data_TY6 # _chem_comp.id TY6 _chem_comp.name "(2~{S},3~{R},4~{S},5~{S},6~{S})-6-[(2-azanylhydrazinyl)methyl]oxane-2,3,4,5-tetrol" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H15 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-11 _chem_comp.pdbx_modified_date 2023-09-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 209.200 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TY6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8JA9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TY6 C02 C1 C 0 1 N N S 7.356 -10.792 -16.926 -0.638 -1.450 0.134 C02 TY6 1 TY6 C03 C2 C 0 1 N N S 8.444 -11.374 -17.815 0.348 -0.372 -0.324 C03 TY6 2 TY6 C04 C3 C 0 1 N N N 9.161 -10.482 -18.650 1.710 -0.617 0.329 C04 TY6 3 TY6 C09 C4 C 0 1 N N S 7.158 -13.268 -18.375 -1.403 1.256 -0.515 C09 TY6 4 TY6 C22 C5 C 0 1 N N R 6.228 -12.904 -17.243 -2.460 0.244 -0.065 C22 TY6 5 TY6 C24 C6 C 0 1 N N S 6.064 -11.457 -17.104 -2.014 -1.163 -0.476 C24 TY6 6 TY6 N05 N1 N 0 1 N N N 10.498 -10.403 -18.233 2.656 0.417 -0.110 N05 TY6 7 TY6 N06 N2 N 0 1 N N N 10.775 -10.630 -16.879 3.964 0.216 0.491 N06 TY6 8 TY6 N07 N3 N 0 1 N N N 11.370 -11.867 -16.790 4.999 0.134 -0.527 N07 TY6 9 TY6 O01 O1 O 0 1 N N N 7.308 -9.430 -16.980 -0.734 -1.436 1.559 O01 TY6 10 TY6 O08 O2 O 0 1 N N N 8.486 -12.738 -18.191 -0.141 0.914 0.062 O08 TY6 11 TY6 O23 O3 O 0 1 N N N 5.020 -13.590 -17.345 -2.604 0.303 1.355 O23 TY6 12 TY6 O25 O4 O 0 1 N N N 5.211 -11.071 -16.057 -1.932 -1.243 -1.900 O25 TY6 13 TY6 O1 O5 O 0 1 N Y N 6.702 -12.857 -19.592 -1.784 2.565 -0.087 O1 TY6 14 TY6 H1 H1 H 0 1 N N N 7.670 -11.048 -15.903 -0.289 -2.428 -0.198 H1 TY6 15 TY6 H2 H2 H 0 1 N N N 9.208 -11.442 -17.027 0.452 -0.411 -1.408 H2 TY6 16 TY6 H3 H3 H 0 1 N N N 8.703 -9.484 -18.595 1.606 -0.578 1.413 H3 TY6 17 TY6 H4 H4 H 0 1 N N N 9.124 -10.845 -19.688 2.082 -1.599 0.035 H4 TY6 18 TY6 H5 H5 H 0 1 N N N 7.236 -14.365 -18.381 -1.322 1.238 -1.602 H5 TY6 19 TY6 H6 H6 H 0 1 N N N 6.723 -13.250 -16.324 -3.413 0.477 -0.540 H6 TY6 20 TY6 H7 H7 H 0 1 N N N 5.634 -11.086 -18.046 -2.735 -1.895 -0.110 H7 TY6 21 TY6 H8 H8 H 0 1 N N N 11.015 -11.077 -18.760 2.721 0.444 -1.117 H8 TY6 22 TY6 H9 H9 H 0 1 N N N 11.395 -9.926 -16.533 4.171 0.943 1.160 H9 TY6 23 TY6 H10 H10 H 0 1 N N N 11.584 -12.066 -15.834 5.907 -0.006 -0.109 H10 TY6 24 TY6 H11 H11 H 0 1 N N N 10.746 -12.563 -17.144 4.793 -0.593 -1.195 H11 TY6 25 TY6 H12 H12 H 0 1 N N N 6.616 -9.114 -16.411 -1.345 -2.093 1.919 H12 TY6 26 TY6 H13 H13 H 0 1 N N N 4.454 -13.344 -16.623 -2.880 1.169 1.686 H13 TY6 27 TY6 H14 H14 H 0 1 N N N 5.153 -10.123 -16.028 -2.768 -1.065 -2.353 H14 TY6 28 TY6 H15 H15 H 0 1 N N N 5.826 -13.196 -19.734 -1.158 3.258 -0.337 H15 TY6 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TY6 O1 C09 SING N N 1 TY6 C04 N05 SING N N 2 TY6 C04 C03 SING N N 3 TY6 C09 O08 SING N N 4 TY6 C09 C22 SING N N 5 TY6 N05 N06 SING N N 6 TY6 O08 C03 SING N N 7 TY6 C03 C02 SING N N 8 TY6 O23 C22 SING N N 9 TY6 C22 C24 SING N N 10 TY6 C24 C02 SING N N 11 TY6 C24 O25 SING N N 12 TY6 O01 C02 SING N N 13 TY6 N06 N07 SING N N 14 TY6 C02 H1 SING N N 15 TY6 C03 H2 SING N N 16 TY6 C04 H3 SING N N 17 TY6 C04 H4 SING N N 18 TY6 C09 H5 SING N N 19 TY6 C22 H6 SING N N 20 TY6 C24 H7 SING N N 21 TY6 N05 H8 SING N N 22 TY6 N06 H9 SING N N 23 TY6 N07 H10 SING N N 24 TY6 N07 H11 SING N N 25 TY6 O01 H12 SING N N 26 TY6 O23 H13 SING N N 27 TY6 O25 H14 SING N N 28 TY6 O1 H15 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TY6 InChI InChI 1.06 "InChI=1S/C6H15N3O5/c7-9-8-1-2-3(10)4(11)5(12)6(13)14-2/h2-6,8-13H,1,7H2/t2-,3+,4-,5+,6-/m0/s1" TY6 InChIKey InChI 1.06 HEZRRHKWEZVWNK-ZSNZIGRDSA-N TY6 SMILES_CANONICAL CACTVS 3.385 "NNNC[C@@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O" TY6 SMILES CACTVS 3.385 "NNNC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O" TY6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)NNN" TY6 SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)O)O)O)O)NNN" # _pdbx_chem_comp_identifier.comp_id TY6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R},4~{S},5~{S},6~{S})-6-[(2-azanylhydrazinyl)methyl]oxane-2,3,4,5-tetrol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TY6 "Create component" 2023-05-11 PDBJ TY6 "Modify coordinates" 2023-05-11 PDBJ TY6 "Modify formula" 2023-05-11 PDBJ TY6 "Modify name" 2023-05-11 PDBJ TY6 "Modify leaving atom flag" 2023-09-21 PDBJ TY6 "Modify linking type" 2023-09-28 PDBJ TY6 "Initial release" 2023-10-04 RCSB #