data_U3C # _chem_comp.id U3C _chem_comp.name "N-(6-methylpyridin-2-yl)-D-prolinamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H15 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-29 _chem_comp.pdbx_modified_date 2023-11-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 205.256 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U3C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GPF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U3C N1 N1 N 0 1 N N N N N N -3.892 -7.754 0.776 -3.140 0.723 -0.888 N1 U3C 1 U3C C4 C1 C 0 1 Y N N N N N -5.641 -10.787 4.593 2.330 -1.749 -0.114 C4 U3C 2 U3C C5 C2 C 0 1 Y N N N N N -6.193 -10.187 3.470 1.379 -0.739 -0.185 C5 U3C 3 U3C C6 C3 C 0 1 N N N N N N -4.608 -8.296 3.204 -0.900 -0.100 -0.378 C6 U3C 4 U3C C7 C4 C 0 1 N N R N N N -4.196 -7.338 2.143 -2.356 -0.466 -0.508 C7 U3C 5 U3C C8 C5 C 0 1 N N N N N N -3.340 -6.172 2.579 -2.898 -0.955 0.852 C8 U3C 6 U3C C10 C6 C 0 1 N N N N N N -2.756 -6.902 0.373 -4.121 1.003 0.183 C10 U3C 7 U3C N N2 N 0 1 N N N N N N -5.619 -9.102 2.809 0.042 -1.064 -0.410 N U3C 8 U3C C C7 C 0 1 N N N N N N -8.755 -12.492 2.286 3.332 2.338 0.328 C U3C 9 U3C O O1 O 0 1 N N N N N N -4.009 -8.337 4.276 -0.576 1.061 -0.246 O U3C 10 U3C C1 C8 C 0 1 Y N N N N N -7.641 -11.933 3.109 2.984 0.880 0.175 C1 U3C 11 U3C C2 C9 C 0 1 Y N N N N N -7.113 -12.625 4.197 3.982 -0.072 0.252 C2 U3C 12 U3C C3 C10 C 0 1 Y N N N N N -6.106 -12.040 4.941 3.654 -1.413 0.111 C3 U3C 13 U3C C9 C11 C 0 1 N N N N N N -2.157 -6.289 1.649 -4.329 -0.357 0.894 C9 U3C 14 U3C N2 N3 N 0 1 Y N N N N N -7.186 -10.723 2.756 1.730 0.529 -0.040 N2 U3C 15 U3C H1 H1 H 0 1 N N N N N N -4.678 -7.601 0.177 -3.603 0.584 -1.774 H1 U3C 16 U3C H3 H3 H 0 1 N N N N N N -4.876 -10.292 5.173 2.040 -2.783 -0.228 H3 U3C 17 U3C H4 H4 H 0 1 N N N N N N -5.150 -6.817 1.978 -2.480 -1.247 -1.258 H4 U3C 18 U3C H5 H5 H 0 1 N N N N N N -3.033 -6.272 3.631 -2.934 -2.044 0.884 H5 U3C 19 U3C H6 H6 H 0 1 N N N N N N -3.865 -5.216 2.440 -2.291 -0.567 1.671 H6 U3C 20 U3C H7 H7 H 0 1 N N N N N N -1.997 -7.508 -0.143 -3.720 1.739 0.881 H7 U3C 21 U3C H8 H8 H 0 1 N N N N N N -3.106 -6.104 -0.298 -5.059 1.355 -0.244 H8 U3C 22 U3C H9 H9 H 0 1 N N N N N N -6.011 -8.889 1.914 -0.210 -1.983 -0.590 H9 U3C 23 U3C H10 H10 H 0 1 N N N N N N -9.021 -11.777 1.494 3.563 2.761 -0.650 H10 U3C 24 U3C H11 H11 H 0 1 N N N N N N -8.434 -13.441 1.831 2.487 2.870 0.764 H11 U3C 25 U3C H12 H12 H 0 1 N N N N N N -9.631 -12.671 2.927 4.200 2.438 0.980 H12 U3C 26 U3C H13 H13 H 0 1 N N N N N N -7.486 -13.605 4.455 5.006 0.225 0.420 H13 U3C 27 U3C H14 H14 H 0 1 N N N N N N -5.685 -12.559 5.789 4.415 -2.177 0.175 H14 U3C 28 U3C H15 H15 H 0 1 N N N N N N -1.386 -6.947 2.076 -5.030 -0.984 0.342 H15 U3C 29 U3C H16 H16 H 0 1 N N N N N N -1.721 -5.300 1.442 -4.662 -0.214 1.922 H16 U3C 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U3C C10 N1 SING N N 1 U3C C10 C9 SING N N 2 U3C N1 C7 SING N N 3 U3C C9 C8 SING N N 4 U3C C7 C8 SING N N 5 U3C C7 C6 SING N N 6 U3C C C1 SING N N 7 U3C N2 C1 DOUB Y N 8 U3C N2 C5 SING Y N 9 U3C N C6 SING N N 10 U3C N C5 SING N N 11 U3C C1 C2 SING Y N 12 U3C C6 O DOUB N N 13 U3C C5 C4 DOUB Y N 14 U3C C2 C3 DOUB Y N 15 U3C C4 C3 SING Y N 16 U3C N1 H1 SING N N 17 U3C C4 H3 SING N N 18 U3C C7 H4 SING N N 19 U3C C8 H5 SING N N 20 U3C C8 H6 SING N N 21 U3C C10 H7 SING N N 22 U3C C10 H8 SING N N 23 U3C N H9 SING N N 24 U3C C H10 SING N N 25 U3C C H11 SING N N 26 U3C C H12 SING N N 27 U3C C2 H13 SING N N 28 U3C C3 H14 SING N N 29 U3C C9 H15 SING N N 30 U3C C9 H16 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U3C SMILES ACDLabs 12.01 "O=C(Nc1cccc(C)n1)C1CCCN1" U3C InChI InChI 1.06 "InChI=1S/C11H15N3O/c1-8-4-2-6-10(13-8)14-11(15)9-5-3-7-12-9/h2,4,6,9,12H,3,5,7H2,1H3,(H,13,14,15)/t9-/m1/s1" U3C InChIKey InChI 1.06 QILVMVSMHKJUDZ-SECBINFHSA-N U3C SMILES_CANONICAL CACTVS 3.385 "Cc1cccc(NC(=O)[C@H]2CCCN2)n1" U3C SMILES CACTVS 3.385 "Cc1cccc(NC(=O)[CH]2CCCN2)n1" U3C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cccc(n1)NC(=O)[C@H]2CCCN2" U3C SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cccc(n1)NC(=O)C2CCCN2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier U3C "SYSTEMATIC NAME" ACDLabs 12.01 "N-(6-methylpyridin-2-yl)-D-prolinamide" U3C "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-~{N}-(6-methylpyridin-2-yl)pyrrolidine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U3C "Create component" 2023-08-29 RCSB U3C "Initial release" 2023-11-29 RCSB #