data_U4V # _chem_comp.id U4V _chem_comp.name "3'-deoxy-3'-(4-{[(4-sulfamoylphenyl)amino]methyl}-1H-1,2,3-triazol-1-yl)thymidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H23 N7 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-21 _chem_comp.pdbx_modified_date 2021-02-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 477.494 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U4V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6WKA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U4V C19 C1 C 0 1 Y N N -1.981 3.216 85.740 -6.811 0.582 -0.047 C19 U4V 1 U4V C18 C2 C 0 1 Y N N -0.652 3.119 85.467 -6.205 -0.319 0.809 C18 U4V 2 U4V C17 C3 C 0 1 Y N N -0.024 4.189 84.770 -4.901 -0.716 0.585 C17 U4V 3 U4V C16 C4 C 0 1 Y N N -0.744 5.277 84.414 -4.199 -0.209 -0.502 C16 U4V 4 U4V C13 C5 C 0 1 Y N N -1.436 7.978 82.772 -0.832 -1.836 -0.300 C13 U4V 5 U4V C14 C6 C 0 1 N N N -0.266 7.657 83.830 -2.238 -1.568 0.170 C14 U4V 6 U4V O01 O1 O 0 1 N N N -6.974 14.388 76.965 8.121 3.111 -0.968 O01 U4V 7 U4V C02 C7 C 0 1 N N N -6.091 13.706 77.278 7.196 2.445 -0.538 C02 U4V 8 U4V C03 C8 C 0 1 N N N -6.311 12.311 77.648 6.474 2.877 0.601 C03 U4V 9 U4V C04 C9 C 0 1 N N N -7.839 12.059 77.623 6.839 4.165 1.293 C04 U4V 10 U4V C05 C10 C 0 1 N N N -5.160 11.446 78.062 5.453 2.120 1.057 C05 U4V 11 U4V N06 N1 N 0 1 N N N -3.806 11.972 78.018 5.135 0.954 0.416 N06 U4V 12 U4V C07 C11 C 0 1 N N R -2.613 11.268 78.487 4.027 0.133 0.911 C07 U4V 13 U4V C08 C12 C 0 1 N N N -2.441 10.972 79.784 2.898 0.089 -0.137 C08 U4V 14 U4V C09 C13 C 0 1 N N S -3.077 9.513 79.963 2.730 -1.418 -0.450 C09 U4V 15 U4V N10 N2 N 0 1 Y N N -2.621 8.798 81.134 1.314 -1.772 -0.573 N10 U4V 16 U4V N11 N3 N 0 1 Y N N -3.445 7.899 81.821 0.826 -2.669 -1.356 N11 U4V 17 U4V N12 N4 N 0 1 Y N N -2.688 7.416 82.806 -0.452 -2.728 -1.222 N12 U4V 18 U4V N15 N5 N 0 1 N N N 0.076 6.331 83.692 -2.883 -0.614 -0.735 N15 U4V 19 U4V S20 S1 S 0 1 N N N -2.717 1.802 86.614 -8.474 1.087 0.243 S20 U4V 20 U4V O21 O2 O 0 1 N N N -4.160 1.962 86.509 -9.078 0.055 1.012 O21 U4V 21 U4V N22 N6 N 0 1 N N N -2.122 0.428 85.879 -8.418 2.424 1.218 N22 U4V 22 U4V O23 O3 O 0 1 N N N -2.245 1.958 87.972 -8.985 1.523 -1.009 O23 U4V 23 U4V C24 C14 C 0 1 Y N N -2.775 4.298 85.367 -6.114 1.093 -1.126 C24 U4V 24 U4V C25 C15 C 0 1 Y N N -2.125 5.370 84.710 -4.812 0.696 -1.359 C25 U4V 25 U4V C26 C16 C 0 1 Y N N -1.401 8.862 81.674 0.295 -1.217 0.123 C26 U4V 26 U4V C27 C17 C 0 1 N N S -2.675 8.856 78.901 3.361 -2.082 