data_U5A # _chem_comp.id U5A _chem_comp.name "[(2Z,3aS,4R,6Z,10aR)-2,6-diiminooctahydro-1H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H17 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-23 _chem_comp.pdbx_modified_date 2020-06-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 267.288 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U5A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6WNB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U5A N N1 N 0 1 N N N -26.953 -29.761 70.728 -5.143 -0.474 0.287 N U5A 1 U5A C C1 C 0 1 N N N -28.219 -29.747 70.290 -3.978 -0.204 -0.335 C U5A 2 U5A O O1 O 0 1 N N N -29.011 -30.668 70.368 -3.956 0.559 -1.280 O U5A 3 U5A C5 C2 C 0 1 N N N -30.018 -24.651 65.571 1.706 2.710 -1.039 C5 U5A 4 U5A N4 N2 N 0 1 N N N -30.390 -27.415 64.548 2.918 -0.020 -0.381 N4 U5A 5 U5A N3 N3 N 0 1 N N N -28.907 -26.563 66.357 0.996 1.078 0.599 N3 U5A 6 U5A C2 C3 C 0 1 N N R -29.647 -28.945 67.641 -0.439 -1.187 -0.000 C2 U5A 7 U5A O1 O2 O 0 1 N N N -28.528 -28.556 69.723 -2.838 -0.780 0.092 O1 U5A 8 U5A C6 C4 C 0 1 N N N -30.985 -25.644 66.200 1.380 1.359 -1.724 C6 U5A 9 U5A C7 C5 C 0 1 N N R -30.246 -27.017 65.960 1.509 0.354 -0.562 C7 U5A 10 U5A C8 C6 C 0 1 N N N -30.863 -28.671 64.386 2.955 -1.374 -0.145 C8 U5A 11 U5A C9 C7 C 0 1 N N S -30.704 -28.331 66.709 0.794 -0.953 -0.853 C9 U5A 12 U5A C1 C8 C 0 1 N N N -29.813 -28.454 69.067 -1.621 -0.443 -0.624 C1 U5A 13 U5A C3 C9 C 0 1 N N N -27.925 -27.488 66.527 0.192 0.561 1.586 C3 U5A 14 U5A C4 C10 C 0 1 N N N -28.631 -25.193 65.896 1.459 2.468 0.465 C4 U5A 15 U5A N1 N4 N 0 1 N N N -28.303 -28.631 67.135 -0.264 -0.728 1.375 N1 U5A 16 U5A N2 N5 N 0 1 N N N -26.737 -27.141 66.075 -0.121 1.241 2.652 N2 U5A 17 U5A N5 N6 N 0 1 N N N -31.147 -29.327 63.309 3.964 -1.994 0.399 N5 U5A 18 U5A N6 N7 N 0 1 N N N -31.048 -29.218 65.610 1.799 -1.991 -0.551 N6 U5A 19 U5A H1 H1 H 0 1 N N N -26.584 -30.581 71.165 -5.964 -0.060 -0.021 H1 U5A 20 U5A H2 H2 H 0 1 N N N -26.377 -28.951 70.618 -5.161 -1.087 1.039 H2 U5A 21 U5A H3 H3 H 0 1 N N N -30.154 -23.650 66.006 2.747 2.981 -1.212 H3 U5A 22 U5A H4 H4 H 0 1 N N N -30.168 -24.601 64.482 1.043 3.492 -1.410 H4 U5A 23 U5A H5 H5 H 0 1 N N N -29.782 -30.037 67.635 -0.662 -2.254 0.012 H5 U5A 24 U5A H6 H6 H 0 1 N N N -31.120 -25.445 67.273 0.366 1.361 -2.122 H6 U5A 25 U5A H7 H7 H 0 1 N N N -31.963 -25.623 65.697 2.102 1.140 -2.510 H7 U5A 26 U5A H8 H8 H 0 1 N N N -31.603 -28.097 67.298 0.525 -0.999 -1.908 H8 U5A 27 U5A H9 H9 H 0 1 N N N -30.150 -27.407 69.065 -1.448 0.632 -0.561 H9 U5A 28 U5A H10 H10 H 0 1 N N N -30.552 -29.076 69.593 -1.722 -0.733 -1.670 