data_U1B # _chem_comp.id U1B _chem_comp.name "4-nitro-3-[(3S)-3-oxidanylpiperidin-1-yl]benzaldehyde" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H14 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "4-nitro-3-[(3~{S})-3-oxidanylpiperidin-1-yl]benzaldehyde; 3-(3-hydroxypiperidin-1-yl)-4-nitrobenzaldehyde" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-17 _chem_comp.pdbx_modified_date 2021-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 250.251 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U1B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BKH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U1B C10 C1 C 0 1 N N N -20.843 -10.408 -4.119 -3.622 1.933 0.105 C10 U1B 1 U1B C13 C2 C 0 1 Y N N -21.042 -6.621 -4.726 -2.208 -1.542 0.027 C13 U1B 2 U1B C02 C3 C 0 1 N N S -22.970 -9.483 -10.011 2.957 1.177 1.019 C02 U1B 3 U1B C03 C4 C 0 1 N N N -22.428 -8.472 -10.938 3.375 1.897 -0.266 C03 U1B 4 U1B C04 C5 C 0 1 N N N -21.105 -8.101 -10.492 2.852 1.113 -1.474 C04 U1B 5 U1B C05 C6 C 0 1 N N N -21.098 -7.322 -9.189 1.332 0.980 -1.371 C05 U1B 6 U1B C07 C7 C 0 1 Y N N -21.694 -7.798 -6.745 -0.389 0.029 -0.061 C07 U1B 7 U1B C08 C8 C 0 1 Y N N -21.484 -9.034 -6.127 -1.288 1.082 -0.012 C08 U1B 8 U1B C09 C9 C 0 1 Y N N -21.065 -9.063 -4.808 -2.660 0.821 0.052 C09 U1B 9 U1B C12 C10 C 0 1 Y N N -20.833 -7.887 -4.087 -3.113 -0.502 0.077 C12 U1B 10 U1B C14 C11 C 0 1 Y N N -21.454 -6.574 -6.010 -0.852 -1.282 -0.042 C14 U1B 11 U1B C18 C12 C 0 1 N N N -22.939 -9.039 -8.545 1.433 1.042 1.050 C18 U1B 12 U1B N06 N1 N 0 1 N N N -22.141 -7.791 -8.128 0.983 0.284 -0.125 N06 U1B 13 U1B N15 N2 N 1 1 N N N -21.677 -5.257 -6.644 0.112 -2.405 -0.094 N15 U1B 14 U1B O01 O1 O 0 1 N N N -24.321 -9.833 -10.397 3.552 -0.122 1.054 O01 U1B 15 U1B O11 O2 O 0 1 N N N -20.738 -10.448 -2.930 -4.812 1.703 0.161 O11 U1B 16 U1B O16 O3 O 0 1 N N N -22.542 -5.157 -7.788 1.307 -2.179 -0.154 O16 U1B 17 U1B O17 O4 O -1 1 N N N -21.132 -4.260 -6.178 -0.291 -3.554 -0.077 O17 U1B 18 U1B H1 H1 H 0 1 N N N -20.782 -11.315 -4.702 -3.269 2.954 0.100 H1 U1B 19 U1B H2 H2 H 0 1 N N N -20.870 -5.705 -4.180 -2.560 -2.563 0.047 H2 U1B 20 U1B H3 H3 H 0 1 N N N -22.345 -10.384 -10.091 3.289 1.753 1.883 H3 U1B 21 U1B H4 H4 H 0 1 N N N -23.080 -7.586 -10.942 2.953 2.902 -0.275 H4 U1B 22 U1B H5 H5 H 0 1 N N N -22.373 -8.892 -11.953 4.462 1.957 -0.313 H5 U1B 23 U1B H6 H6 H 0 1 N N N -20.515 -9.019 -10.351 3.110 1.643 -2.391 H6 U1B 24 U1B H7 H7 H 0 1 N N N -20.637 -7.480 -11.270 3.305 0.122 -1.487 H7 U1B 25 U1B H8 H8 H 0 1 N N N -20.096 -7.412 -8.744 0.879 1.972 -1.371 H8 U1B 26 U1B H9 H9 H 0 1 N N N -21.302 -6.267 -9.423 0.958 0.410 -2.222 H9 U1B 27 U1B H10 H10 H 0 1 N N N -21.646 -9.953 -6.671 -0.931 2.101 -0.027 H10 U1B 28 U1B H11 H11 H 0 1 N N N -20.500 -7.932 -3.061 -4.171 -0.709 0.135 H11 U1B 29 U1B H12 H12 H 0 1 N N N -23.983 -8.861 -8.247 1.133 0.517 1.957 H12 U1B 30 U1B H13 H13 H 0 1 N N N -22.531 -9.882 -7.968 0.980 2.033 1.038 H13 U1B 31 U1B H14 H14 H 0 1 N N N -24.664 -10.484 -9.796 4.518 -0.112 1.037 H14 U1B 32 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U1B C03 C04 SING N N 1 U1B C03 C02 SING N N 2 U1B C04 C05 SING N N 3 U1B O01 C02 SING N N 4 U1B C02 C18 SING N N 5 U1B C05 N06 SING N N 6 U1B C18 N06 SING N N 7 U1B N06 C07 SING N N 8 U1B O16 N15 DOUB N N 9 U1B C07 C08 DOUB Y N 10 U1B C07 C14 SING Y N 11 U1B N15 O17 SING N N 12 U1B N15 C14 SING N N 13 U1B C08 C09 SING Y N 14 U1B C14 C13 DOUB Y N 15 U1B C09 C10 SING N N 16 U1B C09 C12 DOUB Y N 17 U1B C13 C12 SING Y N 18 U1B C10 O11 DOUB N N 19 U1B C10 H1 SING N N 20 U1B C13 H2 SING N N 21 U1B C02 H3 SING N N 22 U1B C03 H4 SING N N 23 U1B C03 H5 SING N N 24 U1B C04 H6 SING N N 25 U1B C04 H7 SING N N 26 U1B C05 H8 SING N N 27 U1B C05 H9 SING N N 28 U1B C08 H10 SING N N 29 U1B C12 H11 SING N N 30 U1B C18 H12 SING N N 31 U1B C18 H13 SING N N 32 U1B O01 H14 SING N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U1B InChI InChI 1.03 "InChI=1S/C12H14N2O4/c15-8-9-3-4-11(14(17)18)12(6-9)13-5-1-2-10(16)7-13/h3-4,6,8,10,16H,1-2,5,7H2/t10-/m0/s1" U1B InChIKey InChI 1.03 GGOBRMGVXJGMTC-JTQLQIEISA-N U1B SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CCCN(C1)c2cc(C=O)ccc2[N](=O)=O" U1B SMILES CACTVS 3.385 "O[CH]1CCCN(C1)c2cc(C=O)ccc2[N](=O)=O" U1B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C=O)N2CCC[C@@H](C2)O)N(=O)=O" U1B SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C=O)N2CCCC(C2)O)N(=O)=O" # _pdbx_chem_comp_identifier.comp_id U1B _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-nitro-3-[(3~{S})-3-oxidanylpiperidin-1-yl]benzaldehyde" # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 U1B "4-nitro-3-[(3~{S})-3-oxidanylpiperidin-1-yl]benzaldehyde" PDB ? 2 U1B "3-(3-hydroxypiperidin-1-yl)-4-nitrobenzaldehyde" PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U1B "Create component" 2021-01-17 PDBE U1B "Modify synonyms" 2021-01-18 PDBE U1B "Initial release" 2021-06-09 RCSB ##