data_U38 # _chem_comp.id U38 _chem_comp.name Estradiol-17beta-glucuronide _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H32 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-12 _chem_comp.pdbx_modified_date 2023-06-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 448.506 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U38 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8HW2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U38 C1 C1 C 0 1 N N S 133.645 139.110 137.897 4.924 0.603 0.518 C01 U38 1 U38 C2 C2 C 0 1 N N S 133.269 138.999 136.421 5.814 -0.442 -0.160 C02 U38 2 U38 C3 C3 C 0 1 N N S 134.386 139.581 135.557 5.188 -1.828 0.019 C03 U38 3 U38 C4 C4 C 0 1 N N R 135.652 138.806 135.927 3.768 -1.812 -0.555 C04 U38 4 U38 C5 C5 C 0 1 N N R 135.858 138.739 137.441 2.957 -0.715 0.138 C05 U38 5 U38 C6 C6 C 0 1 N N N 132.427 138.776 138.758 5.503 1.977 0.296 C06 U38 6 U38 C7 C7 C 0 1 Y N N 139.674 137.676 144.208 -5.570 -1.415 0.809 C07 U38 7 U38 C8 C8 C 0 1 Y N N 140.655 137.936 144.990 -6.911 -1.608 0.556 C08 U38 8 U38 C9 C9 C 0 1 Y N N 141.628 137.243 145.040 -7.642 -0.610 -0.073 C09 U38 9 U38 C10 C10 C 0 1 Y N N 141.844 136.180 144.356 -7.017 0.567 -0.444 C10 U38 10 U38 C11 C11 C 0 1 Y N N 140.789 135.615 143.290 -5.666 0.761 -0.191 C11 U38 11 U38 C12 C12 C 0 1 N N N 140.913 134.479 142.506 -5.051 2.062 -0.635 C12 U38 12 U38 C13 C13 C 0 1 N N N 140.254 134.472 141.137 -3.687 2.283 0.018 C13 U38 13 U38 C14 C14 C 0 1 N N R 139.403 135.738 140.928 -2.865 1.006 -0.147 C14 U38 14 U38 C15 C15 C 0 1 N N S 138.333 135.591 139.997 -1.434 1.191 0.308 C15 U38 15 U38 C16 C16 C 0 1 N N N 138.786 135.265 138.537 -0.600 2.226 -0.438 C16 U38 16 U38 C17 C17 C 0 1 N N N 137.764 135.819 137.554 0.842 1.662 -0.448 C17 U38 17 U38 C18 C18 C 0 1 N N S 136.985 136.906 138.440 0.770 0.262 0.221 C18 U38 18 U38 C19 C19 C 0 1 N N S 137.749 137.019 139.737 -0.694 -0.145 0.015 C19 U38 19 U38 C20 C20 C 0 1 N N N 136.933 137.456 140.805 -1.233 -1.196 0.967 C20 U38 20 U38 C21 C21 C 0 1 N N N 137.681 137.296 142.054 -2.726 -1.395 0.645 C21 U38 21 U38 C22 C22 C 0 1 N N S 138.645 136.091 142.381 -3.484 -0.072 0.752 C22 U38 22 U38 C23 C23 C 0 1 Y N N 139.675 136.399 143.240 -4.945 -0.229 0.446 C23 U38 23 U38 C24 C24 C 0 1 N N N 138.935 137.979 139.612 -0.926 -0.565 -1.437 C24 U38 24 U38 O1 O1 O 0 1 N N N 134.735 138.260 138.131 3.611 0.544 -0.041 O01 U38 25 U38 O2 O2 O 0 1 N N N 131.689 137.803 138.454 4.896 2.789 -0.360 O02 U38 26 U38 O3 O3 O 0 1 N N N 132.162 139.476 139.771 6.694 2.297 0.826 O03 U38 27 U38 O4 O4 O 0 1 N N N 137.070 138.089 137.757 1.648 -0.657 -0.432 O04 U38 28 U38 O5 O5 O 0 1 N N N 142.633 137.631 145.934 -8.966 -0.789 -0.323 O05 U38 29 U38 O6 O6 O 0 1 N N N 136.766 139.421 135.331 3.147 -3.080 -0.329 