H10 U5A 29 U5A H11 H11 H 0 1 N N N -27.990 -25.199 65.002 2.385 2.608 1.023 H11 U5A 30 U5A H12 H12 H 0 1 N N N -28.151 -24.599 66.688 0.694 3.152 0.833 H12 U5A 31 U5A H13 H13 H 0 1 N N N -26.055 -27.856 66.227 -0.692 0.845 3.330 H13 U5A 32 U5A H15 H15 H 0 1 N N N -31.501 -30.241 63.509 3.926 -2.953 0.538 H15 U5A 33 U5A H17 H17 H 0 1 N N N -31.390 -30.148 65.746 1.665 -2.949 -0.627 H17 U5A 34 U5A H18 H18 H 0 1 N N N -30.160 -26.813 63.783 3.681 0.578 -0.420 H18 U5A 35 U5A H19 H19 H 0 1 N N N -27.601 -29.333 67.253 -0.464 -1.312 2.123 H19 U5A 36 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U5A N5 C8 DOUB N N 1 U5A C8 N4 SING N N 2 U5A C8 N6 SING N N 3 U5A N4 C7 SING N N 4 U5A C5 C4 SING N N 5 U5A C5 C6 SING N N 6 U5A N6 C9 SING N N 7 U5A C4 N3 SING N N 8 U5A C7 C6 SING N N 9 U5A C7 N3 SING N N 10 U5A C7 C9 SING N N 11 U5A N2 C3 DOUB N N 12 U5A N3 C3 SING N N 13 U5A C3 N1 SING N N 14 U5A C9 C2 SING N N 15 U5A N1 C2 SING N N 16 U5A C2 C1 SING N N 17 U5A C1 O1 SING N N 18 U5A O1 C SING N N 19 U5A C O DOUB N N 20 U5A C N SING N N 21 U5A N H1 SING N N 22 U5A N H2 SING N N 23 U5A C5 H3 SING N N 24 U5A C5 H4 SING N N 25 U5A C2 H5 SING N N 26 U5A C6 H6 SING N N 27 U5A C6 H7 SING N N 28 U5A C9 H8 SING N N 29 U5A C1 H9 SING N N 30 U5A C1 H10 SING N N 31 U5A C4 H11 SING N N 32 U5A C4 H12 SING N N 33 U5A N2 H13 SING N N 34 U5A N5 H15 SING N N 35 U5A N6 H17 SING N N 36 U5A N4 H18 SING N N 37 U5A N1 H19 SING N N 38 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U5A SMILES ACDLabs 12.01 "NC(=O)OCC2C1C3(N/C(N1)=N)N(/C(N2)=N)CCC3" U5A InChI InChI 1.03 "InChI=1S/C10H17N7O2/c11-7-15-6-5(4-19-9(13)18)14-8(12)17-3-1-2-10(6,17)16-7/h5-6H,1-4H2,(H2,12,14)(H2,13,18)(H3,11,15,16)/t5-,6-,10+/m0/s1" U5A InChIKey InChI 1.03 WSPXQONARWJOKG-JFWOZONXSA-N U5A SMILES_CANONICAL CACTVS 3.385 "NC(=O)OC[C@@H]1NC(=N)N2CCC[C@@]23NC(=N)N[C@@H]13" U5A SMILES CACTVS 3.385 "NC(=O)OC[CH]1NC(=N)N2CCC[C]23NC(=N)N[CH]13" U5A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C\1/N[C@H]2[C@@H](N/C(=N/[H])/N3[C@]2(N1)CCC3)COC(=O)N" U5A SMILES "OpenEye OEToolkits" 2.0.7 "C1CC23C(C(NC(=N)N2C1)COC(=O)N)NC(=N)N3" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier U5A "SYSTEMATIC NAME" ACDLabs 12.01 "[(2Z,3aS,4R,6Z,10aR)-2,6-diiminooctahydro-1H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate" U5A "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(3~{a}~{S},4~{R},10~{a}~{R})-2,6-bis(azanylidene)-1,3,3~{a},4,5,8,9,10-octahydropyrrolo[1,2-c]purin-4-yl]methyl carbamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U5A "Create component" 2020-04-23 RCSB U5A "Initial release" 2020-06-17 RCSB ##