5-METHYL-3'-O-METHOXYETHYL URIDINE-5'-MONOPHOSPHATE
RNA linking
ATOMN
C13 H21 N2 O10 P
U
0
2004-10-29
2011-06-04
N
REL
396.287
U
U2L
Y
N
RCSB
O3P
O
0
1
N
Y
N
1.198
0.588
-4.548
OP3
U2L
1
P
P
0
1
N
N
N
0.601
1.247
13.043
2.787
0.324
-4.407
P
U2L
2
O1P
O
0
1
N
N
N
-0.516
1.573
13.956
3.659
1.172
-5.286
OP1
U2L
3
O2P
O
0
1
N
N
N
0.879
2.127
11.886
2.921
-1.270
-4.647
OP2
U2L
4
O5*
O
0
1
N
N
N
1.951
1.149
13.918
3.063
0.476
-2.819
O5'
U2L
5
C5*
C
0
1
N
N
N
2.722
2.299
14.247
2.282
-0.292
-1.921
C5'
U2L
6
C4*
C
0
1
N
N
R
4.211
1.959
14.126
2.725
0.023
-0.498
C4'
U2L
7
O4*
O
0
1
N
N
N
4.512
0.959
15.074
2.470
1.422
-0.246
O4'
U2L
8
C3*
C
0
1
N
N
S
4.656
1.434
12.784
1.940
-0.742
0.560
C3'
U2L
9
O3*
O
0
1
N
N
N
4.830
2.505
11.848
2.742
-0.809
1.739
O3'
U2L
10
C2*
C
0
1
N
N
R
5.869
0.545
13.138
0.748
0.163
0.786
C2'
U2L
11
O2*
O
0
1
N
N
N
7.054
1.231
13.565
0.137
-0.058
2.041
O2'
U2L
12
C1*
C
0
1
N
N
R
5.215
-0.054
14.384
1.373
1.543
0.675
C1'
U2L
13
N1
N
0
1
N
N
N
4.581
-1.409
14.372
0.452
2.524
0.177
N1
U2L
14
C2
C
0
1
N
N
N
4.591
-2.126
15.579
-0.300
3.336
1.055
C2
U2L
15
O2
O
0
1
N
N
N
5.086
-1.694
16.618
-0.225
3.269
2.283
O2
U2L
16
N3
N
0
1
N
N
N
4.006
-3.391
15.572
-1.159
4.248
0.431
N3
U2L
17
C4
C
0
1
N
N
N
3.413
-4.007
14.479
-1.338
4.427
-0.932
C4
U2L
18
O4
O
0
1
N
N
N
2.929
-5.131
14.592
-2.112
5.251
-1.413
O4
U2L
19
C5
C
0
1
N
N
N
3.445
-3.197
13.275
-0.514
3.537
-1.792
C5
U2L
20
C6
C
0
1
N
N
N
4.003
-1.970
13.260
0.309
2.663
-1.199
C6
U2L
21
CA*
C
0
1
N
N
N
6.002
3.315
11.899
3.867
-1.652
1.551
CA'
U2L
22
CB*
C
0
1
N
N
N
5.933
4.477
10.896
4.693
-1.667
2.823
CB'
U2L
23
OC*
O
0
1
N
N
N
5.107
5.560
11.310
5.141
-0.346
3.101
OC'
U2L
24
CD*
C
0
1
N
N
N
3.718
5.273
11.339
5.904
-0.296
4.298
CD'
U2L
25
C7
C
0
1
N
N
N
2.869
-3.653
11.965
-0.651
3.669
-3.275
C7
U2L
26
3HOP
H
0
0
N
N
N
0.718
-0.209
-0.586
0.799
0.616
-5.443
HOP3
U2L
27
2HOP
H
0
0
N
N
N
0.923
2.217
12.831
2.886
-1.617
-5.563
HOP2
U2L
28
1H5*
H
0
1
N
N
N
2.493
3.124
13.574
1.229
-0.035
-2.051
H5'
U2L
29
2H5*
H
0
0
N
N
N
2.500
2.605
15.270
2.428
-1.352
-2.133
H5''
U2L
30
H4*
H
0
1
N
N
N
4.834
2.827
14.242
3.804
-0.139
-0.410
H4'
U2L
31
H3*
H
0
1
N
N
N
3.808
0.804
12.510
1.675
-1.764
0.277
H3'
U2L
32
H2*
H
0
1
N
N
N
6.220
-0.166
12.382
-0.000
0.004
