data_TYB # _chem_comp.id TYB _chem_comp.name TYROSINAL _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C9 H11 N O2" _chem_comp.mon_nstd_parent_comp_id TYR _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-12-01 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 165.189 _chem_comp.one_letter_code Y _chem_comp.three_letter_code TYB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1KE1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TYB N N N 0 1 N N N Y Y N 25.951 13.740 12.057 1.130 0.760 1.911 N TYB 1 TYB CA CA C 0 1 N N S Y N N 26.810 13.074 13.039 -0.279 0.388 2.090 CA TYB 2 TYB C C C 0 1 N N N Y N Y 26.778 13.808 14.385 -0.529 0.048 3.537 C TYB 3 TYB O O O 0 1 N N N Y N Y 27.598 13.075 15.362 0.373 0.110 4.336 O TYB 4 TYB CB CB C 0 1 N N N N N N 28.239 13.006 12.511 -0.600 -0.827 1.218 CB TYB 5 TYB CG CG C 0 1 Y N N N N N 28.461 12.021 11.377 -0.350 -0.487 -0.228 CG TYB 6 TYB CD1 CD1 C 0 1 Y N N N N N 29.319 12.322 10.329 0.896 -0.708 -0.783 CD1 TYB 7 TYB CD2 CD2 C 0 1 Y N N N N N 27.800 10.796 11.379 -1.370 0.038 -1.000 CD2 TYB 8 TYB CE1 CE1 C 0 1 Y N N N N N 29.506 11.394 9.304 1.128 -0.397 -2.109 CE1 TYB 9 TYB CE2 CE2 C 0 1 Y N N N N N 27.982 9.875 10.359 -1.141 0.355 -2.325 CE2 TYB 10 TYB CZ CZ C 0 1 Y N N N N N 28.839 10.196 9.324 0.108 0.135 -2.884 CZ TYB 11 TYB OH OH O 0 1 N N N N N N 29.016 9.263 8.307 0.333 0.441 -4.189 OH TYB 12 TYB H H H 0 1 N N N Y Y N 25.972 13.251 11.161 1.679 -0.038 2.192 H TYB 13 TYB H2 HN2 H 0 1 N Y N Y Y N 26.191 14.725 11.953 1.275 0.877 0.919 H2 TYB 14 TYB HA HA H 0 1 N N N Y N N 26.426 12.039 13.200 -0.915 1.223 1.797 HA TYB 15 TYB HC HC H 0 1 N N N Y N Y 26.236 14.740 14.619 -1.516 -0.249 3.859 HC TYB 16 TYB HB2 1HB H 0 1 N N N N N N 28.586 14.022 12.210 0.035 -1.662 1.510 HB2 TYB 17 TYB HB3 2HB H 0 1 N N N N N N 28.947 12.796 13.346 -1.646 -1.103 1.351 HB3 TYB 18 TYB HD1 HD1 H 0 1 N N N N N N 29.847 13.290 10.310 1.689 -1.124 -0.180 HD1 TYB 19 TYB HD2 HD2 H 0 1 N N N N N N 27.115 10.549 12.208 -2.343 0.209 -0.564 HD2 TYB 20 TYB HE1 HE1 H 0 1 N N N N N N 30.190 11.610 8.466 2.102 -0.569 -2.542 HE1 TYB 21 TYB HE2 HE2 H 0 1 N N N N N N 27.455 8.905 10.370 -1.937 0.771 -2.925 HE2 TYB 22 TYB HH HH H 0 1 N N N N N N 28.553 8.433 8.320 0.119 -0.349 -4.702 HH TYB 23 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TYB N CA SING N N 1 TYB N H SING N N 2 TYB N H2 SING N N 3 TYB CA C SING N N 4 TYB CA CB SING N N 5 TYB CA HA SING N N 6 TYB C O DOUB N N 7 TYB C HC SING N N 8 TYB CB CG SING N N 9 TYB CB HB2 SING N N 10 TYB CB HB3 SING N N 11 TYB CG CD1 DOUB Y N 12 TYB CG CD2 SING Y N 13 TYB CD1 CE1 SING Y N 14 TYB CD1 HD1 SING N N 15 TYB CD2 CE2 DOUB Y N 16 TYB CD2 HD2 SING N N 17 TYB CE1 CZ DOUB Y N 18 TYB CE1 HE1 SING N N 19 TYB CE2 CZ SING Y N 20 TYB CE2 HE2 SING N N 21 TYB CZ OH SING N N 22 TYB OH HH SING N N 23 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TYB SMILES ACDLabs 10.04 "O=CC(N)Cc1ccc(O)cc1" TYB SMILES_CANONICAL CACTVS 3.341 "N[C@@H](Cc1ccc(O)cc1)C=O" TYB SMILES CACTVS 3.341 "N[CH](Cc1ccc(O)cc1)C=O" TYB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1C[C@@H](C=O)N)O" TYB SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1CC(C=O)N)O" TYB InChI InChI 1.03 "InChI=1S/C9H11NO2/c10-8(6-11)5-7-1-3-9(12)4-2-7/h1-4,6,8,12H,5,10H2/t8-/m0/s1" TYB InChIKey InChI 1.03 DXGAIOIQACHYRK-QMMMGPOBSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TYB "SYSTEMATIC NAME" ACDLabs 10.04 "(2S)-2-amino-3-(4-hydroxyphenyl)propanal" TYB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-3-(4-hydroxyphenyl)propanal" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TYB "Create component" 2000-12-01 EBI TYB "Modify descriptor" 2011-06-04 RCSB TYB "Modify backbone" 2023-11-03 PDBE TYB "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id TYB _pdbx_chem_comp_pcm.modified_residue_id TYR _pdbx_chem_comp_pcm.type Dehydroxylation _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid backbone" _pdbx_chem_comp_pcm.polypeptide_position C-terminal _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #