data_U3Y # _chem_comp.id U3Y _chem_comp.name "(4S)-1-methyl-N-{(3S,5R)-5-[4-(methylcarbamoyl)-1,3-thiazol-2-yl]-1-[4-(1H-tetrazol-5-yl)benzene-1-carbonyl]pyrrolidin-3-yl}-2,6-dioxohexahydropyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H24 N10 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-15 _chem_comp.pdbx_modified_date 2020-06-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 552.566 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U3Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6WFO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U3Y C19 C1 C 0 1 Y N N 7.972 -11.695 14.677 1.741 2.829 -0.940 C19 U3Y 1 U3Y C21 C2 C 0 1 Y N N 6.154 -10.086 14.823 1.613 3.483 1.385 C21 U3Y 2 U3Y C18 C3 C 0 1 Y N N 8.789 -10.848 15.436 0.689 1.960 -0.754 C18 U3Y 3 U3Y C22 C4 C 0 1 Y N N 6.968 -9.228 15.575 0.554 2.622 1.569 C22 U3Y 4 U3Y C7 C5 C 0 1 Y N N 13.825 -9.740 19.051 -5.399 1.043 -1.286 C7 U3Y 5 U3Y C20 C6 C 0 1 Y N N 6.651 -11.321 14.375 2.209 3.597 0.127 C20 U3Y 6 U3Y C17 C7 C 0 1 Y N N 8.280 -9.617 15.867 0.088 1.850 0.502 C17 U3Y 7 U3Y C6 C8 C 0 1 Y N N 13.952 -8.417 19.402 -5.730 0.221 -0.264 C6 U3Y 8 U3Y C23 C9 C 0 1 Y N N 5.800 -12.215 13.558 3.339 4.531 -0.073 C23 U3Y 9 U3Y C5 C10 C 0 1 Y N N 12.312 -8.179 17.921 -3.591 -0.353 -0.428 C5 U3Y 10 U3Y C13 C11 C 0 1 N N N 10.551 -6.549 10.103 3.808 -2.328 1.243 C13 U3Y 11 U3Y C14 C12 C 0 1 N N N 12.386 -7.830 8.991 4.495 -4.114 -0.103 C14 U3Y 12 U3Y C16 C13 C 0 1 N N N 9.112 -8.717 16.667 -1.041 0.918 0.702 C16 U3Y 13 U3Y C8 C14 C 0 1 N N N 14.939 -7.944 20.349 -7.085 0.156 0.310 C8 U3Y 14 U3Y C10 C15 C 0 1 N N N 12.555 -7.613 12.302 1.463 -3.253 -0.466 C10 U3Y 15 U3Y C12 C16 C 0 1 N N N 11.669 -5.805 10.817 2.622 -3.126 1.723 C12 U3Y 16 U3Y C4 C17 C 0 1 N N N 12.027 -6.731 15.906 -2.035 -2.159 -1.171 C4 U3Y 17 U3Y C2 C18 C 0 1 N N N 10.757 -8.358 14.761 -0.229 -0.574 -1.148 C2 U3Y 18 U3Y C1 C19 C 0 1 N N R 11.286 -7.528 16.994 -2.317 -1.087 -0.097 C1 U3Y 19 U3Y C11 C20 C 0 1 N N S 12.859 -6.677 11.160 2.157 -4.058 0.602 C11 U3Y 20 U3Y C3 C21 C 0 1 N N S 12.148 -7.713 14.739 -0.494 -2.089 -1.335 C3 U3Y 21 U3Y C15 C22 C 0 1 N N N 10.061 -8.475 8.604 5.891 -2.132 0.009 C15 U3Y 22 U3Y C9 C23 C 0 1 N N N 14.088 -7.984 22.553 -8.693 -0.752 1.899 C9 U3Y 23 U3Y N10 N1 N 0 1 Y N N 6.184 -13.437 13.134 3.901 5.337 0.859 N10 U3Y 24 U3Y N2 N2 N 0 1 Y N N 13.091 -7.539 18.764 -4.714 -0.525 0.176 N2 U3Y 25 U3Y N7 N3 N 0 1 Y N N 4.580 -11.870 13.094 4.003 4.740 -1.195 N7 U3Y 26 U3Y N9 N4 N 0 1 Y N N 5.153 -13.861 12.362 4.852 5.984 0.275 N9 U3Y 27 U3Y N8 N5 N 0 1 Y N N 4.176 -12.928 12.341 4.910 5.623 -0.958 N8 U3Y 28 U3Y N6 N6 N 0 1 N N N 13.247 -7.475 10.019 3.315 -4.742 0.022 N6 U3Y 29 U3Y N5 N7 N 0 1 N N N 11.016 -7.633 9.304 4.691 -2.881 0.392 N5 U3Y 30 U3Y N1 N8 N 0 1 N N N 