data_U41
#
_chem_comp.id U41
_chem_comp.name "3-chloro-N-(3-{(2S)-1-[(4-fluorophenyl)amino]-1-oxopropan-2-yl}bicyclo[1.1.1]pentan-1-yl)benzamide"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H20 Cl F N2 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-04-15
_chem_comp.pdbx_modified_date 2020-08-21
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 386.847
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code U41
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6WJY
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
U41 C2 C1 C 0 1 N N N 65.221 49.786 13.328 3.336 -0.814 0.627 C2 U41 1
U41 C4 C2 C 0 1 N N N 62.954 50.464 14.029 1.104 -0.852 -0.350 C4 U41 2
U41 C5 C3 C 0 1 N N N 63.142 51.012 15.474 0.614 -2.300 -0.597 C5 U41 3
U41 C6 C4 C 0 1 N N N 61.705 51.456 15.111 -0.729 -1.544 -0.449 C6 U41 4
U41 C7 C5 C 0 1 N N N 62.315 51.833 13.720 -0.002 -0.856 0.733 C7 U41 5
U41 C8 C6 C 0 1 N N N 61.545 50.031 14.508 -0.042 -0.460 -1.308 C8 U41 6
U41 C11 C7 C 0 1 N N N 60.115 51.373 16.992 -3.136 -0.963 -0.314 C11 U41 7
U41 N13 N1 N 0 1 N N N 58.868 50.909 16.717 -4.461 -1.210 -0.334 N13 U41 8
U41 C15 C8 C 0 1 Y N N 56.703 50.001 17.084 -5.093 1.119 -0.445 C15 U41 9
U41 C16 C9 C 0 1 Y N N 55.788 49.266 17.803 -5.990 2.130 -0.163 C16 U41 10
U41 C17 C10 C 0 1 Y N N 56.171 48.634 18.957 -7.164 1.847 0.513 C17 U41 11
U41 C19 C11 C 0 1 Y N N 57.479 48.746 19.419 -7.442 0.549 0.909 C19 U41 12
U41 C21 C12 C 0 1 Y N N 66.065 49.037 12.371 4.717 -0.290 0.689 C21 U41 13
U41 C23 C13 C 0 1 Y N N 67.982 47.651 11.886 6.897 -0.286 1.697 C23 U41 14
U41 C24 C14 C 0 1 Y N N 67.656 47.672 10.541 7.302 0.698 0.813 C24 U41 15
U41 C27 C15 C 0 1 Y N N 65.746 49.063 11.009 5.132 0.698 -0.205 C27 U41 16
U41 O1 O1 O 0 1 N N N 65.753 50.456 14.209 2.975 -1.671 1.410 O1 U41 17
U41 N3 N2 N 0 1 N N N 63.879 49.735 13.167 2.475 -0.337 -0.293 N3 U41 18
U41 C9 C16 C 0 1 N N S 60.750 52.266 15.967 -2.157 -2.090 -0.518 C9 U41 19
U41 C10 C17 C 0 1 N N N 61.464 53.428 16.669 -2.393 -2.730 -1.888 C10 U41 20
U41 O12 O2 O 0 1 N N N 60.723 51.098 18.009 -2.733 0.166 -0.132 O12 U41 21
U41 C14 C18 C 0 1 Y N N 58.035 50.112 17.520 -5.369 -0.183 -0.049 C14 U41 22
U41 F18 F1 F 0 1 N N N 55.276 47.915 19.647 -8.040 2.838 0.789 F18 U41 23
U41 C20 C19 C 0 1 Y N N 58.406 49.481 18.711 -6.547 -0.465 0.629 C20 U41 24
U41 C22 C20 C 0 1 Y N N 67.190 48.328 12.804 5.610 -0.778 1.645 C22 U41 25
U41 C25 C21 C 0 1 Y N N 66.545 48.383 10.109 6.422 1.186 -0.138 C25 U41 26
U41 CL26 CL1 CL 0 0 N N N 66.140 48.442 8.437 6.939 2.421 -1.244 CL26 U41 27
U41 H1 H1 H 0 1 N N N 63.245 50.269 16.279 0.815 -2.691 -1.594 H1 U41 28
U41 H2 H2 H 0 1 N N N 63.889 51.808 15.611 0.838 -3.004 0.205 H2 U41 29
U41 H3 H3 H 0 1 N N N 62.989 52.702 13.691 0.195 -1.501 1.590 H3 U41 30
U41 H4 H4 H 0 1 N N N 61.621 51.878 12.868 -0.388 0.127 1.002 H4 U41 31
U41 H5 H5 H 0 1 N N N 60.774 49.901 13.734 -0.431 0.550 -1.170 H5 U41 32
U41 H6 H6 H 0 1 N N N 61.496 49.192 15.218 0.117 -0.732 -2.351 H6 U41 33
U41 H7 H7 H 0 1 N N N 58.494 51.169 15.827 -4.786 -2.099 -0.546 H7 U41 34
U41 H8 H8 H 0 1 N N N 56.395 50.497 16.176 -4.179 1.339 -0.976 H8 U41 35
U41 H9 H9 H 0 1 N N N 54.768 49.187 17.458 -5.775 3.143 -0.470 H9 U41 36
U41 H10 H10 H 0 1 N N N 57.769 48.255 20.336 -8.358 0.330 1.437 H10 U41 37