-0.000
H2'
U2L
33
2HO*
H
0
0
N
N
N
7.800
0.684
13.783
-0.494
0.669
2.185
HO2'
U2L
34
H1*
H
0
1
N
N
N
6.113
-0.225
14.907
1.754
1.910
1.633
H1'
U2L
35
H3
H
0
1
N
N
N
4.014
-3.904
16.438
-1.709
4.843
1.045
H3
U2L
36
H6
H
0
1
N
N
N
3.941
-1.493
12.308
0.928
1.995
-1.790
H6
U2L
37
1HA*
H
0
0
N
N
N
6.163
3.720
12.897
3.504
-2.655
1.304
HA'1
U2L
38
2HA*
H
0
0
N
N
N
6.861
2.704
11.620
4.455
-1.258
0.717
HA'2
U2L
39
1HB*
H
0
0
N
N
N
6.943
4.869
10.778
5.572
-2.309
2.715
HB'1
U2L
40
2HB*
H
0
0
N
N
N
5.610
4.111
9.924
4.088
-2.009
3.668
HB'2
U2L
41
1HD*
H
0
0
N
N
N
3.399
4.844
10.388
5.249
-0.053
5.138
HD'1
U2L
42
2HD*
H
0
0
N
N
N
3.168
6.198
11.512
6.686
0.461
4.201
HD'2
U2L
43
3HD*
H
0
0
N
N
N
3.490
4.583
12.150
6.363
-1.273
4.468
HD'3
U2L
44
1H7
H
0
1
N
N
N
1.864
-3.270
11.815
-1.057
2.748
-3.690
H71
U2L
45
2H7
H
0
1
N
N
N
2.895
-4.741
11.910
0.324
3.866
-3.719
H72
U2L
46
3H7
H
0
1
N
N
N
3.594
-3.270
11.223
-1.320
4.497
-3.510
H73
U2L
47
sing
N
N
1
sing
N
N
2
doub
N
N
3
sing
N
N
4
sing
N
N
5
sing
N
N
6
sing
N
N
7
sing
N
N
8
sing
N
N
9
sing
N
N
10
sing
N
N
11
sing
N
N
12
sing
N
N
13
sing
N
N
14
sing
N
N
15
sing
N
N
16
sing
N
N
17
sing
N
N
18
sing
N
N
19
sing
N
N
20
sing
N
N
21
sing
N
N
22
sing
N
N
23
sing
N
N
24
sing
N
N
25
sing
N
N
26
doub
N
N
27
sing
N
N
28
sing
N
N
29
sing
N
N
30
doub
N
N
31
sing
N
N
32
doub
N
N
33
sing
N
N
34
sing
N
N
35
sing
N
N
36
sing
N
N
37
sing
N
N
38
sing
N
N
39
sing
N
N
40
sing
N
N
41
sing
N
N
42
sing
N
N
43
sing
N
N
44
sing
N
N
45
sing
N
N
46
sing
N
N
47
sing
N
N
48
O=C1NC(=O)N(C=C1C)C2OC(C(OCCOC)C2O)COP(=O)(O)O
COCCO[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=C(C)C(=O)NC2=O
COCCO[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)N2C=C(C)C(=O)NC2=O
CC1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)OCCOC)O
CC1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)O)OCCOC)O
InChI=1S/C13H21N2O10P/c1-7-5-15(13(18)14-11(7)17)12-9(16)10(23-4-3-22-2)8(25-12)6-24-26(19,20)21/h5,8-10,12,16H,3-4,6H2,1-2H3,(H,14,17,18)(H2,19,20,21)/t8-,9-,10-,12-/m1/s1
KIDCHLZJMPQNHC-DNRKLUKYSA-N
3'-O-(2-methoxyethyl)-5-methyluridine 5'-(dihydrogen phosphate)
[(2R,3S,4R,5R)-4-hydroxy-3-(2-methoxyethoxy)-5-(5-methyl-2,4-dioxo-pyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate
RCSB
RCSB