34H44N4O7/c39-30-25(16-8-3-10-18-34(43,44)29-22-45-29)35-32(41)28-17-9-11-19-38(28)33(42)27(21-24-14-6-2-7-15-24)37-31(40)26(36-30)20-23-12-4-1-5-13-23/h1-2,4-7,12-15,25-29,43-44H,3,8-11,16-22H2,(H,35,41)(H,36,39)(H,37,40)/t25-,26-,27-,28+,29-/m0/s1 ; TXG InChIKey InChI 1.03 IQEGEIYGULTIMD-CNXZJCAJSA-N TXG SMILES_CANONICAL CACTVS 3.385 "OC(O)(CCCCC[C@@H]1NC(=O)[C@H]2CCCCN2C(=O)[C@H](Cc3ccccc3)NC(=O)[C@H](Cc4ccccc4)NC1=O)[C@@H]5CO5" TXG SMILES CACTVS 3.385 "OC(O)(CCCCC[CH]1NC(=O)[CH]2CCCCN2C(=O)[CH](Cc3ccccc3)NC(=O)[CH](Cc4ccccc4)NC1=O)[CH]5CO5" TXG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)C[C@H]2C(=O)N[C@H](C(=O)N3CCCC[C@@H]3C(=O)N[C@H](C(=O)N2)CCCCCC([C@@H]4CO4)(O)O)Cc5ccccc5" TXG SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)CC2C(=O)NC(C(=O)N3CCCCC3C(=O)NC(C(=O)N2)CCCCCC(C4CO4)(O)O)Cc5ccccc5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TXG "SYSTEMATIC NAME" ACDLabs 12.01 "(3S,6S,9S,15aR)-6,9-dibenzyl-3-{6,6-dihydroxy-6-[(2S)-oxiran-2-yl]hexyl}octahydro-2H-pyrido[1,2-a][1,4,7,10]tetraazacyclododecine-1,4,7,10(3H,12H)-tetrone" TXG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(3~{S},6~{S},9~{S},12~{R})-9-[6,6-bis(oxidanyl)-6-[(2~{S})-oxiran-2-yl]hexyl]-3,6-bis(phenylmethyl)-1,4,7,10-tetrazabicyclo[10.4.0]hexadecane-2,5,8,11-tetrone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TXG "Create component" 2017-04-17 RCSB TXG "Initial release" 2017-09-06 RCSB #