U41 H11 H11 H 0 1 N N N 68.853 47.108 12.222 7.588 -0.663 2.437 H11 U41 38
U41 H12 H12 H 0 1 N N N 68.265 47.136 9.829 8.311 1.080 0.858 H12 U41 39
U41 H13 H13 H 0 1 N N N 64.882 49.610 10.663 4.446 1.079 -0.947 H13 U41 40
U41 H14 H14 H 0 1 N N N 63.505 49.175 12.427 2.762 0.347 -0.918 H14 U41 41
U41 H15 H15 H 0 1 N N N 59.963 52.681 15.320 -2.297 -2.839 0.262 H15 U41 42
U41 H16 H16 H 0 1 N N N 60.740 53.990 17.278 -2.252 -1.981 -2.667 H16 U41 43
U41 H17 H17 H 0 1 N N N 62.259 53.031 17.318 -1.684 -3.545 -2.035 H17 U41 44
U41 H18 H18 H 0 1 N N N 61.905 54.096 15.915 -3.410 -3.119 -1.936 H18 U41 45
U41 H19 H19 H 0 1 N N N 59.418 49.569 19.076 -6.764 -1.477 0.938 H19 U41 46
U41 H20 H20 H 0 1 N N N 67.443 48.307 13.854 5.293 -1.539 2.342 H20 U41 47
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
U41 CL26 C25 SING N N 1
U41 C25 C24 DOUB Y N 2
U41 C25 C27 SING Y N 3
U41 C24 C23 SING Y N 4
U41 C27 C21 DOUB Y N 5
U41 C23 C22 DOUB Y N 6
U41 C21 C22 SING Y N 7
U41 C21 C2 SING N N 8
U41 N3 C2 SING N N 9
U41 N3 C4 SING N N 10
U41 C2 O1 DOUB N N 11
U41 C7 C4 SING N N 12
U41 C7 C6 SING N N 13
U41 C4 C8 SING N N 14
U41 C4 C5 SING N N 15
U41 C8 C6 SING N N 16
U41 C6 C5 SING N N 17
U41 C6 C9 SING N N 18
U41 C9 C10 SING N N 19
U41 C9 C11 SING N N 20
U41 N13 C11 SING N N 21
U41 N13 C14 SING N N 22
U41 C11 O12 DOUB N N 23
U41 C15 C14 DOUB Y N 24
U41 C15 C16 SING Y N 25
U41 C14 C20 SING Y N 26
U41 C16 C17 DOUB Y N 27
U41 C20 C19 DOUB Y N 28
U41 C17 C19 SING Y N 29
U41 C17 F18 SING N N 30
U41 C5 H1 SING N N 31
U41 C5 H2 SING N N 32
U41 C7 H3 SING N N 33
U41 C7 H4 SING N N 34
U41 C8 H5 SING N N 35
U41 C8 H6 SING N N 36
U41 N13 H7 SING N N 37
U41 C15 H8 SING N N 38
U41 C16 H9 SING N N 39
U41 C19 H10 SING N N 40
U41 C23 H11 SING N N 41
U41 C24 H12 SING N N 42
U41 C27 H13 SING N N 43
U41 N3 H14 SING N N 44
U41 C9 H15 SING N N 45
U41 C10 H16 SING N N 46
U41 C10 H17 SING N N 47
U41 C10 H18 SING N N 48
U41 C20 H19 SING N N 49
U41 C22 H20 SING N N 50
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
U41 SMILES ACDLabs 12.01 "C(=O)(c1cccc(c1)Cl)NC24CC(C2)(C(C(=O)Nc3ccc(cc3)F)C)C4"
U41 InChI InChI 1.03 "InChI=1S/C21H20ClFN2O2/c1-13(18(26)24-17-7-5-16(23)6-8-17)20-10-21(11-20,12-20)25-19(27)14-3-2-4-15(22)9-14/h2-9,13H,10-12H2,1H3,(H,24,26)(H,25,27)/t13-,20-,21+/m1/s1"
U41 InChIKey InChI 1.03 ORFXTXYARYWSKK-PZVFOTJXSA-N
U41 SMILES_CANONICAL CACTVS 3.385 "C[C@H](C(=O)Nc1ccc(F)cc1)C23CC(C2)(C3)NC(=O)c4cccc(Cl)c4"
U41 SMILES CACTVS 3.385 "C[CH](C(=O)Nc1ccc(F)cc1)C23CC(C2)(C3)NC(=O)c4cccc(Cl)c4"
U41 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](C(=O)Nc1ccc(cc1)F)C23CC(C2)(C3)NC(=O)c4cccc(c4)Cl"
U41 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(=O)Nc1ccc(cc1)F)C23CC(C2)(C3)NC(=O)c4cccc(c4)Cl"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
U41 "SYSTEMATIC NAME" ACDLabs 12.01 "3-chloro-N-(3-{(2S)-1-[(4-fluorophenyl)amino]-1-oxopropan-2-yl}bicyclo[1.1.1]pentan-1-yl)benzamide"
U41 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-chloranyl-~{N}-[3-[(2~{S})-1-[(4-fluorophenyl)amino]-1-oxidanylidene-propan-2-yl]-1-bicyclo[1.1.1]pentanyl]benzamide"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
U41 "Create component" 2020-04-15 RCSB
U41 "Initial release" 2020-08-26 RCSB
##