0.801 C27 U4V 27 U4V C28 C18 C 0 1 N N N -3.725 7.716 78.508 3.847 -3.495 0.473 C28 U4V 28 U4V O29 O4 O 0 1 N N N -4.864 8.411 77.983 4.316 -4.126 1.667 O29 U4V 29 U4V O30 O5 O 0 1 N N N -2.662 9.923 77.749 4.473 -1.218 1.116 O30 U4V 30 U4V C31 C19 C 0 1 N N N -3.677 13.396 77.692 5.829 0.554 -0.665 C31 U4V 31 U4V N32 N7 N 0 1 N N N -4.806 14.210 77.301 6.847 1.292 -1.144 N32 U4V 32 U4V O33 O6 O 0 1 N N N -2.656 13.897 77.667 5.529 -0.485 -1.219 O33 U4V 33 U4V H1 H1 H 0 1 N N N -0.087 2.251 85.772 -6.751 -0.713 1.653 H1 U4V 34 U4V H2 H2 H 0 1 N N N 1.026 4.132 84.526 -4.427 -1.420 1.253 H2 U4V 35 U4V H3 H3 H 0 1 N N N 0.608 8.292 83.625 -2.803 -2.501 0.177 H3 U4V 36 U4V H4 H4 H 0 1 N N N -0.624 7.846 84.853 -2.212 -1.153 1.178 H4 U4V 37 U4V H5 H5 H 0 1 N N N -8.043 11.014 77.898 7.681 4.628 0.779 H5 U4V 38 U4V H6 H6 H 0 1 N N N -8.333 12.730 78.341 5.985 4.842 1.274 H6 U4V 39 U4V H7 H7 H 0 1 N N N -8.226 12.255 76.612 7.114 3.956 2.327 H7 U4V 40 U4V H8 H8 H 0 1 N N N -5.336 10.433 78.393 4.891 2.434 1.924 H8 U4V 41 U4V H9 H9 H 0 1 N N N -1.732 11.809 78.112 3.648 0.546 1.846 H9 U4V 42 U4V H10 H10 H 0 1 N N N -1.371 10.962 80.040 1.977 0.497 0.277 H10 U4V 43 U4V H11 H11 H 0 1 N N N -2.963 11.702 80.420 3.189 0.635 -1.034 H11 U4V 44 U4V H12 H12 H 0 1 N N N -4.171 9.622 79.992 3.277 -1.691 -1.353 H12 U4V 45 U4V H13 H13 H 0 1 N N N 0.032 6.118 82.716 -2.395 -0.262 -1.496 H13 U4V 46 U4V H14 H14 H 0 1 N N N -2.501 -0.381 86.328 -9.113 3.099 1.156 H14 U4V 47 U4V H15 H15 H 0 1 N N N -2.383 0.427 84.914 -7.691 2.533 1.850 H15 U4V 48 U4V H16 H16 H 0 1 N N N -3.836 4.318 85.569 -6.589 1.801 -1.789 H16 U4V 49 U4V H17 H17 H 0 1 N N N -2.680 6.255 84.436 -4.269 1.092 -2.205 H17 U4V 50 U4V H18 H18 H 0 1 N N N -0.567 9.462 81.341 0.366 -0.434 0.864 H18 U4V 51 U4V H19 H19 H 0 1 N N N -1.675 8.410 79.006 2.647 -2.104 1.624 H19 U4V 52 U4V H20 H20 H 0 1 N N N -4.007 7.130 79.395 3.024 -4.075 0.055 H20 U4V 53 U4V H21 H21 H 0 1 N N N -3.299 7.046 77.747 4.659 -3.441 -0.252 H21 U4V 54 U4V H22 H22 H 0 1 N N N -5.530 7.783 77.729 4.640 -5.027 1.534 H22 U4V 55 U4V H23 H23 H 0 1 N N N -4.652 15.163 77.040 7.335 0.992 -1.927 H23 U4V 56 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U4V O01 C02 DOUB N N 1 U4V C02 N32 SING N N 2 U4V C02 C03 SING N N 3 U4V N32 C31 SING N N 4 U4V C04 C03 SING N N 5 U4V C03 C05 DOUB N N 6 U4V O33 C31 DOUB N N 7 U4V C31 N06 SING N N 8 U4V O30 C07 SING N N 9 U4V O30 C27 SING N N 10 U4V O29 C28 SING N N 11 U4V N06 C05 SING N N 12 U4V