data_TY9 # _chem_comp.id TY9 _chem_comp.name "3,4-bis(hydroperoxy)-5-hydroxy-L-phenylalanine" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C9 H11 N O7" _chem_comp.mon_nstd_parent_comp_id TYR _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-07-19 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 245.186 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TY9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NBB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TY9 C C C 0 1 N N N N N N -6.642 97.880 66.170 4.132 -0.280 0.220 C TY9 1 TY9 N N N 0 1 N N N N N N -4.780 96.256 66.628 2.444 1.163 1.207 N TY9 2 TY9 O O O 0 1 N N N N N N -7.486 96.984 66.125 4.900 0.645 0.336 O TY9 3 TY9 C1 C1 C 0 1 Y N N N N N -3.298 97.737 64.325 0.474 0.167 -0.731 C1 TY9 4 TY9 C2 C2 C 0 1 Y N N N N N -2.722 96.539 63.672 -0.293 -0.984 -0.709 C2 TY9 5 TY9 C3 C3 C 0 1 Y N N N N N -1.267 96.511 63.296 -1.664 -0.902 -0.519 C3 TY9 6 TY9 O3 O3 O 0 1 N N N N N N -0.715 95.419 62.705 -2.417 -2.034 -0.497 O3 TY9 7 TY9 C4 C4 C 0 1 Y N N N N N -0.435 97.639 63.558 -2.267 0.338 -0.350 C4 TY9 8 TY9 O4 O4 O 0 1 N N N N N N 0.789 97.619 63.251 -3.613 0.423 -0.162 O4 TY9 9 TY9 C5 C5 C 0 1 Y N N N N N -1.028 98.864 64.215 -1.493 1.492 -0.372 C5 TY9 10 TY9 O5 O5 O 0 1 N N N N N N -0.327 99.871 64.455 -2.079 2.708 -0.206 O5 TY9 11 TY9 C6 C6 C 0 1 Y N N N N N -2.487 98.864 64.587 -0.123 1.402 -0.563 C6 TY9 12 TY9 CA CA C 0 1 N N S N N N -5.152 97.595 66.158 2.655 -0.063 0.426 CA TY9 13 TY9 CB CB C 0 1 N N N N N N -4.640 97.865 64.738 1.964 0.073 -0.932 CB TY9 14 TY9 O3A O3A O 0 1 N N N N N N -0.786 94.198 63.164 -2.569 -2.625 0.839 O3A TY9 15 TY9 O4A O4A O 0 1 N N N N N N 1.774 97.651 64.130 -4.024 0.366 1.247 O4A TY9 16 TY9 OXT OXT O 0 1 N Y N N N N -7.012 99.261 66.170 4.593 -1.500 -0.099 OXT TY9 17 TY9 HN HN H 0 1 N N N N N N -3.786 96.152 66.588 2.836 1.074 2.133 HN TY9 18 TY9 HNA HNA H 0 1 N N N N N N -5.090 96.136 67.571 2.826 1.966 0.729 HNA TY9 19 TY9 H2 H2 H 0 1 N N N N N N -3.349 95.684 63.466 0.177 -1.947 -0.840 H2 TY9 20 TY9 H61 H61 H 0 1 N N N N N N -0.862 100.539 64.867 -2.131 2.998 0.715 H61 TY9 21 TY9 H6 H6 H 0 1 N N N N N N -2.918 99.734 65.059 0.480 2.298 -0.577 H6 TY9 22 TY9 HA HA H 0 1 N N N N N N -4.671 98.264 66.887 2.234 -0.913 0.964 HA TY9 23 TY9 HB HB H 0 1 N N N N N N -4.889 98.920 64.549 2.194 -0.799 -1.545 HB TY9 24 TY9 HBA HBA H 0 1 N N N N N N -5.194 97.157 64.104 2.321 0.973 -1.433 HBA TY9 25 TY9 HO3A HO3A H 0 0 N N N N N N -0.324 93.611 62.577 -3.105 -3.430 0.854 HO3A TY9 26 TY9 HO4A HO4A H 0 0 N N N N N N 2.607 97.627 63.674 -4.980 0.426 1.380 HO4A TY9 27 TY9 HXT HXT H 0 1 N Y N N N N -7.958 99.336 66.132 5.547 -1.589 -0.226 HXT TY9 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TY9 C OXT SING N N 1 TY9 O C DOUB N N 2 TY9 C1 C6 DOUB Y N 3 TY9 C1 CB SING N N 4 TY9 C2 C1 SING Y N 5 TY9 C3 C2 DOUB Y N 6 TY9 C3 C4 SING Y N 7 TY9 O3 C3 SING N N 8 TY9 O3 O3A SING N N 9 TY9 C4 C5 DOUB Y N 10 TY9 O4 C4 SING N N 11 TY9 O4 O4A SING N N 12 TY9 C5 O5 SING N N 13 TY9 C5 C6 SING Y N 14 TY9 CA C SING N N 15 TY9 CA N SING N N 16 TY9 CB CA SING N N 17 TY9 N HN SING N N 18 TY9 N HNA SING N N 19 TY9 C2 H2 SING N N 20 TY9 O5 H61 SING N N 21 TY9 C6 H6 SING N N 22 TY9 CA HA SING N N 23 TY9 CB HB SING N N 24 TY9 CB HBA SING N N 25 TY9 O3A HO3A SING N N 26 TY9 O4A HO4A SING N N 27 TY9 OXT HXT SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TY9 SMILES ACDLabs 12.01 "O=C(O)C(N)Cc1cc(O)c(OO)c(OO)c1" TY9 SMILES_CANONICAL CACTVS 3.370 "N[C@@H](Cc1cc(O)c(OO)c(OO)c1)C(O)=O" TY9 SMILES CACTVS 3.370 "N[CH](Cc1cc(O)c(OO)c(OO)c1)C(O)=O" TY9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1c(cc(c(c1O)OO)OO)C[C@@H](C(=O)O)N" TY9 SMILES "OpenEye OEToolkits" 1.7.0 "c1c(cc(c(c1O)OO)OO)CC(C(=O)O)N" TY9 InChI InChI 1.03 "InChI=1S/C9H11NO7/c10-5(9(12)13)1-4-2-6(11)8(17-15)7(3-4)16-14/h2-3,5,11,14-15H,1,10H2,(H,12,13)/t5-/m0/s1" TY9 InChIKey InChI 1.03 RUCJCFAVRFCOCO-YFKPBYRVSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TY9 "SYSTEMATIC NAME" ACDLabs 12.01 "3,4-bis(hydroperoxy)-5-hydroxy-L-phenylalanine" TY9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-2-azanyl-3-(3,4-dihydroperoxy-5-hydroxy-phenyl)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TY9 "Create component" 2010-07-19 RCSB TY9 "Modify aromatic_flag" 2011-06-04 RCSB TY9 "Modify descriptor" 2011-06-04 RCSB TY9 "Modify PCM" 2024-09-27 PDBE # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 TY9 TYR Hydroxylation "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 2 TY9 TYR Hydroperoxylation "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? #