10.394 -8.414 16.189 -1.184 -0.151 -0.107 N1 U3Y 31 U3Y N3 N9 N 0 1 N N N 14.350 -7.253 21.353 -7.345 -0.687 1.329 N3 U3Y 32 U3Y N4 N10 N 0 1 N N N 12.500 -6.988 13.523 0.181 -2.872 -0.297 N4 U3Y 33 U3Y O4 O1 O 0 1 N N N 9.388 -6.191 10.220 3.963 -1.186 1.620 O4 U3Y 34 U3Y O3 O2 O 0 1 N N N 12.767 -8.294 7.931 5.408 -4.675 -0.678 O3 U3Y 35 U3Y O5 O3 O 0 1 N N N 8.603 -8.321 17.708 -1.840 1.114 1.597 O5 U3Y 36 U3Y O1 O4 O 0 1 N N N 16.151 -8.150 20.238 -7.969 0.862 -0.136 O1 U3Y 37 U3Y O2 O5 O 0 1 N N N 12.382 -8.810 12.156 2.058 -2.947 -1.478 O2 U3Y 38 U3Y S1 S1 S 0 1 Y N N 12.568 -9.864 17.888 -3.747 0.817 -1.662 S1 U3Y 39 U3Y H21 H1 H 0 1 N N N 8.358 -12.639 14.322 2.206 2.914 -1.911 H21 U3Y 40 U3Y H22 H2 H 0 1 N N N 5.141 -9.796 14.587 1.973 4.081 2.209 H22 U3Y 41 U3Y H20 H3 H 0 1 N N N 9.798 -11.140 15.686 0.329 1.363 -1.579 H20 U3Y 42 U3Y H23 H4 H 0 1 N N N 6.588 -8.279 15.924 0.084 2.544 2.538 H23 U3Y 43 U3Y H7 H5 H 0 1 N N N 14.413 -10.558 19.439 -6.070 1.726 -1.786 H7 U3Y 44 U3Y H15 H6 H 0 1 N N N 12.013 -4.988 10.166 2.908 -3.717 2.593 H15 U3Y 45 U3Y H14 H7 H 0 1 N N N 11.266 -5.385 11.750 1.812 -2.448 1.992 H14 U3Y 46 U3Y H5 H8 H 0 1 N N N 13.021 -6.420 16.259 -2.341 -3.145 -0.821 H5 U3Y 47 U3Y H6 H9 H 0 1 N N N 11.449 -5.843 15.611 -2.537 -1.910 -2.106 H6 U3Y 48 U3Y H3 H10 H 0 1 N N N 10.036 -7.745 14.201 0.795 -0.406 -0.814 H3 U3Y 49 U3Y H2 H11 H 0 1 N N N 10.791 -9.369 14.329 -0.418 -0.037 -2.077 H2 U3Y 50 U3Y H1 H12 H 0 1 N N N 10.670 -6.831 17.582 -2.404 -1.557 0.882 H1 U3Y 51 U3Y H13 H13 H 0 1 N N N 13.696 -6.026 11.453 1.465 -4.797 1.007 H13 U3Y 52 U3Y H4 H14 H 0 1 N N N 12.910 -8.472 14.972 -0.191 -2.418 -2.329 H4 U3Y 53 U3Y H19 H15 H 0 1 N N N 9.041 -8.226 8.933 6.492 -2.733 -0.673 H19 U3Y 54 U3Y H17 H16 H 0 1 N N N 10.148 -8.306 7.521 5.598 -1.205 -0.484 H17 U3Y 55 U3Y H18 H17 H 0 1 N N N 10.271 -9.531 8.828 6.474 -1.901 0.900 H18 U3Y 56 U3Y H10 H18 H 0 1 N N N 13.611 -7.321 23.290 -8.970 0.227 2.290 H10 U3Y 57 U3Y H11 H19 H 0 1 N N N 13.417 -8.827 22.330 -9.401 -1.048 1.125 H11 U3Y 58 U3Y H9 H20 H 0 1 N N N 15.034 -8.367 22.963 -8.710 -1.484 2.707 H9 U3Y 59 U3Y H24 H21 H 0 1 N N N 7.035 -13.920 13.342 3.639 5.412 1.790 H24 U3Y 60 U3Y H16 H22 H 0 1 N N N 14.194 -7.791 9.968 3.229 -5.662 -0.272 H16 U3Y 61 U3Y H8 H23 H 0 1 N N N 14.112 -6.286 21.260 -6.640 -1.250 1.684 H8 U3Y 62 U3Y H12 H24 H 0 1 N N N 12.706 -6.011 13.580 -0.295 -3.117 0.512 H12 U3Y 63 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U3Y O3 C14 DOUB N N 1 U3Y C15 N5 SING N N 2 U3Y C14 N5 SING N N 3 U3Y C14 N6 SING N N 4 U3Y N5 C13 SING N N 5 U3Y N6 C11 SING N N 6 U3Y C13 O4 DOUB N N 7 U3Y C13 C12 SING N N 8 U3Y C12 C11 SING N N 9 U3Y C11 C10 SING N N 10 U3Y O2 C10 DOUB N N 11 U3Y C10 N4 SING N N 12 U3Y N8 N9 DOUB Y N 13 U3Y N8 N7 SING Y N 14 U3Y N9 N10 SING