N06 C07 SING N N 13 U4V C07 C08 SING N N 14 U4V C28 C27 SING N N 15 U4V C27 C09 SING N N 16 U4V C08 C09 SING N N 17 U4V C09 N10 SING N N 18 U4V N10 C26 SING Y N 19 U4V N10 N11 SING Y N 20 U4V C26 C13 DOUB Y N 21 U4V N11 N12 DOUB Y N 22 U4V C13 N12 SING Y N 23 U4V C13 C14 SING N N 24 U4V N15 C14 SING N N 25 U4V N15 C16 SING N N 26 U4V C16 C25 DOUB Y N 27 U4V C16 C17 SING Y N 28 U4V C25 C24 SING Y N 29 U4V C17 C18 DOUB Y N 30 U4V C24 C19 DOUB Y N 31 U4V C18 C19 SING Y N 32 U4V C19 S20 SING N N 33 U4V N22 S20 SING N N 34 U4V O21 S20 DOUB N N 35 U4V S20 O23 DOUB N N 36 U4V C18 H1 SING N N 37 U4V C17 H2 SING N N 38 U4V C14 H3 SING N N 39 U4V C14 H4 SING N N 40 U4V C04 H5 SING N N 41 U4V C04 H6 SING N N 42 U4V C04 H7 SING N N 43 U4V C05 H8 SING N N 44 U4V C07 H9 SING N N 45 U4V C08 H10 SING N N 46 U4V C08 H11 SING N N 47 U4V C09 H12 SING N N 48 U4V N15 H13 SING N N 49 U4V N22 H14 SING N N 50 U4V N22 H15 SING N N 51 U4V C24 H16 SING N N 52 U4V C25 H17 SING N N 53 U4V C26 H18 SING N N 54 U4V C27 H19 SING N N 55 U4V C28 H20 SING N N 56 U4V C28 H21 SING N N 57 U4V O29 H22 SING N N 58 U4V N32 H23 SING N N 59 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U4V SMILES ACDLabs 12.01 "c1(S(=O)(=O)N)ccc(cc1)NCc4nnn(C3CC(N2C=C(C(=O)NC2=O)C)OC3CO)c4" U4V InChI InChI 1.03 "InChI=1S/C19H23N7O6S/c1-11-8-25(19(29)22-18(11)28)17-6-15(16(10-27)32-17)26-9-13(23-24-26)7-21-12-2-4-14(5-3-12)33(20,30)31/h2-5,8-9,15-17,21,27H,6-7,10H2,1H3,(H2,20,30,31)(H,22,28,29)/t15-,16+,17+/m0/s1" U4V InChIKey InChI 1.03 JHJCKCYGIJXIQG-GVDBMIGSSA-N U4V SMILES_CANONICAL CACTVS 3.385 "CC1=CN([C@H]2C[C@@H]([C@@H](CO)O2)n3cc(CNc4ccc(cc4)[S](N)(=O)=O)nn3)C(=O)NC1=O" U4V SMILES CACTVS 3.385 "CC1=CN([CH]2C[CH]([CH](CO)O2)n3cc(CNc4ccc(cc4)[S](N)(=O)=O)nn3)C(=O)NC1=O" U4V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CO)n3cc(nn3)CNc4ccc(cc4)S(=O)(=O)N" U4V SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CN(C(=O)NC1=O)C2CC(C(O2)CO)n3cc(nn3)CNc4ccc(cc4)S(=O)(=O)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier U4V "SYSTEMATIC NAME" ACDLabs 12.01 "3'-deoxy-3'-(4-{[(4-sulfamoylphenyl)amino]methyl}-1H-1,2,3-triazol-1-yl)thymidine" U4V "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[[1-[(2~{S},3~{S},5~{R})-2-(hydroxymethyl)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]oxolan-3-yl]-1,2,3-triazol-4-yl]methylamino]benzenesulfonamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U4V "Create component" 2020-04-21 RCSB U4V "Initial release" 2021-02-24 RCSB ##