O06 U38 30 U38 O7 O7 O 0 1 N N N 134.088 139.365 134.206 5.973 -2.801 -0.673 O07 U38 31 U38 O8 O8 O 0 1 N N N 132.089 139.706 136.190 7.113 -0.423 0.437 O08 U38 32 U38 H1 H1 H 0 1 N N N 133.933 140.152 138.100 4.874 0.399 1.588 H1 U38 33 U38 H2 H2 H 0 1 N N N 133.141 137.936 136.167 5.898 -0.214 -1.222 H2 U38 34 U38 H3 H3 H 0 1 N N N 134.519 140.649 135.783 5.149 -2.077 1.080 H3 U38 35 U38 H4 H4 H 0 1 N N N 135.547 137.778 135.550 3.810 -1.613 -1.626 H4 U38 36 U38 H5 H5 H 0 1 N N N 135.985 139.786 137.753 2.881 -0.936 1.203 H5 U38 37 U38 H6 H6 H 0 1 N N N 138.820 138.338 144.201 -5.001 -2.191 1.298 H6 U38 38 U38 H7 H7 H 0 1 N N N 140.601 138.809 145.624 -7.390 -2.532 0.845 H7 U38 39 U38 H8 H8 H 0 1 N N N 142.771 135.646 144.504 -7.586 1.343 -0.935 H8 U38 40 U38 H9 H9 H 0 1 N N N 140.486 133.641 143.077 -4.930 2.048 -1.718 H9 U38 41 U38 H10 H10 H 0 1 N N N 141.988 134.307 142.351 -5.714 2.882 -0.361 H10 U38 42 U38 H11 H11 H 0 1 N N N 139.607 133.586 141.054 -3.177 3.114 -0.469 H11 U38 43 U38 H12 H12 H 0 1 N N N 141.034 134.431 140.362 -3.818 2.503 1.078 H12 U38 44 U38 H13 H13 H 0 1 N N N 140.053 136.586 140.665 -2.896 0.680 -1.187 H13 U38 45 U38 H14 H14 H 0 1 N N N 137.551 134.896 140.336 -1.411 1.399 1.378 H14 U38 46 U38 H15 H15 H 0 1 N N N 138.862 134.175 138.411 -0.967 2.342 -1.458 H15 U38 47 U38 H16 H16 H 0 1 N N N 139.766 135.726 138.346 -0.630 3.182 0.084 H16 U38 48 U38 H17 H17 H 0 1 N N N 137.082 135.030 137.202 1.198 1.568 -1.474 H17 U38 49 U38 H18 H18 H 0 1 N N N 138.257 136.289 136.691 1.505 2.314 0.120 H18 U38 50 U38 H19 H19 H 0 1 N N N 135.951 136.574 138.615 1.002 0.330 1.284 H19 U38 51 U38 H20 H20 H 0 1 N N N 136.670 138.515 140.662 -0.695 -2.133 0.824 H20 U38 52 U38 H21 H21 H 0 1 N N N 136.015 136.852 140.842 -1.119 -0.856 1.996 H21 U38 53 U38 H22 H22 H 0 1 N N N 138.301 138.200 142.143 -2.826 -1.778 -0.371 H22 U38 54 U38 H23 H23 H 0 1 N N N 136.923 137.291 142.851 -3.150 -2.117 1.343 H23 U38 55 U38 H24 H24 H 0 1 N N N 138.061 135.215 142.700 -3.410 0.270 1.784 H24 U38 56 U38 H25 H25 H 0 1 N N N 139.465 138.035 140.574 -0.302 -1.428 -1.670 H25 U38 57 U38 H26 H26 H 0 1 N N N 139.622 137.613 138.835 -1.975 -0.827 -1.577 H26 U38 58 U38 H27 H27 H 0 1 N N N 138.569 138.979 139.336 -0.667 0.260 -2.100 H27 U38 59 U38 H28 H28 H 0 1 N N N 131.380 139.140 140.193 7.024 3.190 0.656 H28 U38 60 U38 H29 H29 H 0 1 N N N 142.368 138.425 146.383 -9.545 -0.489 0.391 H29 U38 61 U38 H30 H30 H 0 1 N N N 137.553 138.941 135.560 2.243 -3.141 -0.668 H30 U38 62 U38 H31 H31 H 0 1 N N N 133.302 139.845 133.974 6.885 -2.865 -0.360 H31 U38 63 U38 H32 H32 H 0 1 N N N 131.424 139.422 136.806 7.567 0.428 0.364 H32 U38 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U38 O7 C3 SING N N 1 U38 O6 C4 SING N N 2 U38 C3 C4 SING N N 