Y N 15 U3Y N7 C23 DOUB Y N 16 U3Y N10 C23 SING Y N 17 U3Y N4 C3 SING N N 18 U3Y C23 C20 SING N N 19 U3Y C20 C19 DOUB Y N 20 U3Y C20 C21 SING Y N 21 U3Y C19 C18 SING Y N 22 U3Y C3 C2 SING N N 23 U3Y C3 C4 SING N N 24 U3Y C2 N1 SING N N 25 U3Y C21 C22 DOUB Y N 26 U3Y C18 C17 DOUB Y N 27 U3Y C22 C17 SING Y N 28 U3Y C17 C16 SING N N 29 U3Y C4 C1 SING N N 30 U3Y N1 C16 SING N N 31 U3Y N1 C1 SING N N 32 U3Y C16 O5 DOUB N N 33 U3Y C1 C5 SING N N 34 U3Y S1 C5 SING Y N 35 U3Y S1 C7 SING Y N 36 U3Y C5 N2 DOUB Y N 37 U3Y N2 C6 SING Y N 38 U3Y C7 C6 DOUB Y N 39 U3Y C6 C8 SING N N 40 U3Y O1 C8 DOUB N N 41 U3Y C8 N3 SING N N 42 U3Y N3 C9 SING N N 43 U3Y C19 H21 SING N N 44 U3Y C21 H22 SING N N 45 U3Y C18 H20 SING N N 46 U3Y C22 H23 SING N N 47 U3Y C7 H7 SING N N 48 U3Y C12 H15 SING N N 49 U3Y C12 H14 SING N N 50 U3Y C4 H5 SING N N 51 U3Y C4 H6 SING N N 52 U3Y C2 H3 SING N N 53 U3Y C2 H2 SING N N 54 U3Y C1 H1 SING N N 55 U3Y C11 H13 SING N N 56 U3Y C3 H4 SING N N 57 U3Y C15 H19 SING N N 58 U3Y C15 H17 SING N N 59 U3Y C15 H18 SING N N 60 U3Y C9 H10 SING N N 61 U3Y C9 H11 SING N N 62 U3Y C9 H9 SING N N 63 U3Y N10 H24 SING N N 64 U3Y N6 H16 SING N N 65 U3Y N3 H8 SING N N 66 U3Y N4 H12 SING N N 67 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U3Y SMILES ACDLabs 12.01 "c1cc(ccc1c2nnnn2)C(=O)N4CC(CC4c3nc(cs3)C(NC)=O)NC(C5CC(=O)N(C(N5)=O)C)=O" U3Y InChI InChI 1.03 "InChI=1S/C23H24N10O5S/c1-24-19(35)15-10-39-21(26-15)16-7-13(25-20(36)14-8-17(34)32(2)23(38)27-14)9-33(16)22(37)12-5-3-11(4-6-12)18-28-30-31-29-18/h3-6,10,13-14,16H,7-9H2,1-2H3,(H,24,35)(H,25,36)(H,27,38)(H,28,29,30,31)/t13-,14-,16+/m0/s1" U3Y InChIKey InChI 1.03 SYFLGRBSBZONAM-OFQRWUPVSA-N U3Y SMILES_CANONICAL CACTVS 3.385 "CNC(=O)c1csc(n1)[C@H]2C[C@@H](CN2C(=O)c3ccc(cc3)c4[nH]nnn4)NC(=O)[C@@H]5CC(=O)N(C)C(=O)N5" U3Y SMILES CACTVS 3.385 "CNC(=O)c1csc(n1)[CH]2C[CH](CN2C(=O)c3ccc(cc3)c4[nH]nnn4)NC(=O)[CH]5CC(=O)N(C)C(=O)N5" U3Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNC(=O)c1csc(n1)[C@H]2C[C@@H](CN2C(=O)c3ccc(cc3)c4[nH]nnn4)NC(=O)[C@@H]5CC(=O)N(C(=O)N5)C" U3Y SMILES "OpenEye OEToolkits" 2.0.7 "CNC(=O)c1csc(n1)C2CC(CN2C(=O)c3ccc(cc3)c4[nH]nnn4)NC(=O)C5CC(=O)N(C(=O)N5)C" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier U3Y "SYSTEMATIC NAME" ACDLabs 12.01 "(4S)-1-methyl-N-{(3S,5R)-5-[4-(methylcarbamoyl)-1,3-thiazol-2-yl]-1-[4-(1H-tetrazol-5-yl)benzene-1-carbonyl]pyrrolidin-3-yl}-2,6-dioxohexahydropyrimidine-4-carboxamide" U3Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-methyl-2-[(2~{R},4~{S})-4-[[(4~{S})-1-methyl-2,6-bis(oxidanylidene)-1,3-diazinan-4-yl]carbonylamino]-1-[4-(1~{H}-1,2,3,4-tetrazol-5-yl)phenyl]carbonyl-pyrrolidin-2-yl]-1,3-thiazole-4-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U3Y "Create component" 2020-04-15 RCSB U3Y "Initial release" 2020-07-01 RCSB ##