data_TZ6 # _chem_comp.id TZ6 _chem_comp.name "9,11-bis(4-fluorophenyl)-3,7-dimethyl-2,4,6,8-tetraoxa-9,11-diaza-1$l^{4},5$l^{4}-diruthenatricyclo[3.3.3.0^{1,5}]undecane" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H18 F2 N2 O4 Ru2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-18 _chem_comp.pdbx_modified_date 2023-06-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 554.473 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TZ6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BPJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TZ6 C11 C1 C 0 1 Y N N 0.618 -23.792 21.789 -4.408 -2.970 0.131 C11 TZ6 1 TZ6 C12 C2 C 0 1 Y N N -0.385 -24.708 21.713 -4.262 -1.726 0.723 C12 TZ6 2 TZ6 C13 C3 C 0 1 Y N N -0.823 -25.131 20.485 -3.248 -0.882 0.317 C13 TZ6 3 TZ6 RU1 RU1 RU 0 0 N N N -0.612 -25.365 14.920 1.286 1.151 -0.013 RU1 TZ6 4 TZ6 RU2 RU2 RU 0 0 N N N 0.839 -24.872 16.636 -1.284 1.151 -0.011 RU2 TZ6 5 TZ6 F1 F1 F 0 1 N N N -6.841 -27.615 14.459 5.395 -3.799 0.531 F1 TZ6 6 TZ6 F2 F2 F 0 1 N N N 1.031 -23.380 22.999 -5.401 -3.794 0.530 F2 TZ6 7 TZ6 O3 O1 O 0 1 N N N -1.176 -23.417 14.987 1.321 2.790 -0.809 O3 TZ6 8 TZ6 O1 O2 O 0 1 N N N -0.020 -27.314 14.929 1.323 0.991 1.801 O1 TZ6 9 TZ6 O2 O3 O 0 1 N N N 1.381 -26.798 17.056 -1.318 0.991 1.803 O2 TZ6 10 TZ6 O4 O4 O 0 1 N N N 0.502 -22.939 16.163 -1.321 2.789 -0.807 O4 TZ6 11 TZ6 N1 N1 N 0 1 N N N -1.989 -25.761 16.355 1.345 -0.427 -1.101 N1 TZ6 12 TZ6 N2 N2 N 0 1 N N N -0.614 -24.981 18.004 -1.345 -0.427 -1.099 N2 TZ6 13 TZ6 C2 C4 C 0 1 Y N N -3.252 -26.249 15.906 2.374 -1.280 -0.690 C2 TZ6 14 TZ6 C3 C5 C 0 1 Y N N -4.150 -25.378 15.299 3.247 -0.884 0.315 C3 TZ6 15 TZ6 C4 C6 C 0 1 Y N N -5.371 -25.837 14.816 4.259 -1.730 0.723 C4 TZ6 16 TZ6 C7 C7 C 0 1 Y N N -3.559 -27.602 15.979 2.521 -2.528 -1.282 C7 TZ6 17 TZ6 C1 C8 C 0 1 N N N -1.714 -25.638 17.643 0.000 -1.079 -0.922 C1 TZ6 18 TZ6 C6 C9 C 0 1 Y N N -4.756 -28.065 15.499 3.538 -3.369 -0.874 C6 TZ6 19 TZ6 C5 C10 C 0 1 Y N N -5.637 -27.187 14.935 4.404 -2.973 0.131 C5 TZ6 20 TZ6 C8 C11 C 0 1 Y N N -0.252 -24.616 19.339 -2.373 -1.280 -0.686 C8 TZ6 21 TZ6 C10 C12 C 0 1 Y N N 1.205 -23.277 20.686 -3.541 -3.367 -0.873 C10 TZ6 22 TZ6 C9 C13 C 0 1 Y N N 0.776 -23.682 19.444 -2.522 -2.528 -1.278 C9 TZ6 23 TZ6 H1 H1 H 0 1 N N N -0.833 -25.099 22.614 -4.943 -1.417 1.502 H1 TZ6 24 TZ6 H2 H2 H 0 1 N N N -1.612 -25.865 20.414 -3.135 0.088 0.778 H2 TZ6 25 TZ6 H7 H7 H 0 1 N N N -3.896 -24.333 15.201 3.134 0.086 0.777 H7 TZ6 26 TZ6 H8 H8 H 0 1 N N N -6.084 -25.163 14.365 4.937 -1.422 1.505 H8 TZ6 27 TZ6 H9 H9 H 0 1 N N N -2.852 -28.291 16.416 1.841 -2.840 -2.061 H9 TZ6 28 TZ6 H10 H10 H 0 1 N N N -2.567 -25.121 18.108 -0.000 -1.948 -1.580 H10 TZ6 29 TZ6 H11 H11 H 0 1 N N N -1.633 -26.655 18.055 0.001 -1.495 0.085 H11 TZ6 30 TZ6 H12 H12 H 0 1 N N N -5.001 -29.115 15.566 3.653 -4.339 -1.335 H12 TZ6 31 TZ6 H13 H13 H 0 1 N N N 2.003 -22.555 20.779 -3.659 -4.336 -1.335 H13 TZ6 32 TZ6 H14 H14 H 0 1 N N N 1.234 -23.278 18.554 -1.843 -2.840 -2.058 H14 TZ6 33 TZ6 C15 C15 C 0 1 N N N ? ? ? 