3 U38 C3 C2 SING N N 4 U38 C4 C5 SING N N 5 U38 O8 C2 SING N N 6 U38 C2 C1 SING N N 7 U38 C5 O4 SING N N 8 U38 C5 O1 SING N N 9 U38 C17 C18 SING N N 10 U38 C17 C16 SING N N 11 U38 O4 C18 SING N N 12 U38 C1 O1 SING N N 13 U38 C1 C6 SING N N 14 U38 C18 C19 SING N N 15 U38 O2 C6 DOUB N N 16 U38 C16 C15 SING N N 17 U38 C6 O3 SING N N 18 U38 C24 C19 SING N N 19 U38 C19 C15 SING N N 20 U38 C19 C20 SING N N 21 U38 C15 C14 SING N N 22 U38 C20 C21 SING N N 23 U38 C14 C13 SING N N 24 U38 C14 C22 SING N N 25 U38 C13 C12 SING N N 26 U38 C21 C22 SING N N 27 U38 C22 C23 SING N N 28 U38 C12 C11 SING N N 29 U38 C23 C11 DOUB Y N 30 U38 C23 C7 SING Y N 31 U38 C11 C10 SING Y N 32 U38 C7 C8 DOUB Y N 33 U38 C10 C9 DOUB Y N 34 U38 C8 C9 SING Y N 35 U38 C9 O5 SING N N 36 U38 C1 H1 SING N N 37 U38 C2 H2 SING N N 38 U38 C3 H3 SING N N 39 U38 C4 H4 SING N N 40 U38 C5 H5 SING N N 41 U38 C7 H6 SING N N 42 U38 C8 H7 SING N N 43 U38 C10 H8 SING N N 44 U38 C12 H9 SING N N 45 U38 C12 H10 SING N N 46 U38 C13 H11 SING N N 47 U38 C13 H12 SING N N 48 U38 C14 H13 SING N N 49 U38 C15 H14 SING N N 50 U38 C16 H15 SING N N 51 U38 C16 H16 SING N N 52 U38 C17 H17 SING N N 53 U38 C17 H18 SING N N 54 U38 C18 H19 SING N N 55 U38 C20 H20 SING N N 56 U38 C20 H21 SING N N 57 U38 C21 H22 SING N N 58 U38 C21 H23 SING N N 59 U38 C22 H24 SING N N 60 U38 C24 H25 SING N N 61 U38 C24 H26 SING N N 62 U38 C24 H27 SING N N 63 U38 O3 H28 SING N N 64 U38 O5 H29 SING N N 65 U38 O6 H30 SING N N 66 U38 O7 H31 SING N N 67 U38 O8 H32 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U38 InChI InChI 1.06 "InChI=1S/C24H32O8/c1-24-9-8-14-13-5-3-12(25)10-11(13)2-4-15(14)16(24)6-7-17(24)31-23-20(28)18(26)19(27)21(32-23)22(29)30/h3,5,10,14-21,23,25-28H,2,4,6-9H2,1H3,(H,29,30)/t14-,15-,16+,17+,18+,19+,20-,21+,23-,24+/m1/s1" U38 InChIKey InChI 1.06 MTKNDAQYHASLID-QXYWQCSFSA-N U38 SMILES_CANONICAL CACTVS 3.385 "C[C@]12CC[C@H]3[C@@H](CCc4cc(O)ccc34)[C@@H]1CC[C@@H]2O[C@@H]5O[C@@H]([C@@H](O)[C@H](O)[C@H]5O)C(O)=O" U38 SMILES CACTVS 3.385 "C[C]12CC[CH]3[CH](CCc4cc(O)ccc34)[CH]1CC[CH]2O[CH]5O[CH]([CH](O)[CH](O)[CH]5O)C(O)=O" U38 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@]12CC[C@@H]3c4ccc(cc4CC[C@H]3[C@@H]1CC[C@@H]2O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)C(=O)O)O)O)O)O" U38 SMILES "OpenEye OEToolkits" 2.0.7 "CC12CCC3c4ccc(cc4CCC3C1CCC2OC5C(C(C(C(O5)C(=O)O)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id U38 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S},4~{S},5~{R},6~{R})-6-[[(8~{R},9~{S},13~{S},14~{S},17~{S})-13-methyl-3-oxidanyl-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-17-yl]oxy]-3,4,5-tris(oxidanyl)oxane-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U38 "Create component" 2023-05-12 PDBJ U38 "Initial release" 2023-06-07 RCSB #