0.002 1.442 2.254 C15 TZ6 34 TZ6 C16 C16 C 0 1 N N N ? ? ? -0.001 2.945 -1.428 C16 TZ6 35 TZ6 C14 C14 C 0 1 N N N ? ? ? -0.001 4.344 -2.047 C14 TZ6 36 TZ6 C17 C17 C 0 1 N N N ? ? ? 0.004 1.254 3.772 C17 TZ6 37 TZ6 H3 H3 H 0 1 N N N ? ? ? 0.002 2.524 2.122 H3 TZ6 38 TZ6 H4 H4 H 0 1 N N N ? ? ? -0.001 2.276 -2.288 H4 TZ6 39 TZ6 H5 H5 H 0 1 N N N ? ? ? 0.795 4.413 -2.788 H5 TZ6 40 TZ6 H6 H6 H 0 1 N N N ? ? ? -0.962 4.528 -2.528 H6 TZ6 41 TZ6 H15 H15 H 0 1 N N N ? ? ? 0.163 5.087 -1.267 H15 TZ6 42 TZ6 H16 H16 H 0 1 N N N ? ? ? 0.801 1.853 4.212 H16 TZ6 43 TZ6 H17 H17 H 0 1 N N N ? ? ? -0.956 1.572 4.179 H17 TZ6 44 TZ6 H18 H18 H 0 1 N N N ? ? ? 0.167 0.202 4.008 H18 TZ6 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TZ6 F1 C5 SING N N 1 TZ6 C4 C5 DOUB Y N 2 TZ6 C4 C3 SING Y N 3 TZ6 RU1 O1 SING N N 4 TZ6 RU1 O3 SING N N 5 TZ6 RU1 N1 SING N N 6 TZ6 RU1 RU2 SING N N 7 TZ6 C5 C6 SING Y N 8 TZ6 C3 C2 DOUB Y N 9 TZ6 C6 C7 DOUB Y N 10 TZ6 C2 C7 SING Y N 11 TZ6 C2 N1 SING N N 12 TZ6 O4 RU2 SING N N 13 TZ6 N1 C1 SING N N 14 TZ6 RU2 O2 SING N N 15 TZ6 RU2 N2 SING N N 16 TZ6 C1 N2 SING N N 17 TZ6 N2 C8 SING N N 18 TZ6 C8 C9 DOUB Y N 19 TZ6 C8 C13 SING Y N 20 TZ6 C9 C10 SING Y N 21 TZ6 C13 C12 DOUB Y N 22 TZ6 C10 C11 DOUB Y N 23 TZ6 C12 C11 SING Y N 24 TZ6 C11 F2 SING N N 25 TZ6 C12 H1 SING N N 26 TZ6 C13 H2 SING N N 27 TZ6 C3 H7 SING N N 28 TZ6 C4 H8 SING N N 29 TZ6 C7 H9 SING N N 30 TZ6 C1 H10 SING N N 31 TZ6 C1 H11 SING N N 32 TZ6 C6 H12 SING N N 33 TZ6 C10 H13 SING N N 34 TZ6 C9 H14 SING N N 35 TZ6 O1 C15 SING N N 36 TZ6 O2 C15 SING N N 37 TZ6 O4 C16 SING N N 38 TZ6 O3 C16 SING N N 39 TZ6 C16 C14 SING N N 40 TZ6 C15 C17 SING N N 41 TZ6 C15 H3 SING N N 42 TZ6 C16 H4 SING N N 43 TZ6 C14 H5 SING N N 44 TZ6 C14 H6 SING N N 45 TZ6 C14 H15 SING N N 46 TZ6 C17 H16 SING N N 47 TZ6 C17 H17 SING N N 48 TZ6 C17 H18 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TZ6 InChI InChI 1.06 "InChI=1S/C13H10F2N2.2C2H4O2.2Ru/c14-10-1-5-12(6-2-10)16-9-17-13-7-3-11(15)4-8-13;2*1-2(3)4;;/h1-8H,9H2;2*2H,1H3;;/q3*-2;2*+3" TZ6 InChIKey InChI 1.06 NOQXZAUOMFZMHS-UHFFFAOYSA-N TZ6 SMILES_CANONICAL CACTVS 3.385 "CC1O[Ru]23OC(C)O[Ru]2(O1)N(CN3c4ccc(F)cc4)c5ccc(F)cc5" TZ6 SMILES CACTVS 3.385 "CC1O[Ru]23OC(C)O[Ru]2(O1)N(CN3c4ccc(F)cc4)c5ccc(F)cc5" TZ6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1O[Ru]23N(CN([Ru]2(O1)OC(O3)C)c4ccc(cc4)F)c5ccc(cc5)F" TZ6 SMILES "OpenEye OEToolkits" 2.0.7 "CC1O[Ru]23N(CN([Ru]2(O1)OC(O3)C)c4ccc(cc4)F)c5ccc(cc5)F" # _pdbx_chem_comp_identifier.comp_id TZ6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "9,11-bis(4-fluorophenyl)-3,7-dimethyl-2,4,6,8-tetraoxa-9,11-diaza-1$l^{4},5$l^{4}-diruthenatricyclo[3.3.3.0^{1,5}]undecane" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TZ6 "Create component" 2023-01-18 PDBE TZ6 "Initial release" 2023-